RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 S4R3F8 94 aa6.37□□□□□ -1.39
TMEM39B-208ENST00000487305 KRTAP10-6P60371 365 aaPredicted RBP6.35□□□□□ -1.39
TMEM39B-208ENST00000487305 XP32Q5T750 250 aa6.35□□□□□ -1.39
TMEM39B-208ENST00000487305 ROMO1P60602 79 aa6.35□□□□□ -1.39
TMEM39B-208ENST00000487305 LCE2BO14633 110 aa6.34□□□□□ -1.39
TMEM39B-208ENST00000487305 Q5VSD8 79 aa6.33□□□□□ -1.4
TMEM39B-208ENST00000487305 TNXBP22105 4242 aa6.32□□□□□ -1.4
TMEM39B-208ENST00000487305 FAT3Q8TDW7 4589 aa6.31□□□□□ -1.4
TMEM39B-208ENST00000487305 RYR2Q92736 4967 aa6.3□□□□□ -1.4
TMEM39B-208ENST00000487305 DMBT1Q9UGM3 2413 aaPredicted RBP6.26□□□□□ -1.41
TMEM39B-208ENST00000487305 HSPG2P98160 4391 aa6.21□□□□□ -1.41
TMEM39B-208ENST00000487305 KRTAP13-4Q3LI77 160 aa6.21□□□□□ -1.42
TMEM39B-208ENST00000487305 LRP1Q07954 4544 aaKnown RBP6.2□□□□□ -1.42
TMEM39B-208ENST00000487305 M0QZ58 72 aa6.19□□□□□ -1.42
TMEM39B-208ENST00000487305 TPRXLQ17RH7 258 aa6.19□□□□□ -1.42
TMEM39B-208ENST00000487305 A0A0D9SG42 100 aa6.17□□□□□ -1.42
TMEM39B-208ENST00000487305 MT1HL1P0DM35 61 aa6.16□□□□□ -1.42
TMEM39B-208ENST00000487305 P0C880 135 aa6.16□□□□□ -1.42
TMEM39B-208ENST00000487305 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
TMEM39B-208ENST00000487305 RYR1P21817 5038 aa6.11□□□□□ -1.43
TMEM39B-208ENST00000487305 KMT2CQ8NEZ4 4911 aaKnown RBP6.08□□□□□ -1.44
TMEM39B-208ENST00000487305 KRTAP12-1P59990 96 aa6.06□□□□□ -1.44
TMEM39B-208ENST00000487305 BIRC6Q9NR09 4857 aa6.06□□□□□ -1.44
TMEM39B-208ENST00000487305 KRTAP12-2P59991 146 aa6.05□□□□□ -1.44
TMEM39B-208ENST00000487305 LCE2AQ5TA79 106 aaPredicted RBP6.03□□□□□ -1.44
TMEM39B-208ENST00000487305 SPINT4Q6UDR6 99 aa6.02□□□□□ -1.45
TMEM39B-208ENST00000487305 H3BS24 57 aa6.01□□□□□ -1.45
TMEM39B-208ENST00000487305 KRTAP17-1Q9BYP8 105 aa6.01□□□□□ -1.45
TMEM39B-208ENST00000487305 SEC61BP60468 96 aaKnown RBP5.99□□□□□ -1.45
TMEM39B-208ENST00000487305 MYCBP2O75592 4640 aa5.98□□□□□ -1.45
TMEM39B-208ENST00000487305 RYR3Q15413 4870 aa5.96□□□□□ -1.46
TMEM39B-208ENST00000487305 J3QL48 77 aa5.92□□□□□ -1.46
TMEM39B-208ENST00000487305 R4GN34 69 aa5.92□□□□□ -1.46
TMEM39B-208ENST00000487305 C10orf95Q9H7T3 257 aa5.9□□□□□ -1.46
TMEM39B-208ENST00000487305 KIAA1109Q2LD37 5005 aa5.87□□□□□ -1.47
TMEM39B-208ENST00000487305 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
TMEM39B-208ENST00000487305 LRP2P98164 4655 aa5.85□□□□□ -1.47
TMEM39B-208ENST00000487305 LCE2CQ5TA81 110 aa5.83□□□□□ -1.48
TMEM39B-208ENST00000487305 EPPK1P58107 5090 aaKnown RBP5.76□□□□□ -1.49
TMEM39B-208ENST00000487305 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
TMEM39B-208ENST00000487305 KRTAP4-6Q9BYQ5 205 aa5.75□□□□□ -1.49
TMEM39B-208ENST00000487305 LPAP08519 4548 aa5.75□□□□□ -1.49
TMEM39B-208ENST00000487305 PP632Q6XCG6 107 aa5.74□□□□□ -1.49
TMEM39B-208ENST00000487305 LORP23490 312 aaPredicted RBP5.73□□□□□ -1.49
TMEM39B-208ENST00000487305 HERC2O95714 4834 aa5.73□□□□□ -1.49
TMEM39B-208ENST00000487305 MUC17Q685J3 4493 aa5.67□□□□□ -1.5
TMEM39B-208ENST00000487305 NDUFAF8A1L188 74 aa5.67□□□□□ -1.5
TMEM39B-208ENST00000487305 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
TMEM39B-208ENST00000487305 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.5
TMEM39B-208ENST00000487305 KRTAP4-1Q9BYQ7 146 aa5.65□□□□□ -1.51
TMEM39B-208ENST00000487305 ABCA13Q86UQ4 5058 aa5.63□□□□□ -1.51
TMEM39B-208ENST00000487305 CAMK2N1Q7Z7J9 78 aa5.62□□□□□ -1.51
TMEM39B-208ENST00000487305 PLAC4Q8WY50 150 aa5.62□□□□□ -1.51
TMEM39B-208ENST00000487305 KRTAP23-1A1A580 65 aa5.59□□□□□ -1.52
TMEM39B-208ENST00000487305 FLGP20930 4061 aaPredicted RBP5.5□□□□□ -1.53
TMEM39B-208ENST00000487305 PCLOQ9Y6V0 5065 aa5.49□□□□□ -1.53
TMEM39B-208ENST00000487305 TNP1P09430 55 aa5.48□□□□□ -1.53
TMEM39B-208ENST00000487305 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
TMEM39B-208ENST00000487305 HERC1Q15751 4861 aa5.4□□□□□ -1.54
TMEM39B-208ENST00000487305 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
TMEM39B-208ENST00000487305 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
TMEM39B-208ENST00000487305 SPRR5A0A1B0GTR4 108 aa5.27□□□□□ -1.57
TMEM39B-208ENST00000487305 KRTAP4-8Q9BYQ9 185 aa5.24□□□□□ -1.57
TMEM39B-208ENST00000487305 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
TMEM39B-208ENST00000487305 HMCN2Q8NDA2 5059 aa5.19□□□□□ -1.58
TMEM39B-208ENST00000487305 M0R2T5 61 aa5.17□□□□□ -1.58
TMEM39B-208ENST00000487305 MUC2Q02817 5179 aa5.16□□□□□ -1.58
TMEM39B-208ENST00000487305 MT1HP80294 61 aa5.14□□□□□ -1.59
TMEM39B-208ENST00000487305 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
TMEM39B-208ENST00000487305 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
TMEM39B-208ENST00000487305 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.09□□□□□ -1.59
TMEM39B-208ENST00000487305 KRTAP9-6A0A140TA67 174 aa5.09□□□□□ -1.59
TMEM39B-208ENST00000487305 KRTAP10-10P60014 251 aa5.09□□□□□ -1.59
TMEM39B-208ENST00000487305 MT2AP02795 61 aa5.08□□□□□ -1.6
TMEM39B-208ENST00000487305 KRTAP8-1Q8IUC2 63 aa5.05□□□□□ -1.6
TMEM39B-208ENST00000487305 MT1FP04733 61 aa5.04□□□□□ -1.6
TMEM39B-208ENST00000487305 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
TMEM39B-208ENST00000487305 KRTAP9-8Q9BYQ0 159 aa5.04□□□□□ -1.6
TMEM39B-208ENST00000487305 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
TMEM39B-208ENST00000487305 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
TMEM39B-208ENST00000487305 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
TMEM39B-208ENST00000487305 RNF213Q63HN8 5207 aa4.93□□□□□ -1.62
TMEM39B-208ENST00000487305 MT1BP07438 61 aa4.93□□□□□ -1.62
TMEM39B-208ENST00000487305 KRTAP10-5P60370 271 aa4.93□□□□□ -1.62
TMEM39B-208ENST00000487305 MT1XP80297 61 aa4.92□□□□□ -1.62
TMEM39B-208ENST00000487305 UBR4Q5T4S7 5183 aa4.91□□□□□ -1.62
TMEM39B-208ENST00000487305 PRO2289Q9P1D8 64 aa4.9□□□□□ -1.62
TMEM39B-208ENST00000487305 KRTAP10-12P60413 245 aa4.9□□□□□ -1.63
TMEM39B-208ENST00000487305 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
TMEM39B-208ENST00000487305 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
TMEM39B-208ENST00000487305 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
TMEM39B-208ENST00000487305 KRTAP9-3Q9BYQ3 159 aa4.84□□□□□ -1.64
TMEM39B-208ENST00000487305 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
TMEM39B-208ENST00000487305 INE1O15225 51 aa4.79□□□□□ -1.64
TMEM39B-208ENST00000487305 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
TMEM39B-208ENST00000487305 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
TMEM39B-208ENST00000487305 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
TMEM39B-208ENST00000487305 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
TMEM39B-208ENST00000487305 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
TMEM39B-208ENST00000487305 CRCT1Q9UGL9 99 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms