RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 ATMQ13315 3056 aa1.07□□□□□ -2.24
VPS8-224ENST00000488255 BOD1L1Q8NFC6 3051 aa1.06□□□□□ -2.24
VPS8-224ENST00000488255 UTP20O75691 2785 aaKnown RBP1.06□□□□□ -2.24
VPS8-224ENST00000488255 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
VPS8-224ENST00000488255 ZFHX4Q86UP3 3567 aa1.06□□□□□ -2.24
VPS8-224ENST00000488255 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
VPS8-224ENST00000488255 DMDP11532 3685 aa1.06□□□□□ -2.24
VPS8-224ENST00000488255 DMXL1Q9Y485 3027 aa1.06□□□□□ -2.24
VPS8-224ENST00000488255 LOC400499M0QZD8 3231 aa1.06□□□□□ -2.24
VPS8-224ENST00000488255 GCN1Q92616 2671 aaKnown RBP1.05□□□□□ -2.24
VPS8-224ENST00000488255 SPENQ96T58 3664 aaKnown RBP1.05□□□□□ -2.24
VPS8-224ENST00000488255 SMG1Q96Q15 3661 aaKnown RBP1.04□□□□□ -2.24
VPS8-224ENST00000488255 EYSQ5T1H1 3165 aa1.04□□□□□ -2.24
VPS8-224ENST00000488255 NSD1Q96L73 2696 aaPredicted RBP1.04□□□□□ -2.24
VPS8-224ENST00000488255 MXRA5Q9NR99 2828 aa1.04□□□□□ -2.24
VPS8-224ENST00000488255 ANKRD11Q6UB99 2663 aaPredicted RBP1.03□□□□□ -2.24
VPS8-224ENST00000488255 MYO15AQ9UKN7 3530 aa1.03□□□□□ -2.24
VPS8-224ENST00000488255 DEFB4AO15263 64 aa1.03□□□□□ -2.24
VPS8-224ENST00000488255 ITPR1Q14643 2758 aa1.03□□□□□ -2.24
VPS8-224ENST00000488255 FBN2P35556 2912 aa1.03□□□□□ -2.24
VPS8-224ENST00000488255 COL7A1Q02388 2944 aa1.03□□□□□ -2.24
VPS8-224ENST00000488255 CFAP46Q8IYW2 2715 aa1.02□□□□□ -2.25
VPS8-224ENST00000488255 CSMD1Q96PZ7 3565 aa1.02□□□□□ -2.25
VPS8-224ENST00000488255 DNAH11Q96DT5 4516 aa1.02□□□□□ -2.25
VPS8-224ENST00000488255 SPG11Q96JI7 2443 aa1.01□□□□□ -2.25
VPS8-224ENST00000488255 PRM1P04553 51 aa1.01□□□□□ -2.25
VPS8-224ENST00000488255 NIPBLQ6KC79 2804 aaeCLIP1.01□□□□□ -2.25
VPS8-224ENST00000488255 PKD1L1Q8TDX9 2849 aa1□□□□□ -2.25
VPS8-224ENST00000488255 CENPEQ02224 2701 aa1□□□□□ -2.25
VPS8-224ENST00000488255 BSNQ9UPA5 3926 aa1□□□□□ -2.25
VPS8-224ENST00000488255 ACACBO00763 2458 aa1□□□□□ -2.25
VPS8-224ENST00000488255 NBEAL2Q6ZNJ1 2754 aa1□□□□□ -2.25
VPS8-224ENST00000488255 ASPMQ8IZT6 3477 aa0.99□□□□□ -2.25
VPS8-224ENST00000488255 AKAP9Q99996 3911 aa0.99□□□□□ -2.25
VPS8-224ENST00000488255 NBPF19A0A087WUL8 3843 aa0.99□□□□□ -2.25
VPS8-224ENST00000488255 CEP295Q9C0D2 2601 aa0.99□□□□□ -2.25
VPS8-224ENST00000488255 UNC79Q9P2D8 2635 aa0.99□□□□□ -2.25
VPS8-224ENST00000488255 NOTCH1P46531 2555 aa0.99□□□□□ -2.25
VPS8-224ENST00000488255 ZFYVE26Q68DK2 2539 aa0.99□□□□□ -2.25
VPS8-224ENST00000488255 SPTAN1Q13813 2472 aaKnown RBP0.99□□□□□ -2.25
VPS8-224ENST00000488255 PDZD2O15018 2839 aa0.99□□□□□ -2.25
VPS8-224ENST00000488255 TEX15Q9BXT5 2789 aa0.99□□□□□ -2.25
VPS8-224ENST00000488255 RELNP78509 3460 aa0.99□□□□□ -2.25
VPS8-224ENST00000488255 TLN1Q9Y490 2541 aaKnown RBP0.98□□□□□ -2.25
VPS8-224ENST00000488255 SVEP1Q4LDE5 3571 aa0.98□□□□□ -2.25
VPS8-224ENST00000488255 SACSQ9NZJ4 4579 aa0.98□□□□□ -2.25
VPS8-224ENST00000488255 TENM3Q9P273 2699 aa0.98□□□□□ -2.25
VPS8-224ENST00000488255 MT1AP04731 61 aa0.98□□□□□ -2.25
VPS8-224ENST00000488255 DOPEY1Q5JWR5 2465 aa0.97□□□□□ -2.25
VPS8-224ENST00000488255 VPS13CQ709C8 3753 aa0.97□□□□□ -2.25
VPS8-224ENST00000488255 SPRR2BP35325 72 aa0.97□□□□□ -2.25
VPS8-224ENST00000488255 FLNBO75369 2602 aaKnown RBP0.96□□□□□ -2.26
VPS8-224ENST00000488255 DYNC2H1Q8NCM8 4307 aaKnown RBP0.96□□□□□ -2.26
VPS8-224ENST00000488255 LAMA5O15230 3695 aa0.96□□□□□ -2.26
VPS8-224ENST00000488255 TLN2Q9Y4G6 2542 aa0.96□□□□□ -2.26
VPS8-224ENST00000488255 ANK2Q01484 3957 aa0.96□□□□□ -2.26
VPS8-224ENST00000488255 KMT2AQ03164 3969 aa0.96□□□□□ -2.26
VPS8-224ENST00000488255 LYSTQ99698 3801 aa0.95□□□□□ -2.26
VPS8-224ENST00000488255 TGP01266 2768 aa0.95□□□□□ -2.26
VPS8-224ENST00000488255 MYO18BQ8IUG5 2567 aa0.95□□□□□ -2.26
VPS8-224ENST00000488255 SPRR2DP22532 72 aa0.95□□□□□ -2.26
VPS8-224ENST00000488255 SPRR2AP35326 72 aa0.95□□□□□ -2.26
VPS8-224ENST00000488255 PRKDCP78527 4128 aaKnown RBP0.95□□□□□ -2.26
VPS8-224ENST00000488255 ZANQ9Y493 2812 aa0.95□□□□□ -2.26
VPS8-224ENST00000488255 MYCBP2O75592 4640 aa0.94□□□□□ -2.26
VPS8-224ENST00000488255 MUC3AQ02505 3323 aa0.94□□□□□ -2.26
VPS8-224ENST00000488255 MYO9AB2RTY4 2548 aa0.94□□□□□ -2.26
VPS8-224ENST00000488255 VPS13BQ7Z7G8 4022 aa0.94□□□□□ -2.26
VPS8-224ENST00000488255 USP9XQ93008 2570 aaPredicted RBP0.94□□□□□ -2.26
VPS8-224ENST00000488255 STAB1Q9NY15 2570 aa0.94□□□□□ -2.26
VPS8-224ENST00000488255 SMR3BP02814 79 aaPredicted RBP0.93□□□□□ -2.26
VPS8-224ENST00000488255 NBEAL1Q6ZS30 2694 aa0.93□□□□□ -2.26
VPS8-224ENST00000488255 DNAH8Q96JB1 4490 aa0.93□□□□□ -2.26
VPS8-224ENST00000488255 CSMD2Q7Z408 3487 aa0.93□□□□□ -2.26
VPS8-224ENST00000488255 DNAH3Q8TD57 4116 aa0.93□□□□□ -2.26
VPS8-224ENST00000488255 HIVEP1P15822 2718 aa0.92□□□□□ -2.26
VPS8-224ENST00000488255 KRTAP19-3Q7Z4W3 81 aa0.92□□□□□ -2.26
VPS8-224ENST00000488255 FAT2Q9NYQ8 4349 aa0.91□□□□□ -2.26
VPS8-224ENST00000488255 ITPR2Q14571 2701 aa0.91□□□□□ -2.26
VPS8-224ENST00000488255 ANK3Q12955 4377 aaKnown RBP0.91□□□□□ -2.26
VPS8-224ENST00000488255 ZNF469Q96JG9 3925 aaPredicted RBP0.91□□□□□ -2.26
VPS8-224ENST00000488255 TNXBP22105 4242 aa0.91□□□□□ -2.26
VPS8-224ENST00000488255 FASNP49327 2511 aaKnown RBP0.9□□□□□ -2.26
VPS8-224ENST00000488255 IGSF10Q6WRI0 2623 aa0.9□□□□□ -2.27
VPS8-224ENST00000488255 TEP1Q99973 2627 aaKnown RBP0.89□□□□□ -2.27
VPS8-224ENST00000488255 DNAH2Q9P225 4427 aa0.88□□□□□ -2.27
VPS8-224ENST00000488255 FLNAP21333 2647 aaKnown RBP0.88□□□□□ -2.27
VPS8-224ENST00000488255 CUBNO60494 3623 aa0.88□□□□□ -2.27
VPS8-224ENST00000488255 MGAM2Q2M2H8 2515 aa0.88□□□□□ -2.27
VPS8-224ENST00000488255 TRRAPQ9Y4A5 3859 aa0.88□□□□□ -2.27
VPS8-224ENST00000488255 MAST4O15021 2626 aa0.87□□□□□ -2.27
VPS8-224ENST00000488255 HUWE1Q7Z6Z7 4374 aaKnown RBP0.87□□□□□ -2.27
VPS8-224ENST00000488255 DNAH1Q9P2D7 4330 aa0.86□□□□□ -2.27
VPS8-224ENST00000488255 KRTAP19-5Q3LI72 72 aa0.86□□□□□ -2.27
VPS8-224ENST00000488255 FRAS1Q86XX4 4008 aa0.86□□□□□ -2.27
VPS8-224ENST00000488255 DNAH7Q8WXX0 4024 aa0.86□□□□□ -2.27
VPS8-224ENST00000488255 DNAH10Q8IVF4 4471 aa0.85□□□□□ -2.27
VPS8-224ENST00000488255 CMYA5Q8N3K9 4069 aa0.85□□□□□ -2.27
VPS8-224ENST00000488255 PKHD1L1Q86WI1 4243 aa0.85□□□□□ -2.27
VPS8-224ENST00000488255 HECTD4Q9Y4D8 3996 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms