RNA–Protein interactions for RNA: ENST00000489491.1

PDZD8-204, Transcript of PDZ domain containing 8, humanhuman

TSL 2

Gene PDZD8, Length 289 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-204ENST00000489491 KRTAP6-2Q3LI66 62 aa0.24□□□□□ -2.37
PDZD8-204ENST00000489491 FASNP49327 2511 aaKnown RBP0.24□□□□□ -2.37
PDZD8-204ENST00000489491 RIF1Q5UIP0 2472 aaKnown RBP0.24□□□□□ -2.37
PDZD8-204ENST00000489491 LRP2P98164 4655 aa0.23□□□□□ -2.37
PDZD8-204ENST00000489491 CLPSL2Q6UWE3 100 aa0.23□□□□□ -2.37
PDZD8-204ENST00000489491 DUOX1Q9NRD9 1551 aa0.23□□□□□ -2.37
PDZD8-204ENST00000489491 VPS13DQ5THJ4 4388 aa0.22□□□□□ -2.37
PDZD8-204ENST00000489491 DNAH8Q96JB1 4490 aa0.22□□□□□ -2.37
PDZD8-204ENST00000489491 DNAH7Q8WXX0 4024 aa0.22□□□□□ -2.37
PDZD8-204ENST00000489491 KIAA1109Q2LD37 5005 aa0.22□□□□□ -2.37
PDZD8-204ENST00000489491 TNP1P09430 55 aa0.22□□□□□ -2.37
PDZD8-204ENST00000489491 SSPOA2VEC9 5147 aa0.22□□□□□ -2.37
PDZD8-204ENST00000489491 ACACAQ13085 2346 aa0.21□□□□□ -2.38
PDZD8-204ENST00000489491 HMCN2Q8NDA2 5059 aa0.21□□□□□ -2.38
PDZD8-204ENST00000489491 MT1AP04731 61 aa0.21□□□□□ -2.38
PDZD8-204ENST00000489491 NBEAL1Q6ZS30 2694 aa0.21□□□□□ -2.38
PDZD8-204ENST00000489491 KMT2CQ8NEZ4 4911 aaKnown RBP0.21□□□□□ -2.38
PDZD8-204ENST00000489491 DNAH1Q9P2D7 4330 aa0.21□□□□□ -2.38
PDZD8-204ENST00000489491 USP9YO00507 2555 aaPredicted RBP0.21□□□□□ -2.38
PDZD8-204ENST00000489491 MXRA5Q9NR99 2828 aa0.2□□□□□ -2.38
PDZD8-204ENST00000489491 MROH2BQ7Z745 1585 aa0.2□□□□□ -2.38
PDZD8-204ENST00000489491 POLR2KP53803 58 aaKnown RBP0.2□□□□□ -2.38
PDZD8-204ENST00000489491 ZFHX4Q86UP3 3567 aa0.2□□□□□ -2.38
PDZD8-204ENST00000489491 CELSR3Q9NYQ7 3312 aa0.2□□□□□ -2.38
PDZD8-204ENST00000489491 MYO18BQ8IUG5 2567 aa0.19□□□□□ -2.38
PDZD8-204ENST00000489491 ITPR1Q14643 2758 aa0.19□□□□□ -2.38
PDZD8-204ENST00000489491 STAB2Q8WWQ8 2551 aa0.19□□□□□ -2.38
PDZD8-204ENST00000489491 SPG11Q96JI7 2443 aa0.18□□□□□ -2.38
PDZD8-204ENST00000489491 RNF213Q63HN8 5207 aa0.18□□□□□ -2.38
PDZD8-204ENST00000489491 DEFB110Q30KQ9 67 aa0.18□□□□□ -2.38
PDZD8-204ENST00000489491 COL6A5A8TX70 2615 aa0.18□□□□□ -2.38
PDZD8-204ENST00000489491 ITPR3Q14573 2671 aa0.18□□□□□ -2.38
PDZD8-204ENST00000489491 SPRR2EP22531 72 aa0.17□□□□□ -2.38
PDZD8-204ENST00000489491 LAMA1P25391 3075 aa0.17□□□□□ -2.38
PDZD8-204ENST00000489491 RPL39P62891 51 aaKnown RBP0.17□□□□□ -2.38
PDZD8-204ENST00000489491 KRTAP20-1Q3LI63 56 aa0.17□□□□□ -2.38
PDZD8-204ENST00000489491 RYR1P21817 5038 aa0.17□□□□□ -2.38
PDZD8-204ENST00000489491 FAM186AA6NE01 2351 aa0.17□□□□□ -2.38
PDZD8-204ENST00000489491 ACACBO00763 2458 aa0.16□□□□□ -2.38
PDZD8-204ENST00000489491 FAT1Q14517 4588 aa0.16□□□□□ -2.38
PDZD8-204ENST00000489491 RELNP78509 3460 aa0.16□□□□□ -2.38
PDZD8-204ENST00000489491 CSMD1Q96PZ7 3565 aa0.15□□□□□ -2.38
PDZD8-204ENST00000489491 KRTAP8-1Q8IUC2 63 aa0.15□□□□□ -2.39
PDZD8-204ENST00000489491 SPRR2FQ96RM1 72 aa0.15□□□□□ -2.39
PDZD8-204ENST00000489491 RYR2Q92736 4967 aa0.14□□□□□ -2.39
PDZD8-204ENST00000489491 USP9XQ93008 2570 aaPredicted RBP0.14□□□□□ -2.39
PDZD8-204ENST00000489491 MGAM2Q2M2H8 2515 aa0.13□□□□□ -2.39
PDZD8-204ENST00000489491 MUC12Q9UKN1 5478 aa0.12□□□□□ -2.39
PDZD8-204ENST00000489491 KRTAP19-5Q3LI72 72 aa0.12□□□□□ -2.39
PDZD8-204ENST00000489491 RPL39LQ96EH5 51 aaKnown RBP0.12□□□□□ -2.39
PDZD8-204ENST00000489491 CCDC168Q8NDH2 2452 aa0.12□□□□□ -2.39
PDZD8-204ENST00000489491 TLN2Q9Y4G6 2542 aa0.12□□□□□ -2.39
PDZD8-204ENST00000489491 ADGRG4Q8IZF6 3080 aa0.12□□□□□ -2.39
PDZD8-204ENST00000489491 TRRAPQ9Y4A5 3859 aa0.12□□□□□ -2.39
PDZD8-204ENST00000489491 MGAQ8IWI9 3026 aa0.11□□□□□ -2.39
PDZD8-204ENST00000489491 DNAH10Q8IVF4 4471 aa0.11□□□□□ -2.39
PDZD8-204ENST00000489491 DMXL2Q8TDJ6 3036 aa0.1□□□□□ -2.39
PDZD8-204ENST00000489491 C5orf42Q9H799 3197 aa0.1□□□□□ -2.39
PDZD8-204ENST00000489491 GCC2Q8IWJ2 1684 aa0.1□□□□□ -2.39
PDZD8-204ENST00000489491 CFAP54Q96N23 3096 aa0.1□□□□□ -2.39
PDZD8-204ENST00000489491 SMG1Q96Q15 3661 aaKnown RBP0.09□□□□□ -2.39
PDZD8-204ENST00000489491 SMR3BP02814 79 aaPredicted RBP0.09□□□□□ -2.4
PDZD8-204ENST00000489491 CMYA5Q8N3K9 4069 aa0.09□□□□□ -2.4
PDZD8-204ENST00000489491 HYDINQ4G0P3 5121 aa0.07□□□□□ -2.4
PDZD8-204ENST00000489491 LAMA3Q16787 3333 aa0.07□□□□□ -2.4
PDZD8-204ENST00000489491 SPART-AS1P0CW21 52 aa0.07□□□□□ -2.4
PDZD8-204ENST00000489491 TOMM7Q9P0U1 55 aa0.07□□□□□ -2.4
PDZD8-204ENST00000489491 PLECQ15149 4684 aaKnown RBP0.07□□□□□ -2.4
PDZD8-204ENST00000489491 ABCA13Q86UQ4 5058 aa0.06□□□□□ -2.4
PDZD8-204ENST00000489491 LEAP2Q969E1 77 aa0.06□□□□□ -2.4
PDZD8-204ENST00000489491 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
PDZD8-204ENST00000489491 MUC17Q685J3 4493 aa0.04□□□□□ -2.4
PDZD8-204ENST00000489491 RYR3Q15413 4870 aa0.04□□□□□ -2.4
PDZD8-204ENST00000489491 DYNC1H1Q14204 4646 aaKnown RBP0.04□□□□□ -2.4
PDZD8-204ENST00000489491 STARD9Q9P2P6 4700 aa0.04□□□□□ -2.4
PDZD8-204ENST00000489491 HERC1Q15751 4861 aa0.03□□□□□ -2.4
PDZD8-204ENST00000489491 SPTAN1Q13813 2472 aaKnown RBP0.03□□□□□ -2.41
PDZD8-204ENST00000489491 ATMQ13315 3056 aa0.02□□□□□ -2.41
PDZD8-204ENST00000489491 TEX15Q9BXT5 2789 aa0.01□□□□□ -2.41
PDZD8-204ENST00000489491 VPS13CQ709C8 3753 aa0.01□□□□□ -2.41
PDZD8-204ENST00000489491 DNAH17Q9UFH2 4485 aa0.01□□□□□ -2.41
PDZD8-204ENST00000489491 ARHGAP5-AS1Q96IT6 56 aa0.01□□□□□ -2.41
PDZD8-204ENST00000489491 LRBAP50851 2863 aa0□□□□□ -2.41
PDZD8-204ENST00000489491 EPPK1P58107 5090 aaKnown RBP0□□□□□ -2.41
PDZD8-204ENST00000489491 NIPBLQ6KC79 2804 aaeCLIP0□□□□□ -2.41
PDZD8-204ENST00000489491 PRUNE2Q8WUY3 3088 aa0□□□□□ -2.41
PDZD8-204ENST00000489491 MYO9AB2RTY4 2548 aa-0.01□□□□□ -2.41
PDZD8-204ENST00000489491 DEFB1P60022 68 aa-0.01□□□□□ -2.41
PDZD8-204ENST00000489491 DOPEY1Q5JWR5 2465 aa-0.01□□□□□ -2.41
PDZD8-204ENST00000489491 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
PDZD8-204ENST00000489491 LINC01590Q5TEZ4 76 aa-0.02□□□□□ -2.41
PDZD8-204ENST00000489491 DMDP11532 3685 aa-0.02□□□□□ -2.41
PDZD8-204ENST00000489491 FRYLO94915 3013 aa-0.03□□□□□ -2.41
PDZD8-204ENST00000489491 USH2AO75445 5202 aa-0.03□□□□□ -2.41
PDZD8-204ENST00000489491 CFAP46Q8IYW2 2715 aa-0.03□□□□□ -2.41
PDZD8-204ENST00000489491 SRCAPQ6ZRS2 3230 aa-0.04□□□□□ -2.42
PDZD8-204ENST00000489491 MT1HP80294 61 aa-0.04□□□□□ -2.42
PDZD8-204ENST00000489491 KRTAP19-7Q3SYF9 63 aa-0.04□□□□□ -2.42
PDZD8-204ENST00000489491 MUC3AQ02505 3323 aa-0.04□□□□□ -2.42
PDZD8-204ENST00000489491 TLN1Q9Y490 2541 aaKnown RBP-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms