RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 MIR22HGQ0VDD5 57 aa6.77□□□□□ -1.33
FXR1-220ENST00000491062 SACSQ9NZJ4 4579 aa6.76□□□□□ -1.33
FXR1-220ENST00000491062 LINC00304Q8N9R0 145 aa6.76□□□□□ -1.33
FXR1-220ENST00000491062 VPS13BQ7Z7G8 4022 aa6.75□□□□□ -1.33
FXR1-220ENST00000491062 A0A0A0MQY5 61 aa6.74□□□□□ -1.33
FXR1-220ENST00000491062 HYDINQ4G0P3 5121 aa6.72□□□□□ -1.33
FXR1-220ENST00000491062 DNHD1Q96M86 4753 aa6.7□□□□□ -1.34
FXR1-220ENST00000491062 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
FXR1-220ENST00000491062 A8MUU9 505 aa6.68□□□□□ -1.34
FXR1-220ENST00000491062 PRAC1Q96KF2 57 aa6.65□□□□□ -1.34
FXR1-220ENST00000491062 PKHD1L1Q86WI1 4243 aa6.64□□□□□ -1.35
FXR1-220ENST00000491062 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
FXR1-220ENST00000491062 KRTAP10-4P60372 401 aaPredicted RBP6.59□□□□□ -1.35
FXR1-220ENST00000491062 C9orf92A6NGG3 77 aa6.58□□□□□ -1.36
FXR1-220ENST00000491062 H0YAA0 97 aa6.55□□□□□ -1.36
FXR1-220ENST00000491062 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
FXR1-220ENST00000491062 SMR3BP02814 79 aaPredicted RBP6.54□□□□□ -1.36
FXR1-220ENST00000491062 APOBP04114 4563 aaKnown RBP6.54□□□□□ -1.36
FXR1-220ENST00000491062 PKHD1P08F94 4074 aa6.53□□□□□ -1.36
FXR1-220ENST00000491062 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.36
FXR1-220ENST00000491062 LINC01554Q52M75 96 aa6.51□□□□□ -1.37
FXR1-220ENST00000491062 KRTAP21-3Q3LHN1 58 aa6.5□□□□□ -1.37
FXR1-220ENST00000491062 H1FX-AS1Q4G0G2 97 aa6.5□□□□□ -1.37
FXR1-220ENST00000491062 A0A1B0GU33 70 aa6.49□□□□□ -1.37
FXR1-220ENST00000491062 COX6B2Q6YFQ2 88 aa6.49□□□□□ -1.37
FXR1-220ENST00000491062 CSAG1Q6PB30 78 aa6.47□□□□□ -1.37
FXR1-220ENST00000491062 FAT1Q14517 4588 aa6.39□□□□□ -1.39
FXR1-220ENST00000491062 FLG2Q5D862 2391 aaPredicted RBP6.37□□□□□ -1.39
FXR1-220ENST00000491062 KRTAP10-8P60410 259 aa6.33□□□□□ -1.4
FXR1-220ENST00000491062 RPL37P61927 97 aaKnown RBP6.33□□□□□ -1.4
FXR1-220ENST00000491062 KRTAP25-1Q3LHN0 102 aa6.33□□□□□ -1.4
FXR1-220ENST00000491062 TNXBP22105 4242 aa6.33□□□□□ -1.4
FXR1-220ENST00000491062 K7ERS5 55 aa6.31□□□□□ -1.4
FXR1-220ENST00000491062 FAT3Q8TDW7 4589 aa6.31□□□□□ -1.4
FXR1-220ENST00000491062 KRTAP10-6P60371 365 aaPredicted RBP6.29□□□□□ -1.4
FXR1-220ENST00000491062 RYR2Q92736 4967 aa6.29□□□□□ -1.4
FXR1-220ENST00000491062 S4R3F8 94 aa6.24□□□□□ -1.41
FXR1-220ENST00000491062 HSPG2P98160 4391 aa6.24□□□□□ -1.41
FXR1-220ENST00000491062 Q5VSD8 79 aa6.22□□□□□ -1.41
FXR1-220ENST00000491062 KRTAP13-4Q3LI77 160 aa6.21□□□□□ -1.41
FXR1-220ENST00000491062 LRP1Q07954 4544 aaKnown RBP6.21□□□□□ -1.42
FXR1-220ENST00000491062 ROMO1P60602 79 aa6.2□□□□□ -1.42
FXR1-220ENST00000491062 SEC61BP60468 96 aaKnown RBP6.14□□□□□ -1.43
FXR1-220ENST00000491062 A0A0D9SG42 100 aa6.11□□□□□ -1.43
FXR1-220ENST00000491062 P0C880 135 aa6.11□□□□□ -1.43
FXR1-220ENST00000491062 LCE1AQ5T7P2 110 aa6.11□□□□□ -1.43
FXR1-220ENST00000491062 MT1HL1P0DM35 61 aa6.1□□□□□ -1.43
FXR1-220ENST00000491062 CRIPTQ9P021 101 aa6.09□□□□□ -1.43
FXR1-220ENST00000491062 RYR1P21817 5038 aa6.06□□□□□ -1.44
FXR1-220ENST00000491062 KRTAP17-1Q9BYP8 105 aa6.06□□□□□ -1.44
FXR1-220ENST00000491062 DMBT1Q9UGM3 2413 aaPredicted RBP6.05□□□□□ -1.44
FXR1-220ENST00000491062 KMT2CQ8NEZ4 4911 aaKnown RBP6.05□□□□□ -1.44
FXR1-220ENST00000491062 TPRXLQ17RH7 258 aa6.03□□□□□ -1.44
FXR1-220ENST00000491062 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
FXR1-220ENST00000491062 KRTAP12-1P59990 96 aa6□□□□□ -1.45
FXR1-220ENST00000491062 M0QZ58 72 aa5.98□□□□□ -1.45
FXR1-220ENST00000491062 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
FXR1-220ENST00000491062 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
FXR1-220ENST00000491062 KRTAP9-8Q9BYQ0 159 aa5.94□□□□□ -1.46
FXR1-220ENST00000491062 C10orf95Q9H7T3 257 aa5.92□□□□□ -1.46
FXR1-220ENST00000491062 SPINT4Q6UDR6 99 aa5.9□□□□□ -1.46
FXR1-220ENST00000491062 RYR3Q15413 4870 aa5.86□□□□□ -1.47
FXR1-220ENST00000491062 KIAA1109Q2LD37 5005 aa5.84□□□□□ -1.47
FXR1-220ENST00000491062 LPAP08519 4548 aa5.84□□□□□ -1.48
FXR1-220ENST00000491062 LRP2P98164 4655 aa5.82□□□□□ -1.48
FXR1-220ENST00000491062 R4GN34 69 aa5.75□□□□□ -1.49
FXR1-220ENST00000491062 MUC17Q685J3 4493 aa5.7□□□□□ -1.5
FXR1-220ENST00000491062 KRTAP4-1Q9BYQ7 146 aa5.67□□□□□ -1.5
FXR1-220ENST00000491062 KRTAP2-2Q9BYT5 123 aa5.66□□□□□ -1.5
FXR1-220ENST00000491062 ABCA13Q86UQ4 5058 aa5.65□□□□□ -1.51
FXR1-220ENST00000491062 KRTAP19-2Q3LHN2 52 aa5.64□□□□□ -1.51
FXR1-220ENST00000491062 EPPK1P58107 5090 aaKnown RBP5.64□□□□□ -1.51
FXR1-220ENST00000491062 NDUFAF8A1L188 74 aa5.61□□□□□ -1.51
FXR1-220ENST00000491062 MT3P25713 68 aa5.54□□□□□ -1.52
FXR1-220ENST00000491062 PP632Q6XCG6 107 aa5.51□□□□□ -1.53
FXR1-220ENST00000491062 PLAC4Q8WY50 150 aa5.48□□□□□ -1.53
FXR1-220ENST00000491062 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.54
FXR1-220ENST00000491062 HERC1Q15751 4861 aa5.4□□□□□ -1.54
FXR1-220ENST00000491062 FLGP20930 4061 aaPredicted RBP5.39□□□□□ -1.55
FXR1-220ENST00000491062 BIRC6Q9NR09 4857 aa5.37□□□□□ -1.55
FXR1-220ENST00000491062 HERC2O95714 4834 aa5.36□□□□□ -1.55
FXR1-220ENST00000491062 TNP1P09430 55 aa5.31□□□□□ -1.56
FXR1-220ENST00000491062 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
FXR1-220ENST00000491062 SPRR2GQ9BYE4 73 aa5.23□□□□□ -1.57
FXR1-220ENST00000491062 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
FXR1-220ENST00000491062 LCE1FQ5T754 118 aa5.19□□□□□ -1.58
FXR1-220ENST00000491062 HMCN2Q8NDA2 5059 aa5.14□□□□□ -1.59
FXR1-220ENST00000491062 PCLOQ9Y6V0 5065 aa5.13□□□□□ -1.59
FXR1-220ENST00000491062 MUC2Q02817 5179 aa5.13□□□□□ -1.59
FXR1-220ENST00000491062 KRTAP10-7P60409 375 aaPredicted RBP5.08□□□□□ -1.6
FXR1-220ENST00000491062 MT1HP80294 61 aa5.08□□□□□ -1.6
FXR1-220ENST00000491062 M0R2T5 61 aa5.04□□□□□ -1.6
FXR1-220ENST00000491062 MT2AP02795 61 aa5.04□□□□□ -1.6
FXR1-220ENST00000491062 MT1FP04733 61 aa5.03□□□□□ -1.6
FXR1-220ENST00000491062 LCE3AQ5TA76 89 aa5.01□□□□□ -1.61
FXR1-220ENST00000491062 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
FXR1-220ENST00000491062 KRTAP19-8Q3LI54 63 aa5.01□□□□□ -1.61
FXR1-220ENST00000491062 KRTAP10-10P60014 251 aa4.98□□□□□ -1.61
FXR1-220ENST00000491062 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
FXR1-220ENST00000491062 FAT4Q6V0I7 4981 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms