RNA–Protein interactions for RNA: ENST00000492269.1

NPM1P28-201, Transcript of nucleophosmin 1 pseudogene 28, humanhuman

BASIC

Gene NPM1P28, Length 840 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P28-201ENST00000492269 TENM4Q6N022 2769 aa2.73□□□□□ -1.97
NPM1P28-201ENST00000492269 SRRM2Q9UQ35 2752 aaKnown RBP2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 FBN2P35556 2912 aa2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 ABCA12Q86UK0 2595 aa2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 ZNF292O60281 2723 aa2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 HIVEP1P15822 2718 aa2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 CFAP46Q8IYW2 2715 aa2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 FRAS1Q86XX4 4008 aa2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 ZANQ9Y493 2812 aa2.7□□□□□ -1.98
NPM1P28-201ENST00000492269 SETD2Q9BYW2 2564 aaPredicted RBP2.7□□□□□ -1.98
NPM1P28-201ENST00000492269 HECTD1Q9ULT8 2610 aa2.7□□□□□ -1.98
NPM1P28-201ENST00000492269 MUC3AQ02505 3323 aa2.69□□□□□ -1.98
NPM1P28-201ENST00000492269 FASNP49327 2511 aaKnown RBP2.69□□□□□ -1.98
NPM1P28-201ENST00000492269 VWFP04275 2813 aa2.69□□□□□ -1.98
NPM1P28-201ENST00000492269 DNAH3Q8TD57 4116 aa2.69□□□□□ -1.98
NPM1P28-201ENST00000492269 FAM208BQ5VWN6 2430 aa2.69□□□□□ -1.98
NPM1P28-201ENST00000492269 CSMD2Q7Z408 3487 aa2.69□□□□□ -1.98
NPM1P28-201ENST00000492269 ANK2Q01484 3957 aa2.68□□□□□ -1.98
NPM1P28-201ENST00000492269 R4GN34 69 aa2.68□□□□□ -1.98
NPM1P28-201ENST00000492269 FBN1P35555 2871 aaKnown RBP2.68□□□□□ -1.98
NPM1P28-201ENST00000492269 CMYA5Q8N3K9 4069 aa2.68□□□□□ -1.98
NPM1P28-201ENST00000492269 BDP1A6H8Y1 2624 aa2.67□□□□□ -1.98
NPM1P28-201ENST00000492269 TGP01266 2768 aa2.66□□□□□ -1.98
NPM1P28-201ENST00000492269 ITPR3Q14573 2671 aa2.66□□□□□ -1.98
NPM1P28-201ENST00000492269 DNAH8Q96JB1 4490 aa2.66□□□□□ -1.98
NPM1P28-201ENST00000492269 CACNA1AO00555 2505 aa2.65□□□□□ -1.99
NPM1P28-201ENST00000492269 SMR3AQ99954 134 aa2.64□□□□□ -1.99
NPM1P28-201ENST00000492269 DMBT1Q9UGM3 2413 aaPredicted RBP2.64□□□□□ -1.99
NPM1P28-201ENST00000492269 BAHCC1Q9P281 2608 aa2.64□□□□□ -1.99
NPM1P28-201ENST00000492269 DYNC2H1Q8NCM8 4307 aaKnown RBP2.63□□□□□ -1.99
NPM1P28-201ENST00000492269 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
NPM1P28-201ENST00000492269 DNAH7Q8WXX0 4024 aa2.63□□□□□ -1.99
NPM1P28-201ENST00000492269 PRKDCP78527 4128 aaKnown RBP2.62□□□□□ -1.99
NPM1P28-201ENST00000492269 NIPBLQ6KC79 2804 aaeCLIP2.62□□□□□ -1.99
NPM1P28-201ENST00000492269 PKD1L1Q8TDX9 2849 aa2.61□□□□□ -1.99
NPM1P28-201ENST00000492269 Q5VSD8 79 aa2.61□□□□□ -1.99
NPM1P28-201ENST00000492269 MYO18BQ8IUG5 2567 aa2.6□□□□□ -1.99
NPM1P28-201ENST00000492269 STAB2Q8WWQ8 2551 aa2.6□□□□□ -1.99
NPM1P28-201ENST00000492269 CUBNO60494 3623 aa2.6□□□□□ -1.99
NPM1P28-201ENST00000492269 NBEAL1Q6ZS30 2694 aa2.6□□□□□ -1.99
NPM1P28-201ENST00000492269 TENM3Q9P273 2699 aa2.6□□□□□ -1.99
NPM1P28-201ENST00000492269 FLNAP21333 2647 aaKnown RBP2.59□□□□□ -1.99
NPM1P28-201ENST00000492269 DNAH6Q9C0G6 4158 aa2.59□□□□□ -1.99
NPM1P28-201ENST00000492269 POLQO75417 2590 aa2.59□□□□□ -1.99
NPM1P28-201ENST00000492269 PDZD2O15018 2839 aa2.59□□□□□ -2
NPM1P28-201ENST00000492269 DNAH10Q8IVF4 4471 aa2.58□□□□□ -2
NPM1P28-201ENST00000492269 ITPR2Q14571 2701 aa2.58□□□□□ -2
NPM1P28-201ENST00000492269 LYSTQ99698 3801 aa2.58□□□□□ -2
NPM1P28-201ENST00000492269 DNAH17Q9UFH2 4485 aa2.57□□□□□ -2
NPM1P28-201ENST00000492269 CSMD3Q7Z407 3707 aa2.56□□□□□ -2
NPM1P28-201ENST00000492269 C9orf92A6NGG3 77 aa2.56□□□□□ -2
NPM1P28-201ENST00000492269 DNAH9Q9NYC9 4486 aa2.55□□□□□ -2
NPM1P28-201ENST00000492269 DNAH11Q96DT5 4516 aa2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 ATRQ13535 2644 aa2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 HUWE1Q7Z6Z7 4374 aaKnown RBP2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 TEP1Q99973 2627 aaKnown RBP2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 COL7A1Q02388 2944 aa2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 DNAH2Q9P225 4427 aa2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 HECTD4Q9Y4D8 3996 aa2.51□□□□□ -2.01
NPM1P28-201ENST00000492269 ZNF469Q96JG9 3925 aaPredicted RBP2.5□□□□□ -2.01
NPM1P28-201ENST00000492269 SACSQ9NZJ4 4579 aa2.5□□□□□ -2.01
NPM1P28-201ENST00000492269 MAST4O15021 2626 aa2.5□□□□□ -2.01
NPM1P28-201ENST00000492269 NSD1Q96L73 2696 aaPredicted RBP2.49□□□□□ -2.01
NPM1P28-201ENST00000492269 NOTCH1P46531 2555 aa2.48□□□□□ -2.01
NPM1P28-201ENST00000492269 TNP1P09430 55 aa2.48□□□□□ -2.01
NPM1P28-201ENST00000492269 FBN3Q75N90 2809 aa2.48□□□□□ -2.01
NPM1P28-201ENST00000492269 FLNBO75369 2602 aaKnown RBP2.47□□□□□ -2.01
NPM1P28-201ENST00000492269 MGAM2Q2M2H8 2515 aa2.46□□□□□ -2.01
NPM1P28-201ENST00000492269 FLNCQ14315 2725 aa2.46□□□□□ -2.02
NPM1P28-201ENST00000492269 IGSF10Q6WRI0 2623 aa2.43□□□□□ -2.02
NPM1P28-201ENST00000492269 USP24Q9UPU5 2620 aa2.43□□□□□ -2.02
NPM1P28-201ENST00000492269 PKHD1L1Q86WI1 4243 aa2.42□□□□□ -2.02
NPM1P28-201ENST00000492269 STAB1Q9NY15 2570 aa2.41□□□□□ -2.02
NPM1P28-201ENST00000492269 CRCT1Q9UGL9 99 aa2.41□□□□□ -2.02
NPM1P28-201ENST00000492269 KMT2AQ03164 3969 aa2.41□□□□□ -2.02
NPM1P28-201ENST00000492269 KRTAP6-3Q3LI67 103 aa2.39□□□□□ -2.03
NPM1P28-201ENST00000492269 TENM1Q9UKZ4 2725 aa2.38□□□□□ -2.03
NPM1P28-201ENST00000492269 MYCBP2O75592 4640 aa2.37□□□□□ -2.03
NPM1P28-201ENST00000492269 J3QKU1 62 aa2.36□□□□□ -2.03
NPM1P28-201ENST00000492269 PKHD1P08F94 4074 aa2.34□□□□□ -2.03
NPM1P28-201ENST00000492269 VPS13BQ7Z7G8 4022 aa2.34□□□□□ -2.03
NPM1P28-201ENST00000492269 PKD1P98161 4303 aa2.34□□□□□ -2.03
NPM1P28-201ENST00000492269 LRP1Q07954 4544 aaKnown RBP2.34□□□□□ -2.04
NPM1P28-201ENST00000492269 KRTAP10-4P60372 401 aaPredicted RBP2.33□□□□□ -2.04
NPM1P28-201ENST00000492269 PLECQ15149 4684 aaKnown RBP2.33□□□□□ -2.04
NPM1P28-201ENST00000492269 DNAH5Q8TE73 4624 aa2.31□□□□□ -2.04
NPM1P28-201ENST00000492269 KRTAP4-1Q9BYQ7 146 aa2.31□□□□□ -2.04
NPM1P28-201ENST00000492269 TNXBP22105 4242 aa2.31□□□□□ -2.04
NPM1P28-201ENST00000492269 APOBP04114 4563 aaKnown RBP2.3□□□□□ -2.04
NPM1P28-201ENST00000492269 HSPG2P98160 4391 aa2.28□□□□□ -2.04
NPM1P28-201ENST00000492269 FAT2Q9NYQ8 4349 aa2.28□□□□□ -2.05
NPM1P28-201ENST00000492269 KRTAP8-1Q8IUC2 63 aa2.27□□□□□ -2.05
NPM1P28-201ENST00000492269 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
NPM1P28-201ENST00000492269 LRP1BQ9NZR2 4599 aa2.26□□□□□ -2.05
NPM1P28-201ENST00000492269 DYNC1H1Q14204 4646 aaKnown RBP2.25□□□□□ -2.05
NPM1P28-201ENST00000492269 STARD9Q9P2P6 4700 aa2.24□□□□□ -2.05
NPM1P28-201ENST00000492269 FCGBPQ9Y6R7 5405 aaPredicted RBP2.18□□□□□ -2.06
NPM1P28-201ENST00000492269 FAT3Q8TDW7 4589 aa2.18□□□□□ -2.06
NPM1P28-201ENST00000492269 FAT1Q14517 4588 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms