RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 KRTAP15-1Q3LI76 137 aa10.31□□□□□ -0.76
HMG20B-213ENST00000488973 COX6B2Q6YFQ2 88 aa10.31□□□□□ -0.76
HMG20B-213ENST00000488973 KRTAP10-4P60372 401 aaPredicted RBP10.29□□□□□ -0.76
HMG20B-213ENST00000488973 FAT1Q14517 4588 aa10.21□□□□□ -0.78
HMG20B-213ENST00000488973 FLG2Q5D862 2391 aaPredicted RBP10.19□□□□□ -0.78
HMG20B-213ENST00000488973 TPRXLQ17RH7 258 aa10.11□□□□□ -0.79
HMG20B-213ENST00000488973 KRTAP10-6P60371 365 aaPredicted RBP10.06□□□□□ -0.8
HMG20B-213ENST00000488973 RYR3Q15413 4870 aa10.06□□□□□ -0.8
HMG20B-213ENST00000488973 FAT3Q8TDW7 4589 aa10.06□□□□□ -0.8
HMG20B-213ENST00000488973 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
HMG20B-213ENST00000488973 RPL37P61927 97 aaKnown RBP10.04□□□□□ -0.8
HMG20B-213ENST00000488973 LUZP6Q538Z0 58 aa9.99□□□□□ -0.81
HMG20B-213ENST00000488973 Q5VSD8 79 aa9.99□□□□□ -0.81
HMG20B-213ENST00000488973 KRTAP13-4Q3LI77 160 aa9.97□□□□□ -0.81
HMG20B-213ENST00000488973 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
HMG20B-213ENST00000488973 HSPG2P98160 4391 aa9.96□□□□□ -0.82
HMG20B-213ENST00000488973 TNXBP22105 4242 aa9.94□□□□□ -0.82
HMG20B-213ENST00000488973 S4R3F8 94 aa9.92□□□□□ -0.82
HMG20B-213ENST00000488973 LRP1Q07954 4544 aaKnown RBP9.91□□□□□ -0.82
HMG20B-213ENST00000488973 DMBT1Q9UGM3 2413 aaPredicted RBP9.91□□□□□ -0.82
HMG20B-213ENST00000488973 KRTAP10-8P60410 259 aa9.91□□□□□ -0.82
HMG20B-213ENST00000488973 RYR1P21817 5038 aa9.9□□□□□ -0.82
HMG20B-213ENST00000488973 A0A0D9SG42 100 aa9.89□□□□□ -0.83
HMG20B-213ENST00000488973 KRTAP17-1Q9BYP8 105 aa9.85□□□□□ -0.83
HMG20B-213ENST00000488973 C10orf95Q9H7T3 257 aa9.85□□□□□ -0.83
HMG20B-213ENST00000488973 XP32Q5T750 250 aa9.85□□□□□ -0.83
HMG20B-213ENST00000488973 KIAA1109Q2LD37 5005 aa9.74□□□□□ -0.85
HMG20B-213ENST00000488973 MT1HL1P0DM35 61 aa9.68□□□□□ -0.86
HMG20B-213ENST00000488973 EPPK1P58107 5090 aaKnown RBP9.68□□□□□ -0.86
HMG20B-213ENST00000488973 KRTAP12-2P59991 146 aa9.67□□□□□ -0.86
HMG20B-213ENST00000488973 MYCBP2O75592 4640 aa9.66□□□□□ -0.86
HMG20B-213ENST00000488973 SEC61BP60468 96 aaKnown RBP9.63□□□□□ -0.87
HMG20B-213ENST00000488973 KRTAP12-1P59990 96 aa9.61□□□□□ -0.87
HMG20B-213ENST00000488973 M0QZ58 72 aa9.55□□□□□ -0.88
HMG20B-213ENST00000488973 KRTAP4-5Q9BYR2 181 aa9.5□□□□□ -0.89
HMG20B-213ENST00000488973 LPAP08519 4548 aa9.43□□□□□ -0.9
HMG20B-213ENST00000488973 LRP2P98164 4655 aa9.36□□□□□ -0.91
HMG20B-213ENST00000488973 PLAC4Q8WY50 150 aa9.32□□□□□ -0.92
HMG20B-213ENST00000488973 BIRC6Q9NR09 4857 aa9.25□□□□□ -0.93
HMG20B-213ENST00000488973 HERC2O95714 4834 aa9.22□□□□□ -0.93
HMG20B-213ENST00000488973 R4GN34 69 aa9.22□□□□□ -0.93
HMG20B-213ENST00000488973 ABCA13Q86UQ4 5058 aa9.22□□□□□ -0.93
HMG20B-213ENST00000488973 J3QL48 77 aa9.21□□□□□ -0.94
HMG20B-213ENST00000488973 CAMK2N1Q7Z7J9 78 aa9.06□□□□□ -0.96
HMG20B-213ENST00000488973 MUC17Q685J3 4493 aa9.05□□□□□ -0.96
HMG20B-213ENST00000488973 LORP23490 312 aaPredicted RBP9.02□□□□□ -0.97
HMG20B-213ENST00000488973 KRTAP4-1Q9BYQ7 146 aa8.86□□□□□ -0.99
HMG20B-213ENST00000488973 PP632Q6XCG6 107 aa8.85□□□□□ -0.99
HMG20B-213ENST00000488973 KRTAP19-2Q3LHN2 52 aa8.8□□□□□ -1
HMG20B-213ENST00000488973 PRO2289Q9P1D8 64 aa8.79□□□□□ -1
HMG20B-213ENST00000488973 PCLOQ9Y6V0 5065 aa8.76□□□□□ -1.01
HMG20B-213ENST00000488973 HERC1Q15751 4861 aa8.65□□□□□ -1.02
HMG20B-213ENST00000488973 HMCN2Q8NDA2 5059 aa8.65□□□□□ -1.02
HMG20B-213ENST00000488973 FLGP20930 4061 aaPredicted RBP8.59□□□□□ -1.03
HMG20B-213ENST00000488973 SPRR5A0A1B0GTR4 108 aa8.58□□□□□ -1.04
HMG20B-213ENST00000488973 KRTAP23-1A1A580 65 aa8.52□□□□□ -1.05
HMG20B-213ENST00000488973 TNP1P09430 55 aa8.51□□□□□ -1.05
HMG20B-213ENST00000488973 INE1O15225 51 aa8.46□□□□□ -1.06
HMG20B-213ENST00000488973 MUC2Q02817 5179 aa8.42□□□□□ -1.06
HMG20B-213ENST00000488973 LCE2CQ5TA81 110 aa8.32□□□□□ -1.08
HMG20B-213ENST00000488973 SPRR2GQ9BYE4 73 aa8.21□□□□□ -1.09
HMG20B-213ENST00000488973 UBR4Q5T4S7 5183 aa8.19□□□□□ -1.1
HMG20B-213ENST00000488973 RNF213Q63HN8 5207 aa8.18□□□□□ -1.1
HMG20B-213ENST00000488973 MT1HP80294 61 aa8.12□□□□□ -1.11
HMG20B-213ENST00000488973 KRTAP19-1Q8IUB9 90 aa8.12□□□□□ -1.11
HMG20B-213ENST00000488973 FAT4Q6V0I7 4981 aa8.07□□□□□ -1.12
HMG20B-213ENST00000488973 M0R2T5 61 aa8.03□□□□□ -1.12
HMG20B-213ENST00000488973 LCE3AQ5TA76 89 aa7.99□□□□□ -1.13
HMG20B-213ENST00000488973 KRTAP9-8Q9BYQ0 159 aa7.88□□□□□ -1.15
HMG20B-213ENST00000488973 MT2AP02795 61 aa7.87□□□□□ -1.15
HMG20B-213ENST00000488973 MT1FP04733 61 aa7.84□□□□□ -1.15
HMG20B-213ENST00000488973 KRTAP8-1Q8IUC2 63 aa7.84□□□□□ -1.15
HMG20B-213ENST00000488973 KRTAP10-10P60014 251 aa7.83□□□□□ -1.16
HMG20B-213ENST00000488973 KRTAP19-8Q3LI54 63 aa7.8□□□□□ -1.16
HMG20B-213ENST00000488973 KRTAP10-5P60370 271 aa7.69□□□□□ -1.18
HMG20B-213ENST00000488973 MT1XP80297 61 aa7.67□□□□□ -1.18
HMG20B-213ENST00000488973 MT1BP07438 61 aa7.66□□□□□ -1.18
HMG20B-213ENST00000488973 KRTAP12-3P60328 96 aa7.62□□□□□ -1.19
HMG20B-213ENST00000488973 KRTAP10-12P60413 245 aa7.61□□□□□ -1.19
HMG20B-213ENST00000488973 LCE2AQ5TA79 106 aaPredicted RBP7.6□□□□□ -1.19
HMG20B-213ENST00000488973 KRTAP9-3Q9BYQ3 159 aa7.59□□□□□ -1.19
HMG20B-213ENST00000488973 KRTAP10-7P60409 375 aaPredicted RBP7.46□□□□□ -1.22
HMG20B-213ENST00000488973 LCE2BO14633 110 aa7.31□□□□□ -1.24
HMG20B-213ENST00000488973 LCE3CQ5T5A8 94 aa7.2□□□□□ -1.26
HMG20B-213ENST00000488973 KRTAP19-5Q3LI72 72 aa7.2□□□□□ -1.26
HMG20B-213ENST00000488973 USH2AO75445 5202 aa6.99□□□□□ -1.29
HMG20B-213ENST00000488973 KRTAP9-6A8MVA2 160 aa6.93□□□□□ -1.3
HMG20B-213ENST00000488973 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
HMG20B-213ENST00000488973 KRTAP4-8Q9BYQ9 185 aa6.91□□□□□ -1.3
HMG20B-213ENST00000488973 KMT2DO14686 5537 aa6.91□□□□□ -1.3
HMG20B-213ENST00000488973 KRTAP19-7Q3SYF9 63 aa6.84□□□□□ -1.32
HMG20B-213ENST00000488973 KRTAP2-3P0C7H8 128 aa6.83□□□□□ -1.32
HMG20B-213ENST00000488973 KRTAP2-4Q9BYR9 128 aa6.83□□□□□ -1.32
HMG20B-213ENST00000488973 KRTAP2-1Q9BYU5 128 aa6.83□□□□□ -1.32
HMG20B-213ENST00000488973 KRTAP19-4Q3LI73 84 aa6.82□□□□□ -1.32
HMG20B-213ENST00000488973 KRTAP19-6Q3LI70 58 aa6.8□□□□□ -1.32
HMG20B-213ENST00000488973 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
HMG20B-213ENST00000488973 SSPOA2VEC9 5147 aa6.75□□□□□ -1.33
HMG20B-213ENST00000488973 KRTAP4-7Q9BYR0 210 aa6.72□□□□□ -1.33
HMG20B-213ENST00000488973 MT1LQ93083 61 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms