RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 A0A1B0GVY2 172 aa5.75□□□□□ -1.49
VPS72-205ENST00000491094 RPL37P61927 97 aaKnown RBP5.74□□□□□ -1.49
VPS72-205ENST00000491094 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
VPS72-205ENST00000491094 SPINT4Q6UDR6 99 aa5.73□□□□□ -1.49
VPS72-205ENST00000491094 S4R3F8 94 aa5.73□□□□□ -1.49
VPS72-205ENST00000491094 Q5VSD8 79 aa5.73□□□□□ -1.49
VPS72-205ENST00000491094 P0C880 135 aa5.72□□□□□ -1.49
VPS72-205ENST00000491094 C10orf95Q9H7T3 257 aa5.72□□□□□ -1.49
VPS72-205ENST00000491094 ROMO1P60602 79 aa5.71□□□□□ -1.49
VPS72-205ENST00000491094 KRTAP10-6P60371 365 aaPredicted RBP5.7□□□□□ -1.5
VPS72-205ENST00000491094 KRTAP3-3Q9BYR6 98 aa5.69□□□□□ -1.5
VPS72-205ENST00000491094 HSPG2P98160 4391 aa5.69□□□□□ -1.5
VPS72-205ENST00000491094 XP32Q5T750 250 aa5.68□□□□□ -1.5
VPS72-205ENST00000491094 KMT2CQ8NEZ4 4911 aaKnown RBP5.68□□□□□ -1.5
VPS72-205ENST00000491094 FAT3Q8TDW7 4589 aa5.68□□□□□ -1.5
VPS72-205ENST00000491094 J3QL48 77 aa5.65□□□□□ -1.51
VPS72-205ENST00000491094 KRTAP3-2Q9BYR7 98 aa5.63□□□□□ -1.51
VPS72-205ENST00000491094 PKHD1L1Q86WI1 4243 aa5.63□□□□□ -1.51
VPS72-205ENST00000491094 TPRXLQ17RH7 258 aa5.6□□□□□ -1.51
VPS72-205ENST00000491094 KRTAP12-2P59991 146 aa5.58□□□□□ -1.52
VPS72-205ENST00000491094 KIAA1109Q2LD37 5005 aa5.57□□□□□ -1.52
VPS72-205ENST00000491094 LRP2P98164 4655 aa5.55□□□□□ -1.52
VPS72-205ENST00000491094 RYR2Q92736 4967 aa5.55□□□□□ -1.52
VPS72-205ENST00000491094 LPAP08519 4548 aa5.54□□□□□ -1.52
VPS72-205ENST00000491094 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
VPS72-205ENST00000491094 RYR3Q15413 4870 aa5.49□□□□□ -1.53
VPS72-205ENST00000491094 RYR1P21817 5038 aa5.49□□□□□ -1.53
VPS72-205ENST00000491094 TNXBP22105 4242 aa5.49□□□□□ -1.53
VPS72-205ENST00000491094 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
VPS72-205ENST00000491094 M0QZ58 72 aa5.47□□□□□ -1.53
VPS72-205ENST00000491094 MT1HL1P0DM35 61 aa5.45□□□□□ -1.54
VPS72-205ENST00000491094 NDUFAF8A1L188 74 aa5.44□□□□□ -1.54
VPS72-205ENST00000491094 R4GN34 69 aa5.43□□□□□ -1.54
VPS72-205ENST00000491094 KRTAP4-5Q9BYR2 181 aa5.33□□□□□ -1.56
VPS72-205ENST00000491094 ABCA13Q86UQ4 5058 aa5.31□□□□□ -1.56
VPS72-205ENST00000491094 LORP23490 312 aaPredicted RBP5.31□□□□□ -1.56
VPS72-205ENST00000491094 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
VPS72-205ENST00000491094 EPPK1P58107 5090 aaKnown RBP5.25□□□□□ -1.57
VPS72-205ENST00000491094 CAMK2N1Q7Z7J9 78 aa5.24□□□□□ -1.57
VPS72-205ENST00000491094 SEC61BP60468 96 aaKnown RBP5.23□□□□□ -1.57
VPS72-205ENST00000491094 MUC2Q02817 5179 aa5.2□□□□□ -1.58
VPS72-205ENST00000491094 KRTAP4-1Q9BYQ7 146 aa5.19□□□□□ -1.58
VPS72-205ENST00000491094 PLAC4Q8WY50 150 aa5.14□□□□□ -1.59
VPS72-205ENST00000491094 LUZP6Q538Z0 58 aa5.08□□□□□ -1.6
VPS72-205ENST00000491094 HERC2O95714 4834 aa5.05□□□□□ -1.6
VPS72-205ENST00000491094 A0A0A0MQY5 61 aa5.01□□□□□ -1.61
VPS72-205ENST00000491094 MUC17Q685J3 4493 aa5□□□□□ -1.61
VPS72-205ENST00000491094 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
VPS72-205ENST00000491094 M0R2T5 61 aa4.93□□□□□ -1.62
VPS72-205ENST00000491094 TNP1P09430 55 aa4.92□□□□□ -1.62
VPS72-205ENST00000491094 KRTAP19-2Q3LHN2 52 aa4.89□□□□□ -1.63
VPS72-205ENST00000491094 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
VPS72-205ENST00000491094 HERC1Q15751 4861 aa4.89□□□□□ -1.63
VPS72-205ENST00000491094 PCLOQ9Y6V0 5065 aa4.82□□□□□ -1.64
VPS72-205ENST00000491094 RNF213Q63HN8 5207 aa4.81□□□□□ -1.64
VPS72-205ENST00000491094 FLGP20930 4061 aaPredicted RBP4.78□□□□□ -1.64
VPS72-205ENST00000491094 KRTAP10-10P60014 251 aa4.73□□□□□ -1.65
VPS72-205ENST00000491094 BIRC6Q9NR09 4857 aa4.7□□□□□ -1.66
VPS72-205ENST00000491094 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
VPS72-205ENST00000491094 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
VPS72-205ENST00000491094 UBR4Q5T4S7 5183 aa4.64□□□□□ -1.67
VPS72-205ENST00000491094 LCE2CQ5TA81 110 aa4.63□□□□□ -1.67
VPS72-205ENST00000491094 HMCN2Q8NDA2 5059 aa4.62□□□□□ -1.67
VPS72-205ENST00000491094 SPRR2GQ9BYE4 73 aa4.58□□□□□ -1.68
VPS72-205ENST00000491094 MT1FP04733 61 aa4.57□□□□□ -1.68
VPS72-205ENST00000491094 MT1HP80294 61 aa4.56□□□□□ -1.68
VPS72-205ENST00000491094 MT2AP02795 61 aa4.54□□□□□ -1.68
VPS72-205ENST00000491094 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
VPS72-205ENST00000491094 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
VPS72-205ENST00000491094 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
VPS72-205ENST00000491094 KRTAP12-3P60328 96 aa4.4□□□□□ -1.7
VPS72-205ENST00000491094 KRTAP10-12P60413 245 aa4.4□□□□□ -1.71
VPS72-205ENST00000491094 MT1BP07438 61 aa4.38□□□□□ -1.71
VPS72-205ENST00000491094 KRTAP10-5P60370 271 aa4.38□□□□□ -1.71
VPS72-205ENST00000491094 MT1XP80297 61 aa4.38□□□□□ -1.71
VPS72-205ENST00000491094 USH2AO75445 5202 aa4.37□□□□□ -1.71
VPS72-205ENST00000491094 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
VPS72-205ENST00000491094 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
VPS72-205ENST00000491094 KMT2DO14686 5537 aa4.33□□□□□ -1.72
VPS72-205ENST00000491094 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
VPS72-205ENST00000491094 PRO2289Q9P1D8 64 aa4.24□□□□□ -1.73
VPS72-205ENST00000491094 KRTAP9-3Q9BYQ3 159 aa4.23□□□□□ -1.73
VPS72-205ENST00000491094 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
VPS72-205ENST00000491094 KRTAP4-8A0A0G2JLE6 195 aa4.18□□□□□ -1.74
VPS72-205ENST00000491094 KRTAP4-8Q9BYQ9 185 aa4.18□□□□□ -1.74
VPS72-205ENST00000491094 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
VPS72-205ENST00000491094 LCE2BO14633 110 aa4.13□□□□□ -1.75
VPS72-205ENST00000491094 INE1O15225 51 aa4.09□□□□□ -1.75
VPS72-205ENST00000491094 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
VPS72-205ENST00000491094 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
VPS72-205ENST00000491094 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
VPS72-205ENST00000491094 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
VPS72-205ENST00000491094 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
VPS72-205ENST00000491094 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
VPS72-205ENST00000491094 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
VPS72-205ENST00000491094 LCE2AQ5TA79 106 aaPredicted RBP3.83□□□□□ -1.8
VPS72-205ENST00000491094 FCGBPQ9Y6R7 5405 aaPredicted RBP3.82□□□□□ -1.8
VPS72-205ENST00000491094 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
VPS72-205ENST00000491094 MT1LQ93083 61 aa3.79□□□□□ -1.8
VPS72-205ENST00000491094 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms