RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 DNAH17Q9UFH2 4485 aa3.77□□□□□ -1.81
COL6A4P1-202ENST00000487147 VPS13DQ5THJ4 4388 aa3.76□□□□□ -1.81
COL6A4P1-202ENST00000487147 LYSTQ99698 3801 aa3.75□□□□□ -1.81
COL6A4P1-202ENST00000487147 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
COL6A4P1-202ENST00000487147 FRAS1Q86XX4 4008 aa3.74□□□□□ -1.81
COL6A4P1-202ENST00000487147 DNAH3Q8TD57 4116 aa3.73□□□□□ -1.81
COL6A4P1-202ENST00000487147 A0A1B0GVY2 172 aa3.72□□□□□ -1.81
COL6A4P1-202ENST00000487147 STARD9Q9P2P6 4700 aa3.72□□□□□ -1.81
COL6A4P1-202ENST00000487147 DNAH2Q9P225 4427 aa3.7□□□□□ -1.82
COL6A4P1-202ENST00000487147 LRP1BQ9NZR2 4599 aa3.7□□□□□ -1.82
COL6A4P1-202ENST00000487147 TNP1P09430 55 aa3.7□□□□□ -1.82
COL6A4P1-202ENST00000487147 KRTAP23-1A1A580 65 aa3.69□□□□□ -1.82
COL6A4P1-202ENST00000487147 KMT2AQ03164 3969 aa3.67□□□□□ -1.82
COL6A4P1-202ENST00000487147 CMYA5Q8N3K9 4069 aa3.67□□□□□ -1.82
COL6A4P1-202ENST00000487147 KRTAP10-4P60372 401 aaPredicted RBP3.66□□□□□ -1.82
COL6A4P1-202ENST00000487147 DNAH7Q8WXX0 4024 aa3.65□□□□□ -1.82
COL6A4P1-202ENST00000487147 DNAH5Q8TE73 4624 aa3.65□□□□□ -1.82
COL6A4P1-202ENST00000487147 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
COL6A4P1-202ENST00000487147 HECTD4Q9Y4D8 3996 aa3.64□□□□□ -1.83
COL6A4P1-202ENST00000487147 M0R2T5 61 aa3.63□□□□□ -1.83
COL6A4P1-202ENST00000487147 VPS13BQ7Z7G8 4022 aa3.6□□□□□ -1.83
COL6A4P1-202ENST00000487147 PRKDCP78527 4128 aaKnown RBP3.59□□□□□ -1.83
COL6A4P1-202ENST00000487147 DYNC2H1Q8NCM8 4307 aaKnown RBP3.59□□□□□ -1.83
COL6A4P1-202ENST00000487147 DNAH6Q9C0G6 4158 aa3.58□□□□□ -1.84
COL6A4P1-202ENST00000487147 FAT1Q14517 4588 aa3.58□□□□□ -1.84
COL6A4P1-202ENST00000487147 SACSQ9NZJ4 4579 aa3.53□□□□□ -1.84
COL6A4P1-202ENST00000487147 DYNC1H1Q14204 4646 aaKnown RBP3.51□□□□□ -1.85
COL6A4P1-202ENST00000487147 MT1HL1P0DM35 61 aa3.51□□□□□ -1.85
COL6A4P1-202ENST00000487147 INE1O15225 51 aa3.5□□□□□ -1.85
COL6A4P1-202ENST00000487147 MYCBP2O75592 4640 aa3.48□□□□□ -1.85
COL6A4P1-202ENST00000487147 DNHD1Q96M86 4753 aa3.46□□□□□ -1.86
COL6A4P1-202ENST00000487147 APOBP04114 4563 aaKnown RBP3.44□□□□□ -1.86
COL6A4P1-202ENST00000487147 FAT2Q9NYQ8 4349 aa3.41□□□□□ -1.86
COL6A4P1-202ENST00000487147 LRP1Q07954 4544 aaKnown RBP3.37□□□□□ -1.87
COL6A4P1-202ENST00000487147 HYDINQ4G0P3 5121 aa3.36□□□□□ -1.87
COL6A4P1-202ENST00000487147 PKHD1P08F94 4074 aa3.36□□□□□ -1.87
COL6A4P1-202ENST00000487147 FAT3Q8TDW7 4589 aa3.34□□□□□ -1.87
COL6A4P1-202ENST00000487147 KRTAP10-10P60014 251 aa3.34□□□□□ -1.87
COL6A4P1-202ENST00000487147 PKD1P98161 4303 aa3.32□□□□□ -1.88
COL6A4P1-202ENST00000487147 RYR1P21817 5038 aa3.27□□□□□ -1.89
COL6A4P1-202ENST00000487147 KRTAP4-5Q9BYR2 181 aa3.27□□□□□ -1.89
COL6A4P1-202ENST00000487147 KRTAP4-1Q9BYQ7 146 aa3.26□□□□□ -1.89
COL6A4P1-202ENST00000487147 LRP2P98164 4655 aa3.26□□□□□ -1.89
COL6A4P1-202ENST00000487147 HSPG2P98160 4391 aa3.26□□□□□ -1.89
COL6A4P1-202ENST00000487147 PKHD1L1Q86WI1 4243 aa3.24□□□□□ -1.89
COL6A4P1-202ENST00000487147 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
COL6A4P1-202ENST00000487147 KIAA1109Q2LD37 5005 aa3.22□□□□□ -1.89
COL6A4P1-202ENST00000487147 KRTAP17-1Q9BYP8 105 aa3.19□□□□□ -1.9
COL6A4P1-202ENST00000487147 KMT2CQ8NEZ4 4911 aaKnown RBP3.17□□□□□ -1.9
COL6A4P1-202ENST00000487147 RYR3Q15413 4870 aa3.16□□□□□ -1.9
COL6A4P1-202ENST00000487147 KRTAP12-3P60328 96 aa3.15□□□□□ -1.91
COL6A4P1-202ENST00000487147 KRTAP10-12P60413 245 aa3.14□□□□□ -1.91
COL6A4P1-202ENST00000487147 TNXBP22105 4242 aa3.14□□□□□ -1.91
COL6A4P1-202ENST00000487147 RYR2Q92736 4967 aa3.12□□□□□ -1.91
COL6A4P1-202ENST00000487147 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
COL6A4P1-202ENST00000487147 LPAP08519 4548 aa3.09□□□□□ -1.91
COL6A4P1-202ENST00000487147 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.92
COL6A4P1-202ENST00000487147 KRTAP19-4Q3LI73 84 aa3.05□□□□□ -1.92
COL6A4P1-202ENST00000487147 KRTAP8-1Q8IUC2 63 aa3.03□□□□□ -1.92
COL6A4P1-202ENST00000487147 KRTAP19-1Q8IUB9 90 aa3□□□□□ -1.93
COL6A4P1-202ENST00000487147 MT2AP02795 61 aa2.97□□□□□ -1.93
COL6A4P1-202ENST00000487147 KRTAP19-2Q3LHN2 52 aa2.97□□□□□ -1.93
COL6A4P1-202ENST00000487147 MT1FP04733 61 aa2.96□□□□□ -1.94
COL6A4P1-202ENST00000487147 MT1HP80294 61 aa2.96□□□□□ -1.94
COL6A4P1-202ENST00000487147 MUC17Q685J3 4493 aa2.94□□□□□ -1.94
COL6A4P1-202ENST00000487147 HERC2O95714 4834 aa2.92□□□□□ -1.94
COL6A4P1-202ENST00000487147 FLGP20930 4061 aaPredicted RBP2.91□□□□□ -1.94
COL6A4P1-202ENST00000487147 BIRC6Q9NR09 4857 aa2.9□□□□□ -1.95
COL6A4P1-202ENST00000487147 ABCA13Q86UQ4 5058 aa2.88□□□□□ -1.95
COL6A4P1-202ENST00000487147 KRTAP19-8Q3LI54 63 aa2.88□□□□□ -1.95
COL6A4P1-202ENST00000487147 LCE4AQ5TA78 99 aa2.88□□□□□ -1.95
COL6A4P1-202ENST00000487147 LCE3CQ5T5A8 94 aa2.87□□□□□ -1.95
COL6A4P1-202ENST00000487147 KRTAP10-7P60409 375 aaPredicted RBP2.86□□□□□ -1.95
COL6A4P1-202ENST00000487147 MT1XP80297 61 aa2.86□□□□□ -1.95
COL6A4P1-202ENST00000487147 KRTAP19-5Q3LI72 72 aa2.86□□□□□ -1.95
COL6A4P1-202ENST00000487147 KRTAP10-5P60370 271 aa2.86□□□□□ -1.95
COL6A4P1-202ENST00000487147 KRTAP9-6A0A140TA67 174 aa2.84□□□□□ -1.96
COL6A4P1-202ENST00000487147 KRTAP9-7A8MTY7 169 aa2.84□□□□□ -1.96
COL6A4P1-202ENST00000487147 MT1BP07438 61 aa2.83□□□□□ -1.96
COL6A4P1-202ENST00000487147 EPPK1P58107 5090 aaKnown RBP2.83□□□□□ -1.96
COL6A4P1-202ENST00000487147 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
COL6A4P1-202ENST00000487147 HERC1Q15751 4861 aa2.82□□□□□ -1.96
COL6A4P1-202ENST00000487147 MUC2Q02817 5179 aa2.81□□□□□ -1.96
COL6A4P1-202ENST00000487147 KRTAP9-8Q9BYQ0 159 aa2.81□□□□□ -1.96
COL6A4P1-202ENST00000487147 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.96
COL6A4P1-202ENST00000487147 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
COL6A4P1-202ENST00000487147 FAT4Q6V0I7 4981 aa2.73□□□□□ -1.97
COL6A4P1-202ENST00000487147 HMCN2Q8NDA2 5059 aa2.73□□□□□ -1.97
COL6A4P1-202ENST00000487147 LCE5AQ5TCM9 118 aa2.7□□□□□ -1.98
COL6A4P1-202ENST00000487147 KRTAP9-3Q9BYQ3 159 aa2.69□□□□□ -1.98
COL6A4P1-202ENST00000487147 KRTAP9-2Q9BYQ4 174 aa2.69□□□□□ -1.98
COL6A4P1-202ENST00000487147 KRTAP4-8A0A0G2JLE6 195 aa2.68□□□□□ -1.98
COL6A4P1-202ENST00000487147 KRTAP4-8Q9BYQ9 185 aa2.68□□□□□ -1.98
COL6A4P1-202ENST00000487147 PCLOQ9Y6V0 5065 aa2.68□□□□□ -1.98
COL6A4P1-202ENST00000487147 UBR4Q5T4S7 5183 aa2.65□□□□□ -1.98
COL6A4P1-202ENST00000487147 KRTAP4-7Q9BYR0 210 aa2.62□□□□□ -1.99
COL6A4P1-202ENST00000487147 RNF213Q63HN8 5207 aa2.6□□□□□ -1.99
COL6A4P1-202ENST00000487147 KRTAP12-4P60329 112 aa2.59□□□□□ -2
COL6A4P1-202ENST00000487147 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
COL6A4P1-202ENST00000487147 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms