RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 PLECQ15149 4684 aaKnown RBP4.29□□□□□ -1.72
CAST-210ENST00000484552 MMP24-AS1A0A0U1RRL7 71 aa4.28□□□□□ -1.72
CAST-210ENST00000484552 KRTAP10-8P60410 259 aa4.28□□□□□ -1.72
CAST-210ENST00000484552 LINC01556Q5JQF7 62 aa4.28□□□□□ -1.72
CAST-210ENST00000484552 UNQ6190/PRO20217Q6UXQ8 127 aa4.27□□□□□ -1.73
CAST-210ENST00000484552 Q6ZSA8 131 aa4.27□□□□□ -1.73
CAST-210ENST00000484552 FRAS1Q86XX4 4008 aa4.24□□□□□ -1.73
CAST-210ENST00000484552 IGKV2-30P06310 120 aa4.24□□□□□ -1.73
CAST-210ENST00000484552 KMT2AQ03164 3969 aa4.23□□□□□ -1.73
CAST-210ENST00000484552 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
CAST-210ENST00000484552 KRTAP7-1Q8IUC3 87 aa4.21□□□□□ -1.74
CAST-210ENST00000484552 HECTD4Q9Y4D8 3996 aa4.2□□□□□ -1.74
CAST-210ENST00000484552 UBE2DNLQ8IWF7 75 aa4.19□□□□□ -1.74
CAST-210ENST00000484552 VPS13DQ5THJ4 4388 aa4.18□□□□□ -1.74
CAST-210ENST00000484552 H1FX-AS1Q4G0G2 97 aa4.18□□□□□ -1.74
CAST-210ENST00000484552 PCLOQ9Y6V0 5065 aa4.18□□□□□ -1.74
CAST-210ENST00000484552 APLNQ9ULZ1 77 aa4.17□□□□□ -1.74
CAST-210ENST00000484552 HERC2O95714 4834 aa4.17□□□□□ -1.74
CAST-210ENST00000484552 DNAH10Q8IVF4 4471 aa4.17□□□□□ -1.74
CAST-210ENST00000484552 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
CAST-210ENST00000484552 DNAH6Q9C0G6 4158 aa4.16□□□□□ -1.74
CAST-210ENST00000484552 KRTAP10-2P60368 255 aa4.16□□□□□ -1.74
CAST-210ENST00000484552 RPL37P61927 97 aaKnown RBP4.15□□□□□ -1.74
CAST-210ENST00000484552 PP632Q6XCG6 107 aa4.15□□□□□ -1.74
CAST-210ENST00000484552 FLG2Q5D862 2391 aaPredicted RBP4.15□□□□□ -1.75
CAST-210ENST00000484552 FAT2Q9NYQ8 4349 aa4.14□□□□□ -1.75
CAST-210ENST00000484552 PKHD1P08F94 4074 aa4.14□□□□□ -1.75
CAST-210ENST00000484552 KIAA1109Q2LD37 5005 aa4.13□□□□□ -1.75
CAST-210ENST00000484552 DNAH2Q9P225 4427 aa4.13□□□□□ -1.75
CAST-210ENST00000484552 KRTAP1-5Q9BYS1 174 aa4.13□□□□□ -1.75
CAST-210ENST00000484552 KRTAP13-3Q3SY46 172 aa4.12□□□□□ -1.75
CAST-210ENST00000484552 IGKV2D-30A0A075B6S6 120 aa4.1□□□□□ -1.75
CAST-210ENST00000484552 DEFB105AQ8NG35 78 aa4.1□□□□□ -1.75
CAST-210ENST00000484552 RYR1P21817 5038 aa4.08□□□□□ -1.76
CAST-210ENST00000484552 SPRR1AP35321 89 aa4.07□□□□□ -1.76
CAST-210ENST00000484552 DNAH17Q9UFH2 4485 aa4.07□□□□□ -1.76
CAST-210ENST00000484552 PKD1P98161 4303 aa4.07□□□□□ -1.76
CAST-210ENST00000484552 DYNC1H1Q14204 4646 aaKnown RBP4.07□□□□□ -1.76
CAST-210ENST00000484552 DNAH11Q96DT5 4516 aa4.06□□□□□ -1.76
CAST-210ENST00000484552 A0A096LNI7 61 aa4.05□□□□□ -1.76
CAST-210ENST00000484552 A0A1B0GVY2 172 aa4.05□□□□□ -1.76
CAST-210ENST00000484552 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
CAST-210ENST00000484552 KRTAP13-2Q52LG2 175 aa4.02□□□□□ -1.77
CAST-210ENST00000484552 HSPG2P98160 4391 aa4.02□□□□□ -1.77
CAST-210ENST00000484552 LRP1BQ9NZR2 4599 aa4□□□□□ -1.77
CAST-210ENST00000484552 APOBP04114 4563 aaKnown RBP3.97□□□□□ -1.77
CAST-210ENST00000484552 PRLHP81277 87 aa3.96□□□□□ -1.78
CAST-210ENST00000484552 DNAH5Q8TE73 4624 aa3.96□□□□□ -1.78
CAST-210ENST00000484552 SPRR1BP22528 89 aa3.94□□□□□ -1.78
CAST-210ENST00000484552 KRTAP13-1Q8IUC0 172 aa3.93□□□□□ -1.78
CAST-210ENST00000484552 HERC1Q15751 4861 aa3.91□□□□□ -1.78
CAST-210ENST00000484552 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
CAST-210ENST00000484552 FAT1Q14517 4588 aa3.89□□□□□ -1.79
CAST-210ENST00000484552 MYCBP2O75592 4640 aa3.87□□□□□ -1.79
CAST-210ENST00000484552 VPS13BQ7Z7G8 4022 aa3.85□□□□□ -1.79
CAST-210ENST00000484552 DNAH8Q96JB1 4490 aa3.84□□□□□ -1.8
CAST-210ENST00000484552 SRRM2Q9UQ35 2752 aaKnown RBP3.84□□□□□ -1.8
CAST-210ENST00000484552 KRTAP10-1P60331 282 aa3.83□□□□□ -1.8
CAST-210ENST00000484552 S4R3F8 94 aa3.83□□□□□ -1.8
CAST-210ENST00000484552 SPINK1P00995 79 aa3.81□□□□□ -1.8
CAST-210ENST00000484552 DMBT1Q9UGM3 2413 aaPredicted RBP3.81□□□□□ -1.8
CAST-210ENST00000484552 Q5VSD8 79 aa3.81□□□□□ -1.8
CAST-210ENST00000484552 SMR3BP02814 79 aaPredicted RBP3.76□□□□□ -1.81
CAST-210ENST00000484552 HMCN2Q8NDA2 5059 aa3.75□□□□□ -1.81
CAST-210ENST00000484552 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
CAST-210ENST00000484552 KRTAP13-4Q3LI77 160 aa3.73□□□□□ -1.81
CAST-210ENST00000484552 UBR4Q5T4S7 5183 aa3.72□□□□□ -1.81
CAST-210ENST00000484552 LRP1Q07954 4544 aaKnown RBP3.72□□□□□ -1.81
CAST-210ENST00000484552 KRTAP1-4P0C5Y4 121 aa3.71□□□□□ -1.81
CAST-210ENST00000484552 FAT3Q8TDW7 4589 aa3.71□□□□□ -1.82
CAST-210ENST00000484552 KRTAP10-4P60372 401 aaPredicted RBP3.71□□□□□ -1.82
CAST-210ENST00000484552 SPINK6Q6UWN8 80 aa3.71□□□□□ -1.82
CAST-210ENST00000484552 PKHD1L1Q86WI1 4243 aa3.69□□□□□ -1.82
CAST-210ENST00000484552 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
CAST-210ENST00000484552 A0A0D9SG42 100 aa3.63□□□□□ -1.83
CAST-210ENST00000484552 RPS29P62273 56 aaKnown RBP3.63□□□□□ -1.83
CAST-210ENST00000484552 TNXBP22105 4242 aa3.62□□□□□ -1.83
CAST-210ENST00000484552 RNF213Q63HN8 5207 aa3.61□□□□□ -1.83
CAST-210ENST00000484552 MT1HL1P0DM35 61 aa3.61□□□□□ -1.83
CAST-210ENST00000484552 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
CAST-210ENST00000484552 LRP2P98164 4655 aa3.59□□□□□ -1.84
CAST-210ENST00000484552 KRTAP10-6P60371 365 aaPredicted RBP3.56□□□□□ -1.84
CAST-210ENST00000484552 C9orf92A6NGG3 77 aa3.47□□□□□ -1.85
CAST-210ENST00000484552 MUC2Q02817 5179 aa3.47□□□□□ -1.85
CAST-210ENST00000484552 LPAP08519 4548 aa3.46□□□□□ -1.86
CAST-210ENST00000484552 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
CAST-210ENST00000484552 M0QZ58 72 aa3.41□□□□□ -1.86
CAST-210ENST00000484552 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
CAST-210ENST00000484552 KRTAP10-10P60014 251 aa3.38□□□□□ -1.87
CAST-210ENST00000484552 MT3P25713 68 aa3.34□□□□□ -1.87
CAST-210ENST00000484552 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
CAST-210ENST00000484552 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
CAST-210ENST00000484552 MUC17Q685J3 4493 aa3.29□□□□□ -1.88
CAST-210ENST00000484552 LCE1AQ5T7P2 110 aa3.25□□□□□ -1.89
CAST-210ENST00000484552 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
CAST-210ENST00000484552 FSIP2Q5CZC0 6907 aa3.2□□□□□ -1.9
CAST-210ENST00000484552 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
CAST-210ENST00000484552 KRTAP4-1Q9BYQ7 146 aa3.16□□□□□ -1.9
CAST-210ENST00000484552 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
CAST-210ENST00000484552 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 294.5 ms