RNA–Protein interactions for RNA: ENST00000494150.1

APOBEC3G-207, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3G, humanhuman

TSL 2

Gene APOBEC3G, Length 2,775 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3G-207ENST00000494150 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
APOBEC3G-207ENST00000494150 LRP1Q07954 4544 aaKnown RBP6.36□□□□□ -1.39
APOBEC3G-207ENST00000494150 C9orf92A6NGG3 77 aa6.35□□□□□ -1.39
APOBEC3G-207ENST00000494150 HSPG2P98160 4391 aa6.33□□□□□ -1.4
APOBEC3G-207ENST00000494150 A0A1B0GU33 70 aa6.33□□□□□ -1.4
APOBEC3G-207ENST00000494150 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
APOBEC3G-207ENST00000494150 LCE2BO14633 110 aa6.31□□□□□ -1.4
APOBEC3G-207ENST00000494150 RPS29P62273 56 aaKnown RBP6.31□□□□□ -1.4
APOBEC3G-207ENST00000494150 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
APOBEC3G-207ENST00000494150 TNXBP22105 4242 aa6.27□□□□□ -1.41
APOBEC3G-207ENST00000494150 K7ERS5 55 aa6.26□□□□□ -1.41
APOBEC3G-207ENST00000494150 EPPK1P58107 5090 aaKnown RBP6.26□□□□□ -1.41
APOBEC3G-207ENST00000494150 Q5VSD8 79 aa6.26□□□□□ -1.41
APOBEC3G-207ENST00000494150 H1FX-AS1Q4G0G2 97 aa6.25□□□□□ -1.41
APOBEC3G-207ENST00000494150 KRTAP17-1Q9BYP8 105 aa6.24□□□□□ -1.41
APOBEC3G-207ENST00000494150 RYR1P21817 5038 aa6.23□□□□□ -1.41
APOBEC3G-207ENST00000494150 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
APOBEC3G-207ENST00000494150 DMBT1Q9UGM3 2413 aaPredicted RBP6.22□□□□□ -1.41
APOBEC3G-207ENST00000494150 KIAA1109Q2LD37 5005 aa6.21□□□□□ -1.41
APOBEC3G-207ENST00000494150 MYCBP2O75592 4640 aa6.2□□□□□ -1.42
APOBEC3G-207ENST00000494150 LUZP6Q538Z0 58 aa6.18□□□□□ -1.42
APOBEC3G-207ENST00000494150 KRTAP10-8P60410 259 aa6.17□□□□□ -1.42
APOBEC3G-207ENST00000494150 TPRXLQ17RH7 258 aa6.17□□□□□ -1.42
APOBEC3G-207ENST00000494150 COX6B2Q6YFQ2 88 aa6.13□□□□□ -1.43
APOBEC3G-207ENST00000494150 KRTAP3-1Q9BYR8 98 aa6.12□□□□□ -1.43
APOBEC3G-207ENST00000494150 A0A0D9SG42 100 aa6.05□□□□□ -1.44
APOBEC3G-207ENST00000494150 RPL37P61927 97 aaKnown RBP6.05□□□□□ -1.44
APOBEC3G-207ENST00000494150 LCE2CQ5TA81 110 aa6.05□□□□□ -1.44
APOBEC3G-207ENST00000494150 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
APOBEC3G-207ENST00000494150 MT1HL1P0DM35 61 aa6.04□□□□□ -1.44
APOBEC3G-207ENST00000494150 XP32Q5T750 250 aa6.01□□□□□ -1.45
APOBEC3G-207ENST00000494150 KRTAP4-5Q9BYR2 181 aa5.98□□□□□ -1.45
APOBEC3G-207ENST00000494150 LPAP08519 4548 aa5.98□□□□□ -1.45
APOBEC3G-207ENST00000494150 SEC61BP60468 96 aaKnown RBP5.96□□□□□ -1.45
APOBEC3G-207ENST00000494150 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
APOBEC3G-207ENST00000494150 ABCA13Q86UQ4 5058 aa5.95□□□□□ -1.46
APOBEC3G-207ENST00000494150 LRP2P98164 4655 aa5.95□□□□□ -1.46
APOBEC3G-207ENST00000494150 BIRC6Q9NR09 4857 aa5.93□□□□□ -1.46
APOBEC3G-207ENST00000494150 KRTAP10-6P60371 365 aaPredicted RBP5.92□□□□□ -1.46
APOBEC3G-207ENST00000494150 LCE2AQ5TA79 106 aaPredicted RBP5.9□□□□□ -1.46
APOBEC3G-207ENST00000494150 S4R3F8 94 aa5.84□□□□□ -1.47
APOBEC3G-207ENST00000494150 HERC2O95714 4834 aa5.84□□□□□ -1.47
APOBEC3G-207ENST00000494150 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
APOBEC3G-207ENST00000494150 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
APOBEC3G-207ENST00000494150 LORP23490 312 aaPredicted RBP5.72□□□□□ -1.49
APOBEC3G-207ENST00000494150 KRTAP12-1P59990 96 aa5.71□□□□□ -1.5
APOBEC3G-207ENST00000494150 MUC17Q685J3 4493 aa5.64□□□□□ -1.51
APOBEC3G-207ENST00000494150 HERC1Q15751 4861 aa5.64□□□□□ -1.51
APOBEC3G-207ENST00000494150 PLAC4Q8WY50 150 aa5.63□□□□□ -1.51
APOBEC3G-207ENST00000494150 KRTAP4-1Q9BYQ7 146 aa5.61□□□□□ -1.51
APOBEC3G-207ENST00000494150 MUC2Q02817 5179 aa5.59□□□□□ -1.52
APOBEC3G-207ENST00000494150 M0QZ58 72 aa5.55□□□□□ -1.52
APOBEC3G-207ENST00000494150 CAMK2N1Q7Z7J9 78 aa5.5□□□□□ -1.53
APOBEC3G-207ENST00000494150 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
APOBEC3G-207ENST00000494150 KRTAP19-2Q3LHN2 52 aa5.43□□□□□ -1.54
APOBEC3G-207ENST00000494150 R4GN34 69 aa5.4□□□□□ -1.54
APOBEC3G-207ENST00000494150 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
APOBEC3G-207ENST00000494150 FLGP20930 4061 aaPredicted RBP5.35□□□□□ -1.55
APOBEC3G-207ENST00000494150 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
APOBEC3G-207ENST00000494150 PRO2289Q9P1D8 64 aa5.35□□□□□ -1.55
APOBEC3G-207ENST00000494150 UBR4Q5T4S7 5183 aa5.32□□□□□ -1.56
APOBEC3G-207ENST00000494150 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
APOBEC3G-207ENST00000494150 RNF213Q63HN8 5207 aa5.3□□□□□ -1.56
APOBEC3G-207ENST00000494150 PP632Q6XCG6 107 aa5.25□□□□□ -1.57
APOBEC3G-207ENST00000494150 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
APOBEC3G-207ENST00000494150 M0R2T5 61 aa5.12□□□□□ -1.59
APOBEC3G-207ENST00000494150 MT1HP80294 61 aa5.07□□□□□ -1.6
APOBEC3G-207ENST00000494150 INE1O15225 51 aa5.07□□□□□ -1.6
APOBEC3G-207ENST00000494150 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
APOBEC3G-207ENST00000494150 TNP1P09430 55 aa5.01□□□□□ -1.61
APOBEC3G-207ENST00000494150 KRTAP10-10P60014 251 aa4.96□□□□□ -1.62
APOBEC3G-207ENST00000494150 KRTAP19-1Q8IUB9 90 aa4.96□□□□□ -1.62
APOBEC3G-207ENST00000494150 MT1FP04733 61 aa4.95□□□□□ -1.62
APOBEC3G-207ENST00000494150 MT2AP02795 61 aa4.94□□□□□ -1.62
APOBEC3G-207ENST00000494150 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
APOBEC3G-207ENST00000494150 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
APOBEC3G-207ENST00000494150 KRTAP19-8Q3LI54 63 aa4.73□□□□□ -1.65
APOBEC3G-207ENST00000494150 MT1BP07438 61 aa4.73□□□□□ -1.65
APOBEC3G-207ENST00000494150 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
APOBEC3G-207ENST00000494150 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
APOBEC3G-207ENST00000494150 LOC100996750A0A140TA64 210 aa4.66□□□□□ -1.66
APOBEC3G-207ENST00000494150 KRTAP4-6Q9BYQ5 205 aa4.66□□□□□ -1.66
APOBEC3G-207ENST00000494150 KRTAP10-5P60370 271 aa4.65□□□□□ -1.66
APOBEC3G-207ENST00000494150 MT1XP80297 61 aa4.65□□□□□ -1.66
APOBEC3G-207ENST00000494150 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.67
APOBEC3G-207ENST00000494150 USH2AO75445 5202 aa4.63□□□□□ -1.67
APOBEC3G-207ENST00000494150 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
APOBEC3G-207ENST00000494150 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
APOBEC3G-207ENST00000494150 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
APOBEC3G-207ENST00000494150 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
APOBEC3G-207ENST00000494150 KRTAP10-12P60413 245 aa4.49□□□□□ -1.69
APOBEC3G-207ENST00000494150 KMT2DO14686 5537 aa4.47□□□□□ -1.69
APOBEC3G-207ENST00000494150 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
APOBEC3G-207ENST00000494150 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
APOBEC3G-207ENST00000494150 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
APOBEC3G-207ENST00000494150 KRTAP4-8Q9BYQ9 185 aa4.37□□□□□ -1.71
APOBEC3G-207ENST00000494150 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.72
APOBEC3G-207ENST00000494150 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
APOBEC3G-207ENST00000494150 SSPOA2VEC9 5147 aa4.31□□□□□ -1.72
APOBEC3G-207ENST00000494150 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms