RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 HECTD1Q9ULT8 2610 aa2.21□□□□□ -2.06
COPS3-209ENST00000486810 TGP01266 2768 aa2.2□□□□□ -2.06
COPS3-209ENST00000486810 HRNRQ86YZ3 2850 aaPredicted RBP2.2□□□□□ -2.06
COPS3-209ENST00000486810 TRRAPQ9Y4A5 3859 aa2.2□□□□□ -2.06
COPS3-209ENST00000486810 MTORP42345 2549 aa2.2□□□□□ -2.06
COPS3-209ENST00000486810 ZFYVE26Q68DK2 2539 aa2.19□□□□□ -2.06
COPS3-209ENST00000486810 NBEAL1Q6ZS30 2694 aa2.19□□□□□ -2.06
COPS3-209ENST00000486810 LYSTQ99698 3801 aa2.18□□□□□ -2.06
COPS3-209ENST00000486810 MXRA5Q9NR99 2828 aa2.18□□□□□ -2.06
COPS3-209ENST00000486810 NBEAL2Q6ZNJ1 2754 aa2.17□□□□□ -2.06
COPS3-209ENST00000486810 ZNF292O60281 2723 aa2.17□□□□□ -2.06
COPS3-209ENST00000486810 ACANP16112 2415 aa2.17□□□□□ -2.06
COPS3-209ENST00000486810 CSMD3Q7Z407 3707 aa2.16□□□□□ -2.06
COPS3-209ENST00000486810 BDP1A6H8Y1 2624 aa2.16□□□□□ -2.06
COPS3-209ENST00000486810 MYO15AQ9UKN7 3530 aa2.16□□□□□ -2.06
COPS3-209ENST00000486810 USP24Q9UPU5 2620 aa2.15□□□□□ -2.06
COPS3-209ENST00000486810 TNP1P09430 55 aa2.15□□□□□ -2.07
COPS3-209ENST00000486810 DNAH2Q9P225 4427 aa2.15□□□□□ -2.07
COPS3-209ENST00000486810 PIEZO1Q92508 2521 aa2.15□□□□□ -2.07
COPS3-209ENST00000486810 EPG5Q9HCE0 2579 aa2.14□□□□□ -2.07
COPS3-209ENST00000486810 DNAH10Q8IVF4 4471 aa2.14□□□□□ -2.07
COPS3-209ENST00000486810 ANK3Q12955 4377 aaKnown RBP2.14□□□□□ -2.07
COPS3-209ENST00000486810 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
COPS3-209ENST00000486810 UNC79Q9P2D8 2635 aa2.14□□□□□ -2.07
COPS3-209ENST00000486810 MYO9AB2RTY4 2548 aa2.14□□□□□ -2.07
COPS3-209ENST00000486810 GCN1Q92616 2671 aaKnown RBP2.14□□□□□ -2.07
COPS3-209ENST00000486810 DYNC2H1Q8NCM8 4307 aaKnown RBP2.13□□□□□ -2.07
COPS3-209ENST00000486810 SMR3AQ99954 134 aa2.13□□□□□ -2.07
COPS3-209ENST00000486810 ITPR2Q14571 2701 aa2.13□□□□□ -2.07
COPS3-209ENST00000486810 DNAH17Q9UFH2 4485 aa2.13□□□□□ -2.07
COPS3-209ENST00000486810 DNAH3Q8TD57 4116 aa2.13□□□□□ -2.07
COPS3-209ENST00000486810 PKD1L1Q8TDX9 2849 aa2.12□□□□□ -2.07
COPS3-209ENST00000486810 DNAH6Q9C0G6 4158 aa2.12□□□□□ -2.07
COPS3-209ENST00000486810 ANK2Q01484 3957 aa2.11□□□□□ -2.07
COPS3-209ENST00000486810 DNAH9Q9NYC9 4486 aa2.11□□□□□ -2.07
COPS3-209ENST00000486810 SACSQ9NZJ4 4579 aa2.1□□□□□ -2.07
COPS3-209ENST00000486810 FBN3Q75N90 2809 aa2.1□□□□□ -2.07
COPS3-209ENST00000486810 CMYA5Q8N3K9 4069 aa2.1□□□□□ -2.07
COPS3-209ENST00000486810 CACNA1AO00555 2505 aa2.1□□□□□ -2.07
COPS3-209ENST00000486810 EYSQ5T1H1 3165 aa2.1□□□□□ -2.07
COPS3-209ENST00000486810 ZANQ9Y493 2812 aa2.1□□□□□ -2.07
COPS3-209ENST00000486810 POLQO75417 2590 aa2.09□□□□□ -2.07
COPS3-209ENST00000486810 HUWE1Q7Z6Z7 4374 aaKnown RBP2.09□□□□□ -2.08
COPS3-209ENST00000486810 HIVEP1P15822 2718 aa2.08□□□□□ -2.08
COPS3-209ENST00000486810 FLNCQ14315 2725 aa2.08□□□□□ -2.08
COPS3-209ENST00000486810 C9orf92A6NGG3 77 aa2.07□□□□□ -2.08
COPS3-209ENST00000486810 CSMD2Q7Z408 3487 aa2.07□□□□□ -2.08
COPS3-209ENST00000486810 VPS13CQ709C8 3753 aa2.06□□□□□ -2.08
COPS3-209ENST00000486810 CEP295Q9C0D2 2601 aa2.05□□□□□ -2.08
COPS3-209ENST00000486810 ATRQ13535 2644 aa2.05□□□□□ -2.08
COPS3-209ENST00000486810 PKD1P98161 4303 aa2.05□□□□□ -2.08
COPS3-209ENST00000486810 PRKDCP78527 4128 aaKnown RBP2.04□□□□□ -2.08
COPS3-209ENST00000486810 TEP1Q99973 2627 aaKnown RBP2.04□□□□□ -2.08
COPS3-209ENST00000486810 CUBNO60494 3623 aa2.03□□□□□ -2.08
COPS3-209ENST00000486810 FASNP49327 2511 aaKnown RBP2.03□□□□□ -2.08
COPS3-209ENST00000486810 SVEP1Q4LDE5 3571 aa2.03□□□□□ -2.08
COPS3-209ENST00000486810 STAB2Q8WWQ8 2551 aa2.03□□□□□ -2.09
COPS3-209ENST00000486810 FBN2P35556 2912 aa2.02□□□□□ -2.09
COPS3-209ENST00000486810 DNAH7Q8WXX0 4024 aa2.02□□□□□ -2.09
COPS3-209ENST00000486810 ANKRD11Q6UB99 2663 aaPredicted RBP2.01□□□□□ -2.09
COPS3-209ENST00000486810 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
COPS3-209ENST00000486810 KRTAP6-3Q3LI67 103 aa2.01□□□□□ -2.09
COPS3-209ENST00000486810 HECTD4Q9Y4D8 3996 aa2.01□□□□□ -2.09
COPS3-209ENST00000486810 KMT2AQ03164 3969 aa2□□□□□ -2.09
COPS3-209ENST00000486810 KRTAP12-4P60329 112 aa2□□□□□ -2.09
COPS3-209ENST00000486810 NOTCH1P46531 2555 aa2□□□□□ -2.09
COPS3-209ENST00000486810 FLGP20930 4061 aaPredicted RBP1.99□□□□□ -2.09
COPS3-209ENST00000486810 APOBP04114 4563 aaKnown RBP1.99□□□□□ -2.09
COPS3-209ENST00000486810 MYO18BQ8IUG5 2567 aa1.99□□□□□ -2.09
COPS3-209ENST00000486810 VPS13BQ7Z7G8 4022 aa1.98□□□□□ -2.09
COPS3-209ENST00000486810 PKHD1L1Q86WI1 4243 aa1.96□□□□□ -2.1
COPS3-209ENST00000486810 FAT3Q8TDW7 4589 aa1.95□□□□□ -2.1
COPS3-209ENST00000486810 KRTAP2-3P0C7H8 128 aa1.95□□□□□ -2.1
COPS3-209ENST00000486810 KRTAP8-1Q8IUC2 63 aa1.95□□□□□ -2.1
COPS3-209ENST00000486810 KRTAP2-4Q9BYR9 128 aa1.95□□□□□ -2.1
COPS3-209ENST00000486810 KRTAP2-1Q9BYU5 128 aa1.95□□□□□ -2.1
COPS3-209ENST00000486810 HSPG2P98160 4391 aa1.95□□□□□ -2.1
COPS3-209ENST00000486810 TENM3Q9P273 2699 aa1.94□□□□□ -2.1
COPS3-209ENST00000486810 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
COPS3-209ENST00000486810 ZNF469Q96JG9 3925 aaPredicted RBP1.92□□□□□ -2.1
COPS3-209ENST00000486810 ACACBO00763 2458 aa1.92□□□□□ -2.1
COPS3-209ENST00000486810 STAB1Q9NY15 2570 aa1.91□□□□□ -2.1
COPS3-209ENST00000486810 NSD1Q96L73 2696 aaPredicted RBP1.89□□□□□ -2.11
COPS3-209ENST00000486810 DNAH5Q8TE73 4624 aa1.88□□□□□ -2.11
COPS3-209ENST00000486810 FLNAP21333 2647 aaKnown RBP1.87□□□□□ -2.11
COPS3-209ENST00000486810 IGSF10Q6WRI0 2623 aa1.87□□□□□ -2.11
COPS3-209ENST00000486810 LRP1Q07954 4544 aaKnown RBP1.87□□□□□ -2.11
COPS3-209ENST00000486810 FAT2Q9NYQ8 4349 aa1.87□□□□□ -2.11
COPS3-209ENST00000486810 HMCN1Q96RW7 5635 aa1.87□□□□□ -2.11
COPS3-209ENST00000486810 M0R2T5 61 aa1.85□□□□□ -2.11
COPS3-209ENST00000486810 KRTAP10-4P60372 401 aaPredicted RBP1.84□□□□□ -2.11
COPS3-209ENST00000486810 TENM1Q9UKZ4 2725 aa1.83□□□□□ -2.12
COPS3-209ENST00000486810 DYNC1H1Q14204 4646 aaKnown RBP1.81□□□□□ -2.12
COPS3-209ENST00000486810 PLECQ15149 4684 aaKnown RBP1.81□□□□□ -2.12
COPS3-209ENST00000486810 MGAM2Q2M2H8 2515 aa1.81□□□□□ -2.12
COPS3-209ENST00000486810 TNXBP22105 4242 aa1.8□□□□□ -2.12
COPS3-209ENST00000486810 FLNBO75369 2602 aaKnown RBP1.8□□□□□ -2.12
COPS3-209ENST00000486810 MAST4O15021 2626 aa1.78□□□□□ -2.12
COPS3-209ENST00000486810 SMR3BP02814 79 aaPredicted RBP1.76□□□□□ -2.13
COPS3-209ENST00000486810 STARD9Q9P2P6 4700 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms