RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 DNAH6Q9C0G6 4158 aa-0.24□□□□□ -2.45
NF1-213ENST00000489712 A0A0C4DFX4 3053 aa-0.24□□□□□ -2.45
NF1-213ENST00000489712 NBPF19A0A087WUL8 3843 aa-0.24□□□□□ -2.45
NF1-213ENST00000489712 RANBP2P49792 3224 aaKnown RBP-0.24□□□□□ -2.45
NF1-213ENST00000489712 DEFB1P60022 68 aa-0.24□□□□□ -2.45
NF1-213ENST00000489712 CCDC168Q8NDH2 2452 aa-0.24□□□□□ -2.45
NF1-213ENST00000489712 DNAH3Q8TD57 4116 aa-0.24□□□□□ -2.45
NF1-213ENST00000489712 SMIM2Q9BVW6 85 aa-0.25□□□□□ -2.45
NF1-213ENST00000489712 FANCD2Q9BXW9 1451 aa-0.25□□□□□ -2.45
NF1-213ENST00000489712 USH2AO75445 5202 aa-0.25□□□□□ -2.45
NF1-213ENST00000489712 KIAA1109Q2LD37 5005 aa-0.25□□□□□ -2.45
NF1-213ENST00000489712 EPPK1P58107 5090 aaKnown RBP-0.25□□□□□ -2.45
NF1-213ENST00000489712 TFF3Q07654 80 aa-0.26□□□□□ -2.45
NF1-213ENST00000489712 APOBP04114 4563 aaKnown RBP-0.26□□□□□ -2.45
NF1-213ENST00000489712 DDX60Q8IY21 1712 aaKnown RBP-0.27□□□□□ -2.45
NF1-213ENST00000489712 NRXN3Q9Y4C0 1643 aa-0.27□□□□□ -2.45
NF1-213ENST00000489712 SPART-AS1P0CW21 52 aa-0.27□□□□□ -2.45
NF1-213ENST00000489712 RIF1Q5UIP0 2472 aaKnown RBP-0.27□□□□□ -2.45
NF1-213ENST00000489712 SNRPGP15A8MWD9 76 aa-0.28□□□□□ -2.45
NF1-213ENST00000489712 KRTAP8-1Q8IUC2 63 aa-0.28□□□□□ -2.45
NF1-213ENST00000489712 VPS13DQ5THJ4 4388 aa-0.29□□□□□ -2.46
NF1-213ENST00000489712 ITPR3Q14573 2671 aa-0.29□□□□□ -2.46
NF1-213ENST00000489712 DOPEY1Q5JWR5 2465 aa-0.29□□□□□ -2.46
NF1-213ENST00000489712 MT1HP80294 61 aa-0.29□□□□□ -2.46
NF1-213ENST00000489712 KRTAP19-5Q3LI72 72 aa-0.29□□□□□ -2.46
NF1-213ENST00000489712 DNAH11Q96DT5 4516 aa-0.29□□□□□ -2.46
NF1-213ENST00000489712 RNF213Q63HN8 5207 aa-0.29□□□□□ -2.46
NF1-213ENST00000489712 STARD9Q9P2P6 4700 aa-0.29□□□□□ -2.46
NF1-213ENST00000489712 SPENQ96T58 3664 aaKnown RBP-0.3□□□□□ -2.46
NF1-213ENST00000489712 COL12A1Q99715 3063 aa-0.3□□□□□ -2.46
NF1-213ENST00000489712 LINC01546A6NGU7 62 aa-0.3□□□□□ -2.46
NF1-213ENST00000489712 COL6A5A8TX70 2615 aa-0.3□□□□□ -2.46
NF1-213ENST00000489712 DNAH2Q9P225 4427 aa-0.3□□□□□ -2.46
NF1-213ENST00000489712 IQGAP1P46940 1657 aa-0.3□□□□□ -2.46
NF1-213ENST00000489712 TLN2Q9Y4G6 2542 aa-0.31□□□□□ -2.46
NF1-213ENST00000489712 MT4P47944 62 aa-0.31□□□□□ -2.46
NF1-213ENST00000489712 KRTAP20-2Q3LI61 65 aa-0.31□□□□□ -2.46
NF1-213ENST00000489712 DNAH1Q9P2D7 4330 aa-0.32□□□□□ -2.46
NF1-213ENST00000489712 ITPR1Q14643 2758 aa-0.32□□□□□ -2.46
NF1-213ENST00000489712 SMR3BP02814 79 aaPredicted RBP-0.32□□□□□ -2.46
NF1-213ENST00000489712 CELSR3Q9NYQ7 3312 aa-0.32□□□□□ -2.46
NF1-213ENST00000489712 TRPM2O94759 1503 aa-0.33□□□□□ -2.46
NF1-213ENST00000489712 CLTCL1P53675 1640 aa-0.33□□□□□ -2.46
NF1-213ENST00000489712 POLR2KP53803 58 aaKnown RBP-0.33□□□□□ -2.46
NF1-213ENST00000489712 USP9YO00507 2555 aaPredicted RBP-0.33□□□□□ -2.46
NF1-213ENST00000489712 FRYQ5TBA9 3013 aa-0.33□□□□□ -2.46
NF1-213ENST00000489712 RYR2Q92736 4967 aa-0.33□□□□□ -2.46
NF1-213ENST00000489712 MUC17Q685J3 4493 aa-0.33□□□□□ -2.46
NF1-213ENST00000489712 BIRC6Q9NR09 4857 aa-0.34□□□□□ -2.46
NF1-213ENST00000489712 USP9XQ93008 2570 aaPredicted RBP-0.34□□□□□ -2.46
NF1-213ENST00000489712 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.35□□□□□ -2.47
NF1-213ENST00000489712 RELNP78509 3460 aa-0.35□□□□□ -2.47
NF1-213ENST00000489712 NDUFA1O15239 70 aa-0.36□□□□□ -2.47
NF1-213ENST00000489712 DNHD1Q96M86 4753 aa-0.37□□□□□ -2.47
NF1-213ENST00000489712 DNAH8Q96JB1 4490 aa-0.37□□□□□ -2.47
NF1-213ENST00000489712 SPTBN5Q9NRC6 3674 aaKnown RBP-0.37□□□□□ -2.47
NF1-213ENST00000489712 ABCA13Q86UQ4 5058 aa-0.37□□□□□ -2.47
NF1-213ENST00000489712 NFAT5O94916 1531 aa-0.38□□□□□ -2.47
NF1-213ENST00000489712 C5orf42Q9H799 3197 aa-0.39□□□□□ -2.47
NF1-213ENST00000489712 CHD7Q9P2D1 2997 aa-0.39□□□□□ -2.47
NF1-213ENST00000489712 TOMM5Q8N4H5 51 aa-0.4□□□□□ -2.47
NF1-213ENST00000489712 IQGAP2Q13576 1575 aa-0.4□□□□□ -2.47
NF1-213ENST00000489712 MT1EP04732 61 aa-0.41□□□□□ -2.48
NF1-213ENST00000489712 PLECQ15149 4684 aaKnown RBP-0.41□□□□□ -2.48
NF1-213ENST00000489712 ADGRG4Q8IZF6 3080 aa-0.41□□□□□ -2.48
NF1-213ENST00000489712 TEX15Q9BXT5 2789 aa-0.42□□□□□ -2.48
NF1-213ENST00000489712 SRCAPQ6ZRS2 3230 aa-0.43□□□□□ -2.48
NF1-213ENST00000489712 SPTAN1Q13813 2472 aaKnown RBP-0.43□□□□□ -2.48
NF1-213ENST00000489712 MT1XP80297 61 aa-0.43□□□□□ -2.48
NF1-213ENST00000489712 MGAQ8IWI9 3026 aa-0.43□□□□□ -2.48
NF1-213ENST00000489712 LEAP2Q969E1 77 aa-0.44□□□□□ -2.48
NF1-213ENST00000489712 LRBAP50851 2863 aa-0.44□□□□□ -2.48
NF1-213ENST00000489712 MT1LQ93083 61 aa-0.45□□□□□ -2.48
NF1-213ENST00000489712 DNAH7Q8WXX0 4024 aa-0.46□□□□□ -2.48
NF1-213ENST00000489712 LAMA3Q16787 3333 aa-0.46□□□□□ -2.48
NF1-213ENST00000489712 NIPBLQ6KC79 2804 aaeCLIP-0.46□□□□□ -2.48
NF1-213ENST00000489712 CSMD1Q96PZ7 3565 aa-0.47□□□□□ -2.49
NF1-213ENST00000489712 CMYA5Q8N3K9 4069 aa-0.48□□□□□ -2.49
NF1-213ENST00000489712 LAMA2P24043 3122 aaKnown RBP-0.48□□□□□ -2.49
NF1-213ENST00000489712 MYO9AB2RTY4 2548 aa-0.49□□□□□ -2.49
NF1-213ENST00000489712 DNAH10Q8IVF4 4471 aa-0.5□□□□□ -2.49
NF1-213ENST00000489712 DEFB136Q30KP8 78 aa-0.5□□□□□ -2.49
NF1-213ENST00000489712 ZFHX4Q86UP3 3567 aa-0.5□□□□□ -2.49
NF1-213ENST00000489712 CFAP46Q8IYW2 2715 aa-0.51□□□□□ -2.49
NF1-213ENST00000489712 TOMM7Q9P0U1 55 aa-0.51□□□□□ -2.49
NF1-213ENST00000489712 DNAH17Q9UFH2 4485 aa-0.52□□□□□ -2.49
NF1-213ENST00000489712 CRYBG3Q68DQ2 2970 aa-0.52□□□□□ -2.49
NF1-213ENST00000489712 DYNC1H1Q14204 4646 aaKnown RBP-0.52□□□□□ -2.49
NF1-213ENST00000489712 ATP7AQ04656 1500 aa-0.53□□□□□ -2.49
NF1-213ENST00000489712 MT1HL1P0DM35 61 aa-0.53□□□□□ -2.49
NF1-213ENST00000489712 SAMD9LQ8IVG5 1584 aa-0.54□□□□□ -2.5
NF1-213ENST00000489712 DEFB4AO15263 64 aa-0.55□□□□□ -2.5
NF1-213ENST00000489712 EYSQ5T1H1 3165 aa-0.55□□□□□ -2.5
NF1-213ENST00000489712 LINC01590Q5TEZ4 76 aa-0.56□□□□□ -2.5
NF1-213ENST00000489712 DMXL2Q8TDJ6 3036 aa-0.56□□□□□ -2.5
NF1-213ENST00000489712 RPL39P62891 51 aaKnown RBP-0.58□□□□□ -2.5
NF1-213ENST00000489712 TRRAPQ9Y4A5 3859 aa-0.59□□□□□ -2.5
NF1-213ENST00000489712 MT1GP13640 62 aa-0.59□□□□□ -2.5
NF1-213ENST00000489712 CEP295Q9C0D2 2601 aa-0.6□□□□□ -2.51
NF1-213ENST00000489712 DNAH5Q8TE73 4624 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms