RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
SNRNP40-205ENST00000486941 RAB37Q96AX2 223 aa1.89□□□□□ -2.11
SNRNP40-205ENST00000486941 HIST1H4GQ99525 98 aa1.89□□□□□ -2.11
SNRNP40-205ENST00000486941 PRO0628Q9UI54 55 aa1.89□□□□□ -2.11
SNRNP40-205ENST00000486941 TRBV7-4A0A0J9YYF1 115 aa1.88□□□□□ -2.11
SNRNP40-205ENST00000486941 A8MWP4 228 aa1.88□□□□□ -2.11
SNRNP40-205ENST00000486941 ANKRD29Q8N6D5 301 aa1.88□□□□□ -2.11
SNRNP40-205ENST00000486941 CYSTM1Q9H1C7 97 aa1.88□□□□□ -2.11
SNRNP40-205ENST00000486941 LINC00472Q9H8W2 130 aa1.88□□□□□ -2.11
SNRNP40-205ENST00000486941 IGHV6-1A0A0B4J1U7 121 aa1.87□□□□□ -2.11
SNRNP40-205ENST00000486941 A0A0B4J2C4 111 aa1.87□□□□□ -2.11
SNRNP40-205ENST00000486941 H3BQ85 93 aa1.87□□□□□ -2.11
SNRNP40-205ENST00000486941 COX7CP15954 63 aa1.87□□□□□ -2.11
SNRNP40-205ENST00000486941 SPINK7P58062 85 aa1.87□□□□□ -2.11
SNRNP40-205ENST00000486941 C4orf26Q17RF5 130 aa1.87□□□□□ -2.11
SNRNP40-205ENST00000486941 C8orf87E5RJ46 101 aa1.86□□□□□ -2.11
SNRNP40-205ENST00000486941 TMEM258P61165 79 aa1.86□□□□□ -2.11
SNRNP40-205ENST00000486941 DEFB116Q30KQ4 102 aa1.86□□□□□ -2.11
SNRNP40-205ENST00000486941 ZCCHC13Q8WW36 166 aaKnown RBP1.86□□□□□ -2.11
SNRNP40-205ENST00000486941 A0A1B0GVX0 72 aa1.85□□□□□ -2.11
SNRNP40-205ENST00000486941 TMEM256-PLSCR3K7ERE1 68 aa1.85□□□□□ -2.11
SNRNP40-205ENST00000486941 TRACP01848 142 aa1.85□□□□□ -2.11
SNRNP40-205ENST00000486941 CCKP06307 115 aa1.85□□□□□ -2.11
SNRNP40-205ENST00000486941 ORMDL1Q9P0S3 153 aa1.85□□□□□ -2.11
SNRNP40-205ENST00000486941 PRO1854Q9UHT4 67 aa1.85□□□□□ -2.11
SNRNP40-205ENST00000486941 FAM236AA0A1B0GUQ0 79 aa1.84□□□□□ -2.11
SNRNP40-205ENST00000486941 FAM236BA0A1B0GV22 79 aa1.84□□□□□ -2.11
SNRNP40-205ENST00000486941 H3BT86 120 aa1.84□□□□□ -2.11
SNRNP40-205ENST00000486941 DNAL4O96015 105 aa1.84□□□□□ -2.11
SNRNP40-205ENST00000486941 ACYP1P07311 99 aa1.84□□□□□ -2.11
SNRNP40-205ENST00000486941 SCGB1C2P0DMR2 95 aa1.84□□□□□ -2.11
SNRNP40-205ENST00000486941 LYRM7Q5U5X0 104 aa1.84□□□□□ -2.11
SNRNP40-205ENST00000486941 LINC00643Q86TS7 51 aa1.84□□□□□ -2.11
SNRNP40-205ENST00000486941 PSMB2P49721 201 aa1.83□□□□□ -2.12
SNRNP40-205ENST00000486941 WFDC13Q8IUB5 93 aa1.83□□□□□ -2.12
SNRNP40-205ENST00000486941 NEBP20929 6669 aa1.83□□□□□ -2.12
SNRNP40-205ENST00000486941 NDUFB1O75438 58 aa1.82□□□□□ -2.12
SNRNP40-205ENST00000486941 COX6CP09669 75 aa1.82□□□□□ -2.12
SNRNP40-205ENST00000486941 RBM3P98179 157 aaKnown RBP1.82□□□□□ -2.12
SNRNP40-205ENST00000486941 H1FX-AS1Q4G0G2 97 aa1.82□□□□□ -2.12
SNRNP40-205ENST00000486941 SERP2Q8N6R1 65 aa1.82□□□□□ -2.12
SNRNP40-205ENST00000486941 ATOX1O00244 68 aa1.81□□□□□ -2.12
SNRNP40-205ENST00000486941 Q6ZQT0 140 aa1.81□□□□□ -2.12
SNRNP40-205ENST00000486941 DSCR8Q96T75 97 aa1.81□□□□□ -2.12
SNRNP40-205ENST00000486941 C8orf17Q9NRJ1 99 aa1.81□□□□□ -2.12
SNRNP40-205ENST00000486941 SERP1Q9Y6X1 66 aa1.81□□□□□ -2.12
SNRNP40-205ENST00000486941 IGKV3D-7A0A0C4DH55 119 aa1.8□□□□□ -2.12
SNRNP40-205ENST00000486941 A0A1B0GW54 56 aa1.8□□□□□ -2.12
SNRNP40-205ENST00000486941 H7BZZ5 65 aa1.8□□□□□ -2.12
SNRNP40-205ENST00000486941 ATXN8Q156A1 80 aa1.8□□□□□ -2.12
SNRNP40-205ENST00000486941 SMIM26A0A096LP01 95 aa1.79□□□□□ -2.12
SNRNP40-205ENST00000486941 A6NN06 94 aa1.79□□□□□ -2.12
SNRNP40-205ENST00000486941 KLKP1Q107X0 134 aa1.79□□□□□ -2.12
SNRNP40-205ENST00000486941 KRTAP20-1Q3LI63 56 aa1.79□□□□□ -2.12
SNRNP40-205ENST00000486941 BAALC-AS2P0C853 105 aa1.78□□□□□ -2.12
SNRNP40-205ENST00000486941 PRR15Q8IV56 129 aa1.78□□□□□ -2.12
SNRNP40-205ENST00000486941 LOC110117498A0A087WWA1 95 aa1.77□□□□□ -2.13
SNRNP40-205ENST00000486941 JMJD7-PLA2G4BH0Y9G9 81 aa1.77□□□□□ -2.13
SNRNP40-205ENST00000486941 PDE6GP18545 87 aa1.77□□□□□ -2.13
SNRNP40-205ENST00000486941 TMEM254Q8TBM7 123 aa1.77□□□□□ -2.13
SNRNP40-205ENST00000486941 MRPL34Q9BQ48 92 aaKnown RBP1.77□□□□□ -2.13
SNRNP40-205ENST00000486941 MUC12Q9UKN1 5478 aa1.77□□□□□ -2.13
SNRNP40-205ENST00000486941 MMP24-AS1A0A0U1RRL7 71 aa1.76□□□□□ -2.13
SNRNP40-205ENST00000486941 MT1BP07438 61 aa1.76□□□□□ -2.13
SNRNP40-205ENST00000486941 KRTAP19-8Q3LI54 63 aa1.76□□□□□ -2.13
SNRNP40-205ENST00000486941 Q5VV11 94 aa1.76□□□□□ -2.13
SNRNP40-205ENST00000486941 TRAV7A0A075B6U4 112 aa1.75□□□□□ -2.13
SNRNP40-205ENST00000486941 hDV103S1A0JD37 113 aa1.75□□□□□ -2.13
SNRNP40-205ENST00000486941 PMAIP1Q13794 54 aa1.75□□□□□ -2.13
SNRNP40-205ENST00000486941 NREPQ16612 68 aa1.75□□□□□ -2.13
SNRNP40-205ENST00000486941 C7orf65Q6ZTY9 151 aa1.75□□□□□ -2.13
SNRNP40-205ENST00000486941 SPRR2GQ9BYE4 73 aa1.75□□□□□ -2.13
SNRNP40-205ENST00000486941 NDUFS5O43920 106 aa1.74□□□□□ -2.13
SNRNP40-205ENST00000486941 ATP5EP56381 51 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-205ENST00000486941 Q1T7F1 81 aa1.74□□□□□ -2.13
SNRNP40-205ENST00000486941 Q5W150 140 aa1.74□□□□□ -2.13
SNRNP40-205ENST00000486941 A0A087WVE0 104 aa1.73□□□□□ -2.13
SNRNP40-205ENST00000486941 K7EQZ3 153 aa1.73□□□□□ -2.13
SNRNP40-205ENST00000486941 PSPHP1O15172 72 aa1.73□□□□□ -2.13
SNRNP40-205ENST00000486941 NDUFC1O43677 76 aa1.73□□□□□ -2.13
SNRNP40-205ENST00000486941 KRTAP2-3P0C7H8 128 aa1.73□□□□□ -2.13
SNRNP40-205ENST00000486941 ATP5EP2Q5VTU8 51 aa1.73□□□□□ -2.13
SNRNP40-205ENST00000486941 CSAG1Q6PB30 78 aa1.73□□□□□ -2.13
SNRNP40-205ENST00000486941 KRTAP2-4Q9BYR9 128 aa1.73□□□□□ -2.13
SNRNP40-205ENST00000486941 C14orf132Q9NPU4 83 aa1.73□□□□□ -2.13
SNRNP40-205ENST00000486941 KMT2DO14686 5537 aa1.72□□□□□ -2.13
SNRNP40-205ENST00000486941 HCG22E2RYF7 251 aa1.71□□□□□ -2.14
SNRNP40-205ENST00000486941 BPY2O14599 106 aa1.71□□□□□ -2.14
SNRNP40-205ENST00000486941 C20orf197Q8N268 126 aa1.71□□□□□ -2.14
SNRNP40-205ENST00000486941 S4R3F8 94 aa1.71□□□□□ -2.14
SNRNP40-205ENST00000486941 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
SNRNP40-205ENST00000486941 CASC2Q6XLA1 102 aa1.7□□□□□ -2.14
SNRNP40-205ENST00000486941 LCA10Q71F78 164 aa1.7□□□□□ -2.14
SNRNP40-205ENST00000486941 C1orf64Q8NEQ6 169 aa1.7□□□□□ -2.14
SNRNP40-205ENST00000486941 BRK1Q8WUW1 75 aa1.7□□□□□ -2.14
SNRNP40-205ENST00000486941 CRIPTQ9P021 101 aa1.7□□□□□ -2.14
SNRNP40-205ENST00000486941 KTN1-AS1Q86SY8 53 aa1.69□□□□□ -2.14
SNRNP40-205ENST00000486941 CYP4F30PQ9H0H9 118 aa1.69□□□□□ -2.14
SNRNP40-205ENST00000486941 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
SNRNP40-205ENST00000486941 SPRR2EP22531 72 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 1173.9 ms