RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 KRTAP10-6P60371 365 aaPredicted RBP6.36□□□□□ -1.39
PKD1-219ENST00000486339 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
PKD1-219ENST00000486339 STARD9Q9P2P6 4700 aa6.36□□□□□ -1.39
PKD1-219ENST00000486339 DYNC1H1Q14204 4646 aaKnown RBP6.33□□□□□ -1.4
PKD1-219ENST00000486339 FAT1Q14517 4588 aa6.31□□□□□ -1.4
PKD1-219ENST00000486339 DNAH10Q8IVF4 4471 aa6.31□□□□□ -1.4
PKD1-219ENST00000486339 DNAH17Q9UFH2 4485 aa6.3□□□□□ -1.4
PKD1-219ENST00000486339 KRTAP13-4Q3LI77 160 aa6.3□□□□□ -1.4
PKD1-219ENST00000486339 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.41
PKD1-219ENST00000486339 LRP1BQ9NZR2 4599 aa6.27□□□□□ -1.41
PKD1-219ENST00000486339 ANK2Q01484 3957 aa6.24□□□□□ -1.41
PKD1-219ENST00000486339 RYR1P21817 5038 aa6.24□□□□□ -1.41
PKD1-219ENST00000486339 KRTAP3-2Q9BYR7 98 aa6.2□□□□□ -1.42
PKD1-219ENST00000486339 KIAA1109Q2LD37 5005 aa6.17□□□□□ -1.42
PKD1-219ENST00000486339 DNAH2Q9P225 4427 aa6.16□□□□□ -1.42
PKD1-219ENST00000486339 DYNC2H1Q8NCM8 4307 aaKnown RBP6.09□□□□□ -1.43
PKD1-219ENST00000486339 FAT2Q9NYQ8 4349 aa6.07□□□□□ -1.44
PKD1-219ENST00000486339 KMT2AQ03164 3969 aa6.07□□□□□ -1.44
PKD1-219ENST00000486339 RYR3Q15413 4870 aa6.06□□□□□ -1.44
PKD1-219ENST00000486339 SACSQ9NZJ4 4579 aa6.06□□□□□ -1.44
PKD1-219ENST00000486339 DNAH3Q8TD57 4116 aa6.01□□□□□ -1.45
PKD1-219ENST00000486339 DNAH8Q96JB1 4490 aa6.01□□□□□ -1.45
PKD1-219ENST00000486339 KRTAP4-1Q9BYQ7 146 aa6□□□□□ -1.45
PKD1-219ENST00000486339 LYSTQ99698 3801 aa5.97□□□□□ -1.45
PKD1-219ENST00000486339 CMYA5Q8N3K9 4069 aa5.95□□□□□ -1.46
PKD1-219ENST00000486339 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
PKD1-219ENST00000486339 LORP23490 312 aaPredicted RBP5.93□□□□□ -1.46
PKD1-219ENST00000486339 MYCBP2O75592 4640 aa5.91□□□□□ -1.46
PKD1-219ENST00000486339 VPS13BQ7Z7G8 4022 aa5.9□□□□□ -1.46
PKD1-219ENST00000486339 APOBP04114 4563 aaKnown RBP5.89□□□□□ -1.47
PKD1-219ENST00000486339 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
PKD1-219ENST00000486339 RYR2Q92736 4967 aa5.86□□□□□ -1.47
PKD1-219ENST00000486339 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
PKD1-219ENST00000486339 LRP1Q07954 4544 aaKnown RBP5.82□□□□□ -1.48
PKD1-219ENST00000486339 MT1HP80294 61 aa5.81□□□□□ -1.48
PKD1-219ENST00000486339 DNAH7Q8WXX0 4024 aa5.8□□□□□ -1.48
PKD1-219ENST00000486339 HERC2O95714 4834 aa5.79□□□□□ -1.48
PKD1-219ENST00000486339 FAT3Q8TDW7 4589 aa5.76□□□□□ -1.49
PKD1-219ENST00000486339 DNAH6Q9C0G6 4158 aa5.75□□□□□ -1.49
PKD1-219ENST00000486339 HYDINQ4G0P3 5121 aa5.72□□□□□ -1.49
PKD1-219ENST00000486339 MT2AP02795 61 aa5.7□□□□□ -1.5
PKD1-219ENST00000486339 BIRC6Q9NR09 4857 aa5.69□□□□□ -1.5
PKD1-219ENST00000486339 FRAS1Q86XX4 4008 aa5.69□□□□□ -1.5
PKD1-219ENST00000486339 HECTD4Q9Y4D8 3996 aa5.65□□□□□ -1.51
PKD1-219ENST00000486339 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
PKD1-219ENST00000486339 PKHD1P08F94 4074 aa5.63□□□□□ -1.51
PKD1-219ENST00000486339 KMT2CQ8NEZ4 4911 aaKnown RBP5.62□□□□□ -1.51
PKD1-219ENST00000486339 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
PKD1-219ENST00000486339 SPRR2GQ9BYE4 73 aa5.6□□□□□ -1.51
PKD1-219ENST00000486339 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
PKD1-219ENST00000486339 MT1FP04733 61 aa5.6□□□□□ -1.51
PKD1-219ENST00000486339 HSPG2P98160 4391 aa5.58□□□□□ -1.52
PKD1-219ENST00000486339 LRP2P98164 4655 aa5.57□□□□□ -1.52
PKD1-219ENST00000486339 KRTAP8-1Q8IUC2 63 aa5.47□□□□□ -1.53
PKD1-219ENST00000486339 PCLOQ9Y6V0 5065 aa5.47□□□□□ -1.53
PKD1-219ENST00000486339 CRCT1Q9UGL9 99 aa5.45□□□□□ -1.54
PKD1-219ENST00000486339 INE1O15225 51 aa5.45□□□□□ -1.54
PKD1-219ENST00000486339 HERC1Q15751 4861 aa5.43□□□□□ -1.54
PKD1-219ENST00000486339 PKD1P98161 4303 aa5.42□□□□□ -1.54
PKD1-219ENST00000486339 EPPK1P58107 5090 aaKnown RBP5.36□□□□□ -1.55
PKD1-219ENST00000486339 KRTAP19-1Q8IUB9 90 aa5.36□□□□□ -1.55
PKD1-219ENST00000486339 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
PKD1-219ENST00000486339 ABCA13Q86UQ4 5058 aa5.3□□□□□ -1.56
PKD1-219ENST00000486339 KRTAP19-8Q3LI54 63 aa5.3□□□□□ -1.56
PKD1-219ENST00000486339 KRTAP9-8Q9BYQ0 159 aa5.26□□□□□ -1.57
PKD1-219ENST00000486339 LPAP08519 4548 aa5.24□□□□□ -1.57
PKD1-219ENST00000486339 PKHD1L1Q86WI1 4243 aa5.2□□□□□ -1.58
PKD1-219ENST00000486339 KRTAP19-2Q3LHN2 52 aa5.16□□□□□ -1.58
PKD1-219ENST00000486339 SPRR2FQ96RM1 72 aa5.16□□□□□ -1.58
PKD1-219ENST00000486339 MT1BP07438 61 aa5.15□□□□□ -1.58
PKD1-219ENST00000486339 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.58
PKD1-219ENST00000486339 TNXBP22105 4242 aa5.13□□□□□ -1.59
PKD1-219ENST00000486339 KRTAP9-3Q9BYQ3 159 aa5.12□□□□□ -1.59
PKD1-219ENST00000486339 KRTAP10-7P60409 375 aaPredicted RBP5.11□□□□□ -1.59
PKD1-219ENST00000486339 MT1XP80297 61 aa5.11□□□□□ -1.59
PKD1-219ENST00000486339 KRTAP10-5P60370 271 aa5.1□□□□□ -1.59
PKD1-219ENST00000486339 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
PKD1-219ENST00000486339 UBR4Q5T4S7 5183 aa5.02□□□□□ -1.61
PKD1-219ENST00000486339 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
PKD1-219ENST00000486339 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.61
PKD1-219ENST00000486339 RNF213Q63HN8 5207 aa4.96□□□□□ -1.62
PKD1-219ENST00000486339 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
PKD1-219ENST00000486339 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
PKD1-219ENST00000486339 LCE2BO14633 110 aa4.93□□□□□ -1.62
PKD1-219ENST00000486339 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
PKD1-219ENST00000486339 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
PKD1-219ENST00000486339 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
PKD1-219ENST00000486339 HMCN2Q8NDA2 5059 aa4.86□□□□□ -1.63
PKD1-219ENST00000486339 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
PKD1-219ENST00000486339 SPRR2EP22531 72 aa4.81□□□□□ -1.64
PKD1-219ENST00000486339 SPRR2BP35325 72 aa4.81□□□□□ -1.64
PKD1-219ENST00000486339 SPRR2AP35326 72 aa4.81□□□□□ -1.64
PKD1-219ENST00000486339 LCE2AQ5TA79 106 aaPredicted RBP4.81□□□□□ -1.64
PKD1-219ENST00000486339 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
PKD1-219ENST00000486339 MT1GP13640 62 aa4.72□□□□□ -1.65
PKD1-219ENST00000486339 MUC2Q02817 5179 aa4.69□□□□□ -1.66
PKD1-219ENST00000486339 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
PKD1-219ENST00000486339 KRTAP9-2Q9BYQ4 174 aa4.66□□□□□ -1.66
PKD1-219ENST00000486339 SPRR2DP22532 72 aa4.65□□□□□ -1.66
PKD1-219ENST00000486339 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms