RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 MT1BP07438 61 aa11.23□□□□□ -0.61
HMGN1-217ENST00000489072 A0A1B0GV90 55 aa11.21□□□□□ -0.61
HMGN1-217ENST00000489072 ATOX1O00244 68 aa11.21□□□□□ -0.61
HMGN1-217ENST00000489072 KLKP1Q107X0 134 aa11.2□□□□□ -0.62
HMGN1-217ENST00000489072 KRTAP19-8Q3LI54 63 aa11.2□□□□□ -0.62
HMGN1-217ENST00000489072 Q5VV11 94 aa11.16□□□□□ -0.62
HMGN1-217ENST00000489072 LINC00208Q96KT6 92 aa11.08□□□□□ -0.64
HMGN1-217ENST00000489072 OCR1Q9BZK8 76 aa11.07□□□□□ -0.64
HMGN1-217ENST00000489072 A6NN06 94 aa11.05□□□□□ -0.64
HMGN1-217ENST00000489072 NDUFC1O43677 76 aa11.04□□□□□ -0.64
HMGN1-217ENST00000489072 IMUPQ9GZP8 106 aa11.03□□□□□ -0.64
HMGN1-217ENST00000489072 KRTAP6-3Q3LI67 103 aa11.02□□□□□ -0.65
HMGN1-217ENST00000489072 A8MUN3 132 aa11.01□□□□□ -0.65
HMGN1-217ENST00000489072 CRIPTQ9P021 101 aa11.01□□□□□ -0.65
HMGN1-217ENST00000489072 MP68P56378 58 aa10.98□□□□□ -0.65
HMGN1-217ENST00000489072 H0YAA0 97 aa10.97□□□□□ -0.65
HMGN1-217ENST00000489072 KRTAP10-5P60370 271 aa10.95□□□□□ -0.66
HMGN1-217ENST00000489072 J3QR89 54 aa10.9□□□□□ -0.66
HMGN1-217ENST00000489072 ADM2Q7Z4H4 148 aa10.86□□□□□ -0.67
HMGN1-217ENST00000489072 H3BPC8 53 aa10.82□□□□□ -0.68
HMGN1-217ENST00000489072 SCGB1A1P11684 91 aa10.77□□□□□ -0.69
HMGN1-217ENST00000489072 DMAC1Q96GE9 116 aa10.74□□□□□ -0.69
HMGN1-217ENST00000489072 P0C880 135 aa10.65□□□□□ -0.7
HMGN1-217ENST00000489072 MUC12Q9UKN1 5478 aa10.62□□□□□ -0.71
HMGN1-217ENST00000489072 NEBP20929 6669 aa10.61□□□□□ -0.71
HMGN1-217ENST00000489072 MT-ATP8P03928 68 aa10.61□□□□□ -0.71
HMGN1-217ENST00000489072 R4GN34 69 aa10.56□□□□□ -0.72
HMGN1-217ENST00000489072 C20orf197Q8N268 126 aa10.54□□□□□ -0.72
HMGN1-217ENST00000489072 KRTAP5-9P26371 169 aa10.53□□□□□ -0.72
HMGN1-217ENST00000489072 MT1XP80297 61 aa10.52□□□□□ -0.73
HMGN1-217ENST00000489072 TRAV7A0A075B6U4 112 aa10.5□□□□□ -0.73
HMGN1-217ENST00000489072 M0QZ58 72 aa10.5□□□□□ -0.73
HMGN1-217ENST00000489072 K7ERU9 68 aa10.49□□□□□ -0.73
HMGN1-217ENST00000489072 PLAC4Q8WY50 150 aa10.49□□□□□ -0.73
HMGN1-217ENST00000489072 PRO2289Q9P1D8 64 aa10.47□□□□□ -0.73
HMGN1-217ENST00000489072 KMT2DO14686 5537 aa10.46□□□□□ -0.73
HMGN1-217ENST00000489072 SMIM20Q8N5G0 67 aa10.46□□□□□ -0.73
HMGN1-217ENST00000489072 ACYP2P14621 99 aa10.43□□□□□ -0.74
HMGN1-217ENST00000489072 MDN1Q9NU22 5596 aa10.36□□□□□ -0.75
HMGN1-217ENST00000489072 LINC01554Q52M75 96 aa10.35□□□□□ -0.75
HMGN1-217ENST00000489072 SNURFQ9Y675 71 aa10.31□□□□□ -0.76
HMGN1-217ENST00000489072 SPTSSBQ8NFR3 76 aa10.29□□□□□ -0.76
HMGN1-217ENST00000489072 KRTAP12-2P59991 146 aa10.24□□□□□ -0.77
HMGN1-217ENST00000489072 CHKB-CPT1BH3BT56 60 aa10.23□□□□□ -0.77
HMGN1-217ENST00000489072 KRTAP20-1Q3LI63 56 aa10.2□□□□□ -0.78
HMGN1-217ENST00000489072 SPRR2FQ96RM1 72 aa10.2□□□□□ -0.78
HMGN1-217ENST00000489072 KRTAP8-1Q8IUC2 63 aa10.16□□□□□ -0.78
HMGN1-217ENST00000489072 SPANXA2-OT1Q8N9U9 137 aa10.15□□□□□ -0.78
HMGN1-217ENST00000489072 SERP2Q8N6R1 65 aa10.13□□□□□ -0.79
HMGN1-217ENST00000489072 KRTAP4-8A0A0G2JLE6 195 aa10.08□□□□□ -0.8
HMGN1-217ENST00000489072 KRTAP4-8Q9BYQ9 185 aa10.08□□□□□ -0.8
HMGN1-217ENST00000489072 SPRR2EP22531 72 aa10.06□□□□□ -0.8
HMGN1-217ENST00000489072 SPRR2BP35325 72 aa10.06□□□□□ -0.8
HMGN1-217ENST00000489072 SPRR2AP35326 72 aa10.06□□□□□ -0.8
HMGN1-217ENST00000489072 LOC100996750A0A140TA64 210 aa10.05□□□□□ -0.8
HMGN1-217ENST00000489072 KRTAP10-7P60409 375 aaPredicted RBP10.05□□□□□ -0.8
HMGN1-217ENST00000489072 KRTAP4-6Q9BYQ5 205 aa10.05□□□□□ -0.8
HMGN1-217ENST00000489072 KRTAP10-12P60413 245 aa9.98□□□□□ -0.81
HMGN1-217ENST00000489072 KRTAP13-4Q3LI77 160 aa9.96□□□□□ -0.82
HMGN1-217ENST00000489072 LCE1AQ5T7P2 110 aa9.95□□□□□ -0.82
HMGN1-217ENST00000489072 KRTAP2-3P0C7H8 128 aa9.93□□□□□ -0.82
HMGN1-217ENST00000489072 KRTAP2-4Q9BYR9 128 aa9.93□□□□□ -0.82
HMGN1-217ENST00000489072 COA5Q86WW8 74 aa9.89□□□□□ -0.83
HMGN1-217ENST00000489072 COX7CP15954 63 aa9.81□□□□□ -0.84
HMGN1-217ENST00000489072 CYSTM1Q9H1C7 97 aa9.73□□□□□ -0.85
HMGN1-217ENST00000489072 SPRR2DP22532 72 aa9.72□□□□□ -0.85
HMGN1-217ENST00000489072 CAMK2N1Q7Z7J9 78 aa9.7□□□□□ -0.86
HMGN1-217ENST00000489072 H7BZZ5 65 aa9.69□□□□□ -0.86
HMGN1-217ENST00000489072 SEC61GP60059 68 aa9.66□□□□□ -0.86
HMGN1-217ENST00000489072 SERP1Q9Y6X1 66 aa9.66□□□□□ -0.86
HMGN1-217ENST00000489072 A0A0D9SG42 100 aa9.61□□□□□ -0.87
HMGN1-217ENST00000489072 KRTAP2-2Q9BYT5 123 aa9.61□□□□□ -0.87
HMGN1-217ENST00000489072 KRTAP2-1Q9BYU5 128 aa9.61□□□□□ -0.87
HMGN1-217ENST00000489072 SPATA8Q6RVD6 105 aa9.6□□□□□ -0.87
HMGN1-217ENST00000489072 A0A1B0GU33 70 aa9.55□□□□□ -0.88
HMGN1-217ENST00000489072 LCE3BQ5TA77 95 aa9.46□□□□□ -0.9
HMGN1-217ENST00000489072 SPINT4Q6UDR6 99 aa9.46□□□□□ -0.9
HMGN1-217ENST00000489072 KRTAP12-1P59990 96 aa9.44□□□□□ -0.9
HMGN1-217ENST00000489072 ANAPC13Q9BS18 74 aa9.43□□□□□ -0.9
HMGN1-217ENST00000489072 KRTAP19-7Q3SYF9 63 aa9.41□□□□□ -0.9
HMGN1-217ENST00000489072 A0A1B0GU69 56 aa9.35□□□□□ -0.91
HMGN1-217ENST00000489072 MT1EP04732 61 aa9.32□□□□□ -0.92
HMGN1-217ENST00000489072 CCDC179H3BU77 68 aa9.3□□□□□ -0.92
HMGN1-217ENST00000489072 LCE5AQ5TCM9 118 aa9.26□□□□□ -0.93
HMGN1-217ENST00000489072 SMIM26A0A096LP01 95 aa9.25□□□□□ -0.93
HMGN1-217ENST00000489072 A8MU10 97 aa9.25□□□□□ -0.93
HMGN1-217ENST00000489072 KRTAP19-3Q7Z4W3 81 aa9.23□□□□□ -0.93
HMGN1-217ENST00000489072 KRTAP19-5Q3LI72 72 aa9.17□□□□□ -0.94
HMGN1-217ENST00000489072 ATP5EP56381 51 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-217ENST00000489072 DSTQ03001 7570 aaKnown RBP9.09□□□□□ -0.95
HMGN1-217ENST00000489072 PRR15LQ9BU68 103 aa9.04□□□□□ -0.96
HMGN1-217ENST00000489072 C10orf95Q9H7T3 257 aa9.04□□□□□ -0.96
HMGN1-217ENST00000489072 LINC01558Q9Y6Z2 57 aa9.01□□□□□ -0.97
HMGN1-217ENST00000489072 MT1GP13640 62 aa8.99□□□□□ -0.97
HMGN1-217ENST00000489072 KRTAP4-12Q9BQ66 201 aa8.98□□□□□ -0.97
HMGN1-217ENST00000489072 LCE3AQ5TA76 89 aa8.96□□□□□ -0.98
HMGN1-217ENST00000489072 TNP1P09430 55 aa8.94□□□□□ -0.98
HMGN1-217ENST00000489072 MT1LQ93083 61 aa8.91□□□□□ -0.98
HMGN1-217ENST00000489072 TMEM258P61165 79 aa8.89□□□□□ -0.99
HMGN1-217ENST00000489072 PP632Q6XCG6 107 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms