RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 DEFB116Q30KQ4 102 aa2.05□□□□□ -2.08
CRNKL1-203ENST00000490258 KRTAP13-1Q8IUC0 172 aa2.05□□□□□ -2.08
CRNKL1-203ENST00000490258 HERC1Q15751 4861 aa2.05□□□□□ -2.08
CRNKL1-203ENST00000490258 TENM2Q9NT68 2774 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 NUPR2A6NF83 97 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 PRLHP81277 87 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 Q6ZRN7 208 aaPredicted RBP2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 ABCA13Q86UQ4 5058 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 STAB2Q8WWQ8 2551 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 C8orf17Q9NRJ1 99 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 FAT2Q9NYQ8 4349 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 PKD1P98161 4303 aa2.04□□□□□ -2.08
CRNKL1-203ENST00000490258 DNAH8Q96JB1 4490 aa2.03□□□□□ -2.08
CRNKL1-203ENST00000490258 A0A096LNI7 61 aa2.03□□□□□ -2.08
CRNKL1-203ENST00000490258 RTL8CO15255 209 aa2.03□□□□□ -2.08
CRNKL1-203ENST00000490258 LINC00483Q53H64 154 aa2.03□□□□□ -2.08
CRNKL1-203ENST00000490258 KRTAP11-1Q8IUC1 163 aa2.03□□□□□ -2.08
CRNKL1-203ENST00000490258 HECTD4Q9Y4D8 3996 aa2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 NBDYA0A0U1RRE5 68 aa2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 A0A1B0GVX0 72 aa2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 SPAG11AQ6PDA7 123 aa2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 DMAC1Q96GE9 116 aa2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 DYNC1H1Q14204 4646 aaKnown RBP2.02□□□□□ -2.09
CRNKL1-203ENST00000490258 LINC00313P59037 77 aa2.01□□□□□ -2.09
CRNKL1-203ENST00000490258 PCOTHQ58A44 107 aa2.01□□□□□ -2.09
CRNKL1-203ENST00000490258 SPATA8Q6RVD6 105 aa2.01□□□□□ -2.09
CRNKL1-203ENST00000490258 CAMK2N1Q7Z7J9 78 aa2.01□□□□□ -2.09
CRNKL1-203ENST00000490258 MRPL34Q9BQ48 92 aaKnown RBP2.01□□□□□ -2.09
CRNKL1-203ENST00000490258 PKHD1L1Q86WI1 4243 aa2.01□□□□□ -2.09
CRNKL1-203ENST00000490258 LINC01554Q52M75 96 aa2□□□□□ -2.09
CRNKL1-203ENST00000490258 ZNF706Q9Y5V0 76 aaPredicted RBP2□□□□□ -2.09
CRNKL1-203ENST00000490258 A0A087WTM6 91 aa1.99□□□□□ -2.09
CRNKL1-203ENST00000490258 APOBP04114 4563 aaKnown RBP1.99□□□□□ -2.09
CRNKL1-203ENST00000490258 SMR3BP02814 79 aaPredicted RBP1.98□□□□□ -2.09
CRNKL1-203ENST00000490258 ACYP2P14621 99 aa1.98□□□□□ -2.09
CRNKL1-203ENST00000490258 Q5W150 140 aa1.98□□□□□ -2.09
CRNKL1-203ENST00000490258 PKHD1P08F94 4074 aa1.98□□□□□ -2.09
CRNKL1-203ENST00000490258 C1orf134Q5TEV5 83 aa1.97□□□□□ -2.09
CRNKL1-203ENST00000490258 LRP1BQ9NZR2 4599 aa1.96□□□□□ -2.09
CRNKL1-203ENST00000490258 ADM2Q7Z4H4 148 aa1.96□□□□□ -2.1
CRNKL1-203ENST00000490258 SPACA4Q8TDM5 124 aa1.96□□□□□ -2.1
CRNKL1-203ENST00000490258 ANAPC11Q9NYG5 84 aa1.96□□□□□ -2.1
CRNKL1-203ENST00000490258 A0A1B0GU69 56 aa1.95□□□□□ -2.1
CRNKL1-203ENST00000490258 NDUFAF8A1L188 74 aa1.95□□□□□ -2.1
CRNKL1-203ENST00000490258 UQCR11O14957 56 aa1.95□□□□□ -2.1
CRNKL1-203ENST00000490258 IGLV7-43P04211 117 aa1.95□□□□□ -2.1
CRNKL1-203ENST00000490258 MIR22HGQ0VDD5 57 aa1.95□□□□□ -2.1
CRNKL1-203ENST00000490258 RETNLBQ9BQ08 111 aa1.95□□□□□ -2.1
CRNKL1-203ENST00000490258 HSPG2P98160 4391 aa1.94□□□□□ -2.1
CRNKL1-203ENST00000490258 ZNF861PO60384 105 aa1.93□□□□□ -2.1
CRNKL1-203ENST00000490258 FAT3Q8TDW7 4589 aa1.93□□□□□ -2.1
CRNKL1-203ENST00000490258 KRTAP12-2P59991 146 aa1.92□□□□□ -2.1
CRNKL1-203ENST00000490258 LUZP6Q538Z0 58 aa1.92□□□□□ -2.1
CRNKL1-203ENST00000490258 CSAG1Q6PB30 78 aa1.92□□□□□ -2.1
CRNKL1-203ENST00000490258 CIRBP-AS1Q8TBR5 109 aa1.92□□□□□ -2.1
CRNKL1-203ENST00000490258 MUC2Q02817 5179 aa1.91□□□□□ -2.1
CRNKL1-203ENST00000490258 SSBP3-AS1Q7Z2R9 100 aa1.91□□□□□ -2.1
CRNKL1-203ENST00000490258 PSORS1C2Q9UIG4 136 aa1.91□□□□□ -2.1
CRNKL1-203ENST00000490258 VPS13BQ7Z7G8 4022 aa1.9□□□□□ -2.11
CRNKL1-203ENST00000490258 A8MUU9 505 aa1.9□□□□□ -2.11
CRNKL1-203ENST00000490258 KRTAP1-4P0C5Y4 121 aa1.9□□□□□ -2.11
CRNKL1-203ENST00000490258 FAT1Q14517 4588 aa1.9□□□□□ -2.11
CRNKL1-203ENST00000490258 K7ERS5 55 aa1.89□□□□□ -2.11
CRNKL1-203ENST00000490258 KRTAP10-4P60372 401 aaPredicted RBP1.89□□□□□ -2.11
CRNKL1-203ENST00000490258 KRTAP25-1Q3LHN0 102 aa1.89□□□□□ -2.11
CRNKL1-203ENST00000490258 H0YAA0 97 aa1.88□□□□□ -2.11
CRNKL1-203ENST00000490258 ROMO1P60602 79 aa1.88□□□□□ -2.11
CRNKL1-203ENST00000490258 Q5VSD8 79 aa1.88□□□□□ -2.11
CRNKL1-203ENST00000490258 Q6ZSA8 131 aa1.88□□□□□ -2.11
CRNKL1-203ENST00000490258 TYMSOSQ8TAI1 123 aa1.88□□□□□ -2.11
CRNKL1-203ENST00000490258 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
CRNKL1-203ENST00000490258 SPINK6Q6UWN8 80 aa1.87□□□□□ -2.11
CRNKL1-203ENST00000490258 LRP1Q07954 4544 aaKnown RBP1.86□□□□□ -2.11
CRNKL1-203ENST00000490258 KRTAP13-2Q52LG2 175 aa1.86□□□□□ -2.11
CRNKL1-203ENST00000490258 LINC00304Q8N9R0 145 aa1.86□□□□□ -2.11
CRNKL1-203ENST00000490258 HMCN2Q8NDA2 5059 aa1.86□□□□□ -2.11
CRNKL1-203ENST00000490258 MYCBP2O75592 4640 aa1.86□□□□□ -2.11
CRNKL1-203ENST00000490258 FAT4Q6V0I7 4981 aa1.84□□□□□ -2.11
CRNKL1-203ENST00000490258 H1FX-AS1Q4G0G2 97 aa1.84□□□□□ -2.11
CRNKL1-203ENST00000490258 TNXBP22105 4242 aa1.84□□□□□ -2.12
CRNKL1-203ENST00000490258 FLG2Q5D862 2391 aaPredicted RBP1.83□□□□□ -2.12
CRNKL1-203ENST00000490258 A0A1B0GU33 70 aa1.83□□□□□ -2.12
CRNKL1-203ENST00000490258 RPS29P62273 56 aaKnown RBP1.83□□□□□ -2.12
CRNKL1-203ENST00000490258 DMBT1Q9UGM3 2413 aaPredicted RBP1.83□□□□□ -2.12
CRNKL1-203ENST00000490258 RNF213Q63HN8 5207 aa1.83□□□□□ -2.12
CRNKL1-203ENST00000490258 SRRM2Q9UQ35 2752 aaKnown RBP1.81□□□□□ -2.12
CRNKL1-203ENST00000490258 P0C880 135 aa1.81□□□□□ -2.12
CRNKL1-203ENST00000490258 C20orf166-AS1Q96NR2 134 aa1.81□□□□□ -2.12
CRNKL1-203ENST00000490258 LPAP08519 4548 aa1.8□□□□□ -2.12
CRNKL1-203ENST00000490258 SPINK1P00995 79 aa1.8□□□□□ -2.12
CRNKL1-203ENST00000490258 MT1HL1P0DM35 61 aa1.8□□□□□ -2.12
CRNKL1-203ENST00000490258 C9orf92A6NGG3 77 aa1.79□□□□□ -2.12
CRNKL1-203ENST00000490258 COX6B2Q6YFQ2 88 aa1.79□□□□□ -2.12
CRNKL1-203ENST00000490258 FSIP2Q5CZC0 6907 aa1.78□□□□□ -2.12
CRNKL1-203ENST00000490258 TPRXLQ17RH7 258 aa1.77□□□□□ -2.13
CRNKL1-203ENST00000490258 RPL37P61927 97 aaKnown RBP1.76□□□□□ -2.13
CRNKL1-203ENST00000490258 CRCT1Q9UGL9 99 aa1.75□□□□□ -2.13
CRNKL1-203ENST00000490258 KRTAP13-4Q3LI77 160 aa1.74□□□□□ -2.13
CRNKL1-203ENST00000490258 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms