RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 DEFB116Q30KQ4 102 aa2.05□□□□□ -2.08
CRNKL1-203ENST00000490258 KRTAP13-1Q8IUC0 172 aa2.05□□□□□ -2.08
CRNKL1-203ENST00000490258 HERC1Q15751 4861 aa2.05□□□□□ -2.08
CRNKL1-203ENST00000490258 TENM2Q9NT68 2774 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 NUPR2A6NF83 97 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 PRLHP81277 87 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 Q6ZRN7 208 aaPredicted RBP2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 ABCA13Q86UQ4 5058 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 STAB2Q8WWQ8 2551 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 C8orf17Q9NRJ1 99 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 FAT2Q9NYQ8 4349 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 PKD1P98161 4303 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 DNAH8Q96JB1 4490 aa2.03□□□□□ -2.08
CRNKL1-203ENST00000490258 A0A096LNI7 61 aa2.03□□□□□ -2.08
CRNKL1-203ENST00000490258 RTL8CO15255 209 aa2.03□□□□□ -2.08
CRNKL1-203ENST00000490258 LINC00483Q53H64 154 aa2.03□□□□□ -2.08
CRNKL1-203ENST00000490258 KRTAP11-1Q8IUC1 163 aa2.03□□□□□ -2.08
CRNKL1-203ENST00000490258 HECTD4Q9Y4D8 3996 aa2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 NBDYA0A0U1RRE5 68 aa2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 A0A1B0GVX0 72 aa2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 SPAG11AQ6PDA7 123 aa2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 DMAC1Q96GE9 116 aa2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 DYNC1H1Q14204 4646 aaKnown RBP2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 LINC00313P59037 77 aa2.01□□□□□ -2.09
CRNKL1-203ENST00000490258 PCOTHQ58A44 107 aa2.01□□□□□ -2.09
CRNKL1-203ENST00000490258 SPATA8Q6RVD6 105 aa2.01□□□□□ -2.09
CRNKL1-203ENST00000490258 CAMK2N1Q7Z7J9 78 aa2.01□□□□□ -2.09
CRNKL1-203ENST00000490258 MRPL34Q9BQ48 92 aaKnown RBP2.01□□□□□ -2.09
CRNKL1-203ENST00000490258 PKHD1L1Q86WI1 4243 aa2.01□□□□□ -2.09
CRNKL1-203ENST00000490258 LINC01554Q52M75 96 aa2□□□□□ -2.09
CRNKL1-203ENST00000490258 ZNF706Q9Y5V0 76 aaPredicted RBP2□□□□□ -2.09
CRNKL1-203ENST00000490258 A0A087WTM6 91 aa1.99□□□□□ -2.09
CRNKL1-203ENST00000490258 APOBP04114 4563 aaKnown RBP1.99□□□□□ -2.09
CRNKL1-203ENST00000490258 SMR3BP02814 79 aaPredicted RBP1.98□□□□□ -2.09
CRNKL1-203ENST00000490258 ACYP2P14621 99 aa1.98□□□□□ -2.09
CRNKL1-203ENST00000490258 Q5W150 140 aa1.98□□□□□ -2.09
CRNKL1-203ENST00000490258 PKHD1P08F94 4074 aa1.98□□□□□ -2.09
CRNKL1-203ENST00000490258 C1orf134Q5TEV5 83 aa1.97□□□□□ -2.09
CRNKL1-203ENST00000490258 LRP1BQ9NZR2 4599 aa1.96□□□□□ -2.09
CRNKL1-203ENST00000490258 ADM2Q7Z4H4 148 aa1.96□□□□□ -2.1
CRNKL1-203ENST00000490258 SPACA4Q8TDM5 124 aa1.96□□□□□ -2.1
CRNKL1-203ENST00000490258 ANAPC11Q9NYG5 84 aa1.96□□□□□ -2.1
CRNKL1-203ENST00000490258 A0A1B0GU69 56 aa1.95□□□□□ -2.1
CRNKL1-203ENST00000490258 NDUFAF8A1L188 74 aa1.95□□□□□ -2.1
CRNKL1-203ENST00000490258 UQCR11O14957 56 aa1.95□□□□□ -2.1
CRNKL1-203ENST00000490258 IGLV7-43P04211 117 aa1.95□□□□□ -2.1
CRNKL1-203ENST00000490258 MIR22HGQ0VDD5 57 aa1.95□□□□□ -2.1
CRNKL1-203ENST00000490258 RETNLBQ9BQ08 111 aa1.95□□□□□ -2.1
CRNKL1-203ENST00000490258 HSPG2P98160 4391 aa1.94□□□□□ -2.1
CRNKL1-203ENST00000490258 ZNF861PO60384 105 aa1.93□□□□□ -2.1
CRNKL1-203ENST00000490258 FAT3Q8TDW7 4589 aa1.93□□□□□ -2.1
CRNKL1-203ENST00000490258 KRTAP12-2P59991 146 aa1.92□□□□□ -2.1
CRNKL1-203ENST00000490258 LUZP6Q538Z0 58 aa1.92□□□□□ -2.1
CRNKL1-203ENST00000490258 CSAG1Q6PB30 78 aa1.92□□□□□ -2.1
CRNKL1-203ENST00000490258 CIRBP-AS1Q8TBR5 109 aa1.92□□□□□ -2.1
CRNKL1-203ENST00000490258 MUC2Q02817 5179 aa1.91□□□□□ -2.1
CRNKL1-203ENST00000490258 SSBP3-AS1Q7Z2R9 100 aa1.91□□□□□ -2.1
CRNKL1-203ENST00000490258 PSORS1C2Q9UIG4 136 aa1.91□□□□□ -2.1
CRNKL1-203ENST00000490258 VPS13BQ7Z7G8 4022 aa1.9□□□□□ -2.11
CRNKL1-203ENST00000490258 A8MUU9 505 aa1.9□□□□□ -2.11
CRNKL1-203ENST00000490258 KRTAP1-4P0C5Y4 121 aa1.9□□□□□ -2.11
CRNKL1-203ENST00000490258 FAT1Q14517 4588 aa1.9□□□□□ -2.11
CRNKL1-203ENST00000490258 K7ERS5 55 aa1.89□□□□□ -2.11
CRNKL1-203ENST00000490258 KRTAP10-4P60372 401 aaPredicted RBP1.89□□□□□ -2.11
CRNKL1-203ENST00000490258 KRTAP25-1Q3LHN0 102 aa1.89□□□□□ -2.11
CRNKL1-203ENST00000490258 H0YAA0 97 aa1.88□□□□□ -2.11
CRNKL1-203ENST00000490258 ROMO1P60602 79 aa1.88□□□□□ -2.11
CRNKL1-203ENST00000490258 Q5VSD8 79 aa1.88□□□□□ -2.11
CRNKL1-203ENST00000490258 Q6ZSA8 131 aa1.88□□□□□ -2.11
CRNKL1-203ENST00000490258 TYMSOSQ8TAI1 123 aa1.88□□□□□ -2.11
CRNKL1-203ENST00000490258 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
CRNKL1-203ENST00000490258 SPINK6Q6UWN8 80 aa1.87□□□□□ -2.11
CRNKL1-203ENST00000490258 LRP1Q07954 4544 aaKnown RBP1.86□□□□□ -2.11
CRNKL1-203ENST00000490258 KRTAP13-2Q52LG2 175 aa1.86□□□□□ -2.11
CRNKL1-203ENST00000490258 LINC00304Q8N9R0 145 aa1.86□□□□□ -2.11
CRNKL1-203ENST00000490258 HMCN2Q8NDA2 5059 aa1.86□□□□□ -2.11
CRNKL1-203ENST00000490258 MYCBP2O75592 4640 aa1.86□□□□□ -2.11
CRNKL1-203ENST00000490258 FAT4Q6V0I7 4981 aa1.84□□□□□ -2.11
CRNKL1-203ENST00000490258 H1FX-AS1Q4G0G2 97 aa1.84□□□□□ -2.11
CRNKL1-203ENST00000490258 TNXBP22105 4242 aa1.84□□□□□ -2.12
CRNKL1-203ENST00000490258 FLG2Q5D862 2391 aaPredicted RBP1.83□□□□□ -2.12
CRNKL1-203ENST00000490258 A0A1B0GU33 70 aa1.83□□□□□ -2.12
CRNKL1-203ENST00000490258 RPS29P62273 56 aaKnown RBP1.83□□□□□ -2.12
CRNKL1-203ENST00000490258 DMBT1Q9UGM3 2413 aaPredicted RBP1.83□□□□□ -2.12
CRNKL1-203ENST00000490258 RNF213Q63HN8 5207 aa1.83□□□□□ -2.12
CRNKL1-203ENST00000490258 SRRM2Q9UQ35 2752 aaKnown RBP1.81□□□□□ -2.12
CRNKL1-203ENST00000490258 P0C880 135 aa1.81□□□□□ -2.12
CRNKL1-203ENST00000490258 C20orf166-AS1Q96NR2 134 aa1.81□□□□□ -2.12
CRNKL1-203ENST00000490258 LPAP08519 4548 aa1.8□□□□□ -2.12
CRNKL1-203ENST00000490258 SPINK1P00995 79 aa1.8□□□□□ -2.12
CRNKL1-203ENST00000490258 MT1HL1P0DM35 61 aa1.8□□□□□ -2.12
CRNKL1-203ENST00000490258 C9orf92A6NGG3 77 aa1.79□□□□□ -2.12
CRNKL1-203ENST00000490258 COX6B2Q6YFQ2 88 aa1.79□□□□□ -2.12
CRNKL1-203ENST00000490258 FSIP2Q5CZC0 6907 aa1.78□□□□□ -2.12
CRNKL1-203ENST00000490258 TPRXLQ17RH7 258 aa1.77□□□□□ -2.13
CRNKL1-203ENST00000490258 RPL37P61927 97 aaKnown RBP1.76□□□□□ -2.13
CRNKL1-203ENST00000490258 CRCT1Q9UGL9 99 aa1.75□□□□□ -2.13
CRNKL1-203ENST00000490258 KRTAP13-4Q3LI77 160 aa1.74□□□□□ -2.13
CRNKL1-203ENST00000490258 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms