RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 KRTAP2-3P0C7H8 128 aa3.39□□□□□ -1.87
VPS52-219ENST00000493379 SPINK7P58062 85 aa3.39□□□□□ -1.87
VPS52-219ENST00000493379 CASC2Q6XLA1 102 aa3.39□□□□□ -1.87
VPS52-219ENST00000493379 Q8N9L7 120 aa3.39□□□□□ -1.87
VPS52-219ENST00000493379 KRTAP2-4Q9BYR9 128 aa3.39□□□□□ -1.87
VPS52-219ENST00000493379 HCG22E2RYF7 251 aa3.38□□□□□ -1.87
VPS52-219ENST00000493379 Q5W150 140 aa3.38□□□□□ -1.87
VPS52-219ENST00000493379 ATP5EP2Q5VTU8 51 aa3.37□□□□□ -1.87
VPS52-219ENST00000493379 WFDC13Q8IUB5 93 aa3.37□□□□□ -1.87
VPS52-219ENST00000493379 LINC00643Q86TS7 51 aa3.35□□□□□ -1.87
VPS52-219ENST00000493379 TP53AIP1Q9HCN2 124 aa3.35□□□□□ -1.87
VPS52-219ENST00000493379 COX6B2Q6YFQ2 88 aa3.34□□□□□ -1.87
VPS52-219ENST00000493379 RBM12B-AS1Q9P1G2 102 aa3.34□□□□□ -1.87
VPS52-219ENST00000493379 MDN1Q9NU22 5596 aa3.34□□□□□ -1.88
VPS52-219ENST00000493379 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
VPS52-219ENST00000493379 J3QR89 54 aa3.32□□□□□ -1.88
VPS52-219ENST00000493379 NDUFS5O43920 106 aa3.32□□□□□ -1.88
VPS52-219ENST00000493379 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
VPS52-219ENST00000493379 C7orf65Q6ZTY9 151 aa3.31□□□□□ -1.88
VPS52-219ENST00000493379 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
VPS52-219ENST00000493379 UQCRQO14949 82 aa3.27□□□□□ -1.89
VPS52-219ENST00000493379 HIST1H4AP62805 103 aaKnown RBP3.27□□□□□ -1.89
VPS52-219ENST00000493379 H1FX-AS1Q4G0G2 97 aa3.27□□□□□ -1.89
VPS52-219ENST00000493379 IMUPQ9GZP8 106 aa3.27□□□□□ -1.89
VPS52-219ENST00000493379 FAM236DA0A1B0GTK5 79 aa3.26□□□□□ -1.89
VPS52-219ENST00000493379 FAM236CP0DP71 79 aa3.26□□□□□ -1.89
VPS52-219ENST00000493379 CYP4F30PQ9H0H9 118 aa3.26□□□□□ -1.89
VPS52-219ENST00000493379 A0A087WVE0 104 aa3.25□□□□□ -1.89
VPS52-219ENST00000493379 TRAV22A0A0B4J277 110 aa3.25□□□□□ -1.89
VPS52-219ENST00000493379 K7ERU9 68 aa3.25□□□□□ -1.89
VPS52-219ENST00000493379 LOC101927531A0A1B0GV80 90 aa3.24□□□□□ -1.89
VPS52-219ENST00000493379 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
VPS52-219ENST00000493379 ATOX1O00244 68 aa3.23□□□□□ -1.89
VPS52-219ENST00000493379 C4orf26Q17RF5 130 aa3.23□□□□□ -1.89
VPS52-219ENST00000493379 MT2AP02795 61 aa3.22□□□□□ -1.89
VPS52-219ENST00000493379 C5orf47Q569G3 176 aa3.22□□□□□ -1.89
VPS52-219ENST00000493379 H3BPC8 53 aa3.2□□□□□ -1.9
VPS52-219ENST00000493379 C1orf64Q8NEQ6 169 aa3.2□□□□□ -1.9
VPS52-219ENST00000493379 H0Y9P7 68 aa3.19□□□□□ -1.9
VPS52-219ENST00000493379 MT-ATP8P03928 68 aa3.19□□□□□ -1.9
VPS52-219ENST00000493379 MT1FP04733 61 aa3.19□□□□□ -1.9
VPS52-219ENST00000493379 MP68P56378 58 aa3.16□□□□□ -1.9
VPS52-219ENST00000493379 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
VPS52-219ENST00000493379 SMIM20Q8N5G0 67 aa3.16□□□□□ -1.9
VPS52-219ENST00000493379 LINC00208Q96KT6 92 aa3.16□□□□□ -1.9
VPS52-219ENST00000493379 A8MUN3 132 aa3.15□□□□□ -1.91
VPS52-219ENST00000493379 KRTAP10-10P60014 251 aa3.15□□□□□ -1.91
VPS52-219ENST00000493379 KLKP1Q107X0 134 aa3.15□□□□□ -1.91
VPS52-219ENST00000493379 SCGB1A1P11684 91 aa3.14□□□□□ -1.91
VPS52-219ENST00000493379 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
VPS52-219ENST00000493379 LCA10Q71F78 164 aa3.14□□□□□ -1.91
VPS52-219ENST00000493379 TRAV7A0A075B6U4 112 aa3.13□□□□□ -1.91
VPS52-219ENST00000493379 CSAG1Q6PB30 78 aa3.13□□□□□ -1.91
VPS52-219ENST00000493379 S4R3F8 94 aa3.13□□□□□ -1.91
VPS52-219ENST00000493379 FAM236AA0A1B0GUQ0 79 aa3.11□□□□□ -1.91
VPS52-219ENST00000493379 FAM236BA0A1B0GV22 79 aa3.11□□□□□ -1.91
VPS52-219ENST00000493379 H0YAA0 97 aa3.1□□□□□ -1.91
VPS52-219ENST00000493379 DMAC1Q96GE9 116 aa3.09□□□□□ -1.91
VPS52-219ENST00000493379 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
VPS52-219ENST00000493379 SERP2Q8N6R1 65 aa3.07□□□□□ -1.92
VPS52-219ENST00000493379 NDUFC1O43677 76 aa3.06□□□□□ -1.92
VPS52-219ENST00000493379 SPRR2EP22531 72 aa3.06□□□□□ -1.92
VPS52-219ENST00000493379 SPRR2BP35325 72 aa3.06□□□□□ -1.92
VPS52-219ENST00000493379 SPRR2AP35326 72 aa3.06□□□□□ -1.92
VPS52-219ENST00000493379 SPRR2GQ9BYE4 73 aa3.06□□□□□ -1.92
VPS52-219ENST00000493379 CAMK2N1Q7Z7J9 78 aa3.04□□□□□ -1.92
VPS52-219ENST00000493379 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
VPS52-219ENST00000493379 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
VPS52-219ENST00000493379 CRIPTQ9P021 101 aa3.03□□□□□ -1.92
VPS52-219ENST00000493379 A8MU10 97 aa3.02□□□□□ -1.93
VPS52-219ENST00000493379 ACYP2P14621 99 aa3.02□□□□□ -1.93
VPS52-219ENST00000493379 COX7CP15954 63 aa3.01□□□□□ -1.93
VPS52-219ENST00000493379 C20orf197Q8N268 126 aa3□□□□□ -1.93
VPS52-219ENST00000493379 SNURFQ9Y675 71 aa3□□□□□ -1.93
VPS52-219ENST00000493379 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
VPS52-219ENST00000493379 MT1BP07438 61 aa2.99□□□□□ -1.93
VPS52-219ENST00000493379 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
VPS52-219ENST00000493379 KRTAP10-5P60370 271 aa2.97□□□□□ -1.93
VPS52-219ENST00000493379 SPRR2DP22532 72 aa2.96□□□□□ -1.94
VPS52-219ENST00000493379 ADM2Q7Z4H4 148 aa2.96□□□□□ -1.94
VPS52-219ENST00000493379 DSTQ03001 7570 aaKnown RBP2.96□□□□□ -1.94
VPS52-219ENST00000493379 H7BZZ5 65 aa2.95□□□□□ -1.94
VPS52-219ENST00000493379 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
VPS52-219ENST00000493379 Q5VV11 94 aa2.94□□□□□ -1.94
VPS52-219ENST00000493379 SPTSSBQ8NFR3 76 aa2.94□□□□□ -1.94
VPS52-219ENST00000493379 P0C880 135 aa2.93□□□□□ -1.94
VPS52-219ENST00000493379 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
VPS52-219ENST00000493379 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
VPS52-219ENST00000493379 CYSTM1Q9H1C7 97 aa2.93□□□□□ -1.94
VPS52-219ENST00000493379 KRTAP10-7P60409 375 aaPredicted RBP2.92□□□□□ -1.94
VPS52-219ENST00000493379 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
VPS52-219ENST00000493379 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
VPS52-219ENST00000493379 ANAPC13Q9BS18 74 aa2.9□□□□□ -1.95
VPS52-219ENST00000493379 A6NN06 94 aa2.88□□□□□ -1.95
VPS52-219ENST00000493379 CHKB-CPT1BH3BT56 60 aa2.88□□□□□ -1.95
VPS52-219ENST00000493379 COA5Q86WW8 74 aa2.88□□□□□ -1.95
VPS52-219ENST00000493379 R4GN34 69 aa2.88□□□□□ -1.95
VPS52-219ENST00000493379 CCDC179H3BU77 68 aa2.86□□□□□ -1.95
VPS52-219ENST00000493379 M0QZ58 72 aa2.86□□□□□ -1.95
VPS52-219ENST00000493379 SMIM26A0A096LP01 95 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms