RNA–Protein interactions for RNA: ENST00000485506.1

NECTIN3-207, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 2

Gene NECTIN3, Length 314 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-207ENST00000485506 USP9YO00507 2555 aaPredicted RBP-0.8□□□□□ -2.54
NECTIN3-207ENST00000485506 UGGT1Q9NYU2 1555 aa-0.81□□□□□ -2.54
NECTIN3-207ENST00000485506 M0QZ58 72 aa-0.81□□□□□ -2.54
NECTIN3-207ENST00000485506 KRTAP8-1Q8IUC2 63 aa-0.81□□□□□ -2.54
NECTIN3-207ENST00000485506 HYDINQ4G0P3 5121 aa-0.81□□□□□ -2.54
NECTIN3-207ENST00000485506 SMIM27A0A1W2PRY6 76 aa-0.82□□□□□ -2.54
NECTIN3-207ENST00000485506 CCDC168Q8NDH2 2452 aa-0.82□□□□□ -2.54
NECTIN3-207ENST00000485506 KAAG1Q9UBP8 84 aa-0.83□□□□□ -2.54
NECTIN3-207ENST00000485506 RELNP78509 3460 aa-0.84□□□□□ -2.54
NECTIN3-207ENST00000485506 RIF1Q5UIP0 2472 aaKnown RBP-0.84□□□□□ -2.54
NECTIN3-207ENST00000485506 PLECQ15149 4684 aaKnown RBP-0.85□□□□□ -2.54
NECTIN3-207ENST00000485506 PRXQ9BXM0 1461 aa-0.85□□□□□ -2.55
NECTIN3-207ENST00000485506 EPPK1P58107 5090 aaKnown RBP-0.85□□□□□ -2.55
NECTIN3-207ENST00000485506 SMR3BP02814 79 aaPredicted RBP-0.86□□□□□ -2.55
NECTIN3-207ENST00000485506 SPTBN5Q9NRC6 3674 aaKnown RBP-0.86□□□□□ -2.55
NECTIN3-207ENST00000485506 ERICH3Q5RHP9 1530 aa-0.87□□□□□ -2.55
NECTIN3-207ENST00000485506 EFCAB6Q5THR3 1501 aa-0.87□□□□□ -2.55
NECTIN3-207ENST00000485506 LAMA2P24043 3122 aaKnown RBP-0.88□□□□□ -2.55
NECTIN3-207ENST00000485506 A0A0C4DFX4 3053 aa-0.88□□□□□ -2.55
NECTIN3-207ENST00000485506 A0A1B0GUL6 1792 aa-0.9□□□□□ -2.55
NECTIN3-207ENST00000485506 WFDC10BQ8IUB3 73 aa-0.9□□□□□ -2.55
NECTIN3-207ENST00000485506 KIF21BO75037 1637 aa-0.9□□□□□ -2.55
NECTIN3-207ENST00000485506 DNAH7Q8WXX0 4024 aa-0.9□□□□□ -2.55
NECTIN3-207ENST00000485506 CMYA5Q8N3K9 4069 aa-0.9□□□□□ -2.55
NECTIN3-207ENST00000485506 TLN2Q9Y4G6 2542 aa-0.91□□□□□ -2.55
NECTIN3-207ENST00000485506 FAM208AQ9UK61 1670 aaKnown RBP-0.91□□□□□ -2.56
NECTIN3-207ENST00000485506 BIRC6Q9NR09 4857 aa-0.92□□□□□ -2.56
NECTIN3-207ENST00000485506 PLNP26678 52 aa-0.92□□□□□ -2.56
NECTIN3-207ENST00000485506 COL12A1Q99715 3063 aa-0.92□□□□□ -2.56
NECTIN3-207ENST00000485506 PREX2Q70Z35 1606 aa-0.93□□□□□ -2.56
NECTIN3-207ENST00000485506 FRYQ5TBA9 3013 aa-0.93□□□□□ -2.56
NECTIN3-207ENST00000485506 AGLP35573 1532 aa-0.93□□□□□ -2.56
NECTIN3-207ENST00000485506 RYR2Q92736 4967 aa-0.94□□□□□ -2.56
NECTIN3-207ENST00000485506 NIPBLQ6KC79 2804 aaeCLIP-0.94□□□□□ -2.56
NECTIN3-207ENST00000485506 USP9XQ93008 2570 aaPredicted RBP-0.95□□□□□ -2.56
NECTIN3-207ENST00000485506 CELSR3Q9NYQ7 3312 aa-0.95□□□□□ -2.56
NECTIN3-207ENST00000485506 ADCY10Q96PN6 1610 aa-0.96□□□□□ -2.56
NECTIN3-207ENST00000485506 DNHD1Q96M86 4753 aa-0.96□□□□□ -2.56
NECTIN3-207ENST00000485506 ITPR1Q14643 2758 aa-0.97□□□□□ -2.56
NECTIN3-207ENST00000485506 LAMA3Q16787 3333 aa-0.97□□□□□ -2.57
NECTIN3-207ENST00000485506 DEFB131AP59861 70 aa-0.98□□□□□ -2.57
NECTIN3-207ENST00000485506 LMO7Q8WWI1 1683 aa-0.98□□□□□ -2.57
NECTIN3-207ENST00000485506 SYCP2Q9BX26 1530 aa-0.99□□□□□ -2.57
NECTIN3-207ENST00000485506 ABCA5Q8WWZ7 1642 aa-0.99□□□□□ -2.57
NECTIN3-207ENST00000485506 LINC01546A6NGU7 62 aa-1□□□□□ -2.57
NECTIN3-207ENST00000485506 DYNC1H1Q14204 4646 aaKnown RBP-1□□□□□ -2.57
NECTIN3-207ENST00000485506 C5orf42Q9H799 3197 aa-1.02□□□□□ -2.57
NECTIN3-207ENST00000485506 MT1EP04732 61 aa-1.02□□□□□ -2.57
NECTIN3-207ENST00000485506 SPART-AS1P0CW21 52 aa-1.02□□□□□ -2.57
NECTIN3-207ENST00000485506 CMC2Q9NRP2 79 aa-1.02□□□□□ -2.57
NECTIN3-207ENST00000485506 DNAH17Q9UFH2 4485 aa-1.02□□□□□ -2.57
NECTIN3-207ENST00000485506 DNAH10Q8IVF4 4471 aa-1.03□□□□□ -2.57
NECTIN3-207ENST00000485506 MT1XP80297 61 aa-1.03□□□□□ -2.57
NECTIN3-207ENST00000485506 TEX15Q9BXT5 2789 aa-1.03□□□□□ -2.57
NECTIN3-207ENST00000485506 COL6A5A8TX70 2615 aa-1.03□□□□□ -2.58
NECTIN3-207ENST00000485506 ABCC8Q09428 1581 aa-1.04□□□□□ -2.58
NECTIN3-207ENST00000485506 RNF213Q63HN8 5207 aa-1.06□□□□□ -2.58
NECTIN3-207ENST00000485506 TFF3Q07654 80 aa-1.07□□□□□ -2.58
NECTIN3-207ENST00000485506 SMIM2Q9BVW6 85 aa-1.07□□□□□ -2.58
NECTIN3-207ENST00000485506 FANCD2Q9BXW9 1451 aa-1.09□□□□□ -2.58
NECTIN3-207ENST00000485506 MT1LQ93083 61 aa-1.09□□□□□ -2.58
NECTIN3-207ENST00000485506 NRXN3Q9Y4C0 1643 aa-1.09□□□□□ -2.58
NECTIN3-207ENST00000485506 MROH2AA6NES4 1674 aa-1.1□□□□□ -2.59
NECTIN3-207ENST00000485506 SRCAPQ6ZRS2 3230 aa-1.13□□□□□ -2.59
NECTIN3-207ENST00000485506 POLR2KP53803 58 aaKnown RBP-1.13□□□□□ -2.59
NECTIN3-207ENST00000485506 CHD7Q9P2D1 2997 aa-1.13□□□□□ -2.59
NECTIN3-207ENST00000485506 ADGRG4Q8IZF6 3080 aa-1.14□□□□□ -2.59
NECTIN3-207ENST00000485506 SPTAN1Q13813 2472 aaKnown RBP-1.14□□□□□ -2.59
NECTIN3-207ENST00000485506 CSMD1Q96PZ7 3565 aa-1.14□□□□□ -2.59
NECTIN3-207ENST00000485506 TRPM2O94759 1503 aa-1.15□□□□□ -2.59
NECTIN3-207ENST00000485506 MGAQ8IWI9 3026 aa-1.15□□□□□ -2.59
NECTIN3-207ENST00000485506 LRBAP50851 2863 aa-1.16□□□□□ -2.59
NECTIN3-207ENST00000485506 IQGAP1P46940 1657 aa-1.17□□□□□ -2.6
NECTIN3-207ENST00000485506 TRRAPQ9Y4A5 3859 aa-1.19□□□□□ -2.6
NECTIN3-207ENST00000485506 DDX60Q8IY21 1712 aaKnown RBP-1.2□□□□□ -2.6
NECTIN3-207ENST00000485506 CEP295Q9C0D2 2601 aa-1.22□□□□□ -2.6
NECTIN3-207ENST00000485506 ABCA13Q86UQ4 5058 aa-1.22□□□□□ -2.6
NECTIN3-207ENST00000485506 DNAH5Q8TE73 4624 aa-1.22□□□□□ -2.6
NECTIN3-207ENST00000485506 MYO9AB2RTY4 2548 aa-1.23□□□□□ -2.61
NECTIN3-207ENST00000485506 SNRPGP15A8MWD9 76 aa-1.23□□□□□ -2.61
NECTIN3-207ENST00000485506 NFAT5O94916 1531 aa-1.24□□□□□ -2.61
NECTIN3-207ENST00000485506 CLTCL1P53675 1640 aa-1.25□□□□□ -2.61
NECTIN3-207ENST00000485506 MT1HL1P0DM35 61 aa-1.25□□□□□ -2.61
NECTIN3-207ENST00000485506 ITPR2Q14571 2701 aa-1.25□□□□□ -2.61
NECTIN3-207ENST00000485506 CFAP46Q8IYW2 2715 aa-1.25□□□□□ -2.61
NECTIN3-207ENST00000485506 NDUFA1O15239 70 aa-1.26□□□□□ -2.61
NECTIN3-207ENST00000485506 LEAP2Q969E1 77 aa-1.26□□□□□ -2.61
NECTIN3-207ENST00000485506 ZFHX4Q86UP3 3567 aa-1.27□□□□□ -2.61
NECTIN3-207ENST00000485506 EYSQ5T1H1 3165 aa-1.29□□□□□ -2.62
NECTIN3-207ENST00000485506 DEFB136Q30KP8 78 aa-1.34□□□□□ -2.62
NECTIN3-207ENST00000485506 MT1GP13640 62 aa-1.36□□□□□ -2.63
NECTIN3-207ENST00000485506 CSMD2Q7Z408 3487 aa-1.36□□□□□ -2.63
NECTIN3-207ENST00000485506 SMG1Q96Q15 3661 aaKnown RBP-1.36□□□□□ -2.63
NECTIN3-207ENST00000485506 MT1MQ8N339 61 aa-1.38□□□□□ -2.63
NECTIN3-207ENST00000485506 MT2AP02795 61 aa-1.39□□□□□ -2.63
NECTIN3-207ENST00000485506 CRYBG3Q68DQ2 2970 aa-1.39□□□□□ -2.63
NECTIN3-207ENST00000485506 DMXL2Q8TDJ6 3036 aa-1.41□□□□□ -2.63
NECTIN3-207ENST00000485506 TLN1Q9Y490 2541 aaKnown RBP-1.41□□□□□ -2.63
NECTIN3-207ENST00000485506 DEFB4AO15263 64 aa-1.41□□□□□ -2.64
NECTIN3-207ENST00000485506 KRTAP20-1Q3LI63 56 aa-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms