RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 KRTAP9-3Q9BYQ3 159 aa3.65□□□□□ -1.83
EWSR1-220ENST00000493426 KRTAP1-4P0C5Y4 121 aa3.64□□□□□ -1.83
EWSR1-220ENST00000493426 C20orf166-AS1Q96NR2 134 aa3.64□□□□□ -1.83
EWSR1-220ENST00000493426 DNAH10Q8IVF4 4471 aa3.64□□□□□ -1.83
EWSR1-220ENST00000493426 SACSQ9NZJ4 4579 aa3.62□□□□□ -1.83
EWSR1-220ENST00000493426 VPS13DQ5THJ4 4388 aa3.62□□□□□ -1.83
EWSR1-220ENST00000493426 PLECQ15149 4684 aaKnown RBP3.61□□□□□ -1.83
EWSR1-220ENST00000493426 RPL37P61927 97 aaKnown RBP3.61□□□□□ -1.83
EWSR1-220ENST00000493426 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
EWSR1-220ENST00000493426 DNAH17Q9UFH2 4485 aa3.61□□□□□ -1.83
EWSR1-220ENST00000493426 HYDINQ4G0P3 5121 aa3.6□□□□□ -1.83
EWSR1-220ENST00000493426 EPPK1P58107 5090 aaKnown RBP3.57□□□□□ -1.84
EWSR1-220ENST00000493426 TPRXLQ17RH7 258 aa3.57□□□□□ -1.84
EWSR1-220ENST00000493426 DNAH6Q9C0G6 4158 aa3.56□□□□□ -1.84
EWSR1-220ENST00000493426 KMT2AQ03164 3969 aa3.56□□□□□ -1.84
EWSR1-220ENST00000493426 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
EWSR1-220ENST00000493426 HECTD4Q9Y4D8 3996 aa3.56□□□□□ -1.84
EWSR1-220ENST00000493426 KRTAP10-6P60371 365 aaPredicted RBP3.55□□□□□ -1.84
EWSR1-220ENST00000493426 BIRC6Q9NR09 4857 aa3.55□□□□□ -1.84
EWSR1-220ENST00000493426 FRAS1Q86XX4 4008 aa3.54□□□□□ -1.84
EWSR1-220ENST00000493426 SPINT4Q6UDR6 99 aa3.53□□□□□ -1.84
EWSR1-220ENST00000493426 CRIPTQ9P021 101 aa3.53□□□□□ -1.84
EWSR1-220ENST00000493426 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
EWSR1-220ENST00000493426 FLG2Q5D862 2391 aaPredicted RBP3.51□□□□□ -1.85
EWSR1-220ENST00000493426 DNAH2Q9P225 4427 aa3.49□□□□□ -1.85
EWSR1-220ENST00000493426 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
EWSR1-220ENST00000493426 KRTAP10-1P60331 282 aa3.49□□□□□ -1.85
EWSR1-220ENST00000493426 KRTAP4-5Q9BYR2 181 aa3.48□□□□□ -1.85
EWSR1-220ENST00000493426 KRTAP13-4Q3LI77 160 aa3.47□□□□□ -1.85
EWSR1-220ENST00000493426 PKD1P98161 4303 aa3.47□□□□□ -1.85
EWSR1-220ENST00000493426 PKHD1P08F94 4074 aa3.47□□□□□ -1.85
EWSR1-220ENST00000493426 FAT2Q9NYQ8 4349 aa3.46□□□□□ -1.86
EWSR1-220ENST00000493426 S4R3F8 94 aa3.46□□□□□ -1.86
EWSR1-220ENST00000493426 HERC2O95714 4834 aa3.45□□□□□ -1.86
EWSR1-220ENST00000493426 A0A1B0GVY2 172 aa3.44□□□□□ -1.86
EWSR1-220ENST00000493426 PCLOQ9Y6V0 5065 aa3.44□□□□□ -1.86
EWSR1-220ENST00000493426 DNAH11Q96DT5 4516 aa3.44□□□□□ -1.86
EWSR1-220ENST00000493426 KIAA1109Q2LD37 5005 aa3.43□□□□□ -1.86
EWSR1-220ENST00000493426 C10orf95Q9H7T3 257 aa3.41□□□□□ -1.86
EWSR1-220ENST00000493426 C9orf92A6NGG3 77 aa3.4□□□□□ -1.87
EWSR1-220ENST00000493426 M0QZ58 72 aa3.4□□□□□ -1.87
EWSR1-220ENST00000493426 KRTAP12-1P59990 96 aa3.4□□□□□ -1.87
EWSR1-220ENST00000493426 LRP1BQ9NZR2 4599 aa3.39□□□□□ -1.87
EWSR1-220ENST00000493426 RYR1P21817 5038 aa3.38□□□□□ -1.87
EWSR1-220ENST00000493426 A0A0D9SG42 100 aa3.38□□□□□ -1.87
EWSR1-220ENST00000493426 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
EWSR1-220ENST00000493426 DNAH5Q8TE73 4624 aa3.37□□□□□ -1.87
EWSR1-220ENST00000493426 DYNC1H1Q14204 4646 aaKnown RBP3.37□□□□□ -1.87
EWSR1-220ENST00000493426 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
EWSR1-220ENST00000493426 KRTAP17-1Q9BYP8 105 aa3.36□□□□□ -1.87
EWSR1-220ENST00000493426 KRTAP10-4P60372 401 aaPredicted RBP3.35□□□□□ -1.87
EWSR1-220ENST00000493426 ABCA13Q86UQ4 5058 aa3.35□□□□□ -1.87
EWSR1-220ENST00000493426 HSPG2P98160 4391 aa3.33□□□□□ -1.88
EWSR1-220ENST00000493426 APOBP04114 4563 aaKnown RBP3.32□□□□□ -1.88
EWSR1-220ENST00000493426 VPS13BQ7Z7G8 4022 aa3.32□□□□□ -1.88
EWSR1-220ENST00000493426 PLAC4Q8WY50 150 aa3.3□□□□□ -1.88
EWSR1-220ENST00000493426 KRTAP10-8P60410 259 aa3.28□□□□□ -1.88
EWSR1-220ENST00000493426 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
EWSR1-220ENST00000493426 SMR3BP02814 79 aaPredicted RBP3.27□□□□□ -1.89
EWSR1-220ENST00000493426 PKHD1L1Q86WI1 4243 aa3.27□□□□□ -1.89
EWSR1-220ENST00000493426 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
EWSR1-220ENST00000493426 DMBT1Q9UGM3 2413 aaPredicted RBP3.25□□□□□ -1.89
EWSR1-220ENST00000493426 MYCBP2O75592 4640 aa3.23□□□□□ -1.89
EWSR1-220ENST00000493426 Q5VSD8 79 aa3.22□□□□□ -1.89
EWSR1-220ENST00000493426 FAT1Q14517 4588 aa3.21□□□□□ -1.9
EWSR1-220ENST00000493426 HERC1Q15751 4861 aa3.21□□□□□ -1.9
EWSR1-220ENST00000493426 LRP1Q07954 4544 aaKnown RBP3.18□□□□□ -1.9
EWSR1-220ENST00000493426 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
EWSR1-220ENST00000493426 FAT3Q8TDW7 4589 aa3.14□□□□□ -1.91
EWSR1-220ENST00000493426 SEC61BP60468 96 aaKnown RBP3.13□□□□□ -1.91
EWSR1-220ENST00000493426 MT1HL1P0DM35 61 aa3.11□□□□□ -1.91
EWSR1-220ENST00000493426 R4GN34 69 aa3.11□□□□□ -1.91
EWSR1-220ENST00000493426 HMCN2Q8NDA2 5059 aa3.1□□□□□ -1.91
EWSR1-220ENST00000493426 TNXBP22105 4242 aa3.08□□□□□ -1.92
EWSR1-220ENST00000493426 UBR4Q5T4S7 5183 aa3.05□□□□□ -1.92
EWSR1-220ENST00000493426 CAMK2N1Q7Z7J9 78 aa3.05□□□□□ -1.92
EWSR1-220ENST00000493426 PRO2289Q9P1D8 64 aa3.03□□□□□ -1.92
EWSR1-220ENST00000493426 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
EWSR1-220ENST00000493426 INE1O15225 51 aa2.98□□□□□ -1.93
EWSR1-220ENST00000493426 TNP1P09430 55 aa2.98□□□□□ -1.93
EWSR1-220ENST00000493426 RNF213Q63HN8 5207 aa2.98□□□□□ -1.93
EWSR1-220ENST00000493426 LRP2P98164 4655 aa2.97□□□□□ -1.93
EWSR1-220ENST00000493426 KRTAP19-2Q3LHN2 52 aa2.93□□□□□ -1.94
EWSR1-220ENST00000493426 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
EWSR1-220ENST00000493426 MUC2Q02817 5179 aa2.86□□□□□ -1.95
EWSR1-220ENST00000493426 LPAP08519 4548 aa2.86□□□□□ -1.95
EWSR1-220ENST00000493426 KRTAP9-8Q9BYQ0 159 aa2.84□□□□□ -1.95
EWSR1-220ENST00000493426 KRTAP4-1Q9BYQ7 146 aa2.82□□□□□ -1.96
EWSR1-220ENST00000493426 KRTAP8-1Q8IUC2 63 aa2.79□□□□□ -1.96
EWSR1-220ENST00000493426 SPRR2GQ9BYE4 73 aa2.79□□□□□ -1.96
EWSR1-220ENST00000493426 MUC17Q685J3 4493 aa2.79□□□□□ -1.96
EWSR1-220ENST00000493426 MT3P25713 68 aa2.77□□□□□ -1.97
EWSR1-220ENST00000493426 FAT4Q6V0I7 4981 aa2.75□□□□□ -1.97
EWSR1-220ENST00000493426 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
EWSR1-220ENST00000493426 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
EWSR1-220ENST00000493426 KRTAP10-12P60413 245 aa2.67□□□□□ -1.98
EWSR1-220ENST00000493426 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
EWSR1-220ENST00000493426 KRTAP19-8Q3LI54 63 aa2.65□□□□□ -1.99
EWSR1-220ENST00000493426 KRTAP12-3P60328 96 aa2.63□□□□□ -1.99
EWSR1-220ENST00000493426 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms