RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 CMYA5Q8N3K9 4069 aa4.15□□□□□ -1.74
COL12A1-207ENST00000483888 KRTAP21-3Q3LHN1 58 aa4.12□□□□□ -1.75
COL12A1-207ENST00000483888 ZNF469Q96JG9 3925 aaPredicted RBP4.11□□□□□ -1.75
COL12A1-207ENST00000483888 ANK3Q12955 4377 aaKnown RBP4.11□□□□□ -1.75
COL12A1-207ENST00000483888 LYSTQ99698 3801 aa4.1□□□□□ -1.75
COL12A1-207ENST00000483888 HUWE1Q7Z6Z7 4374 aaKnown RBP4.1□□□□□ -1.75
COL12A1-207ENST00000483888 DNAH3Q8TD57 4116 aa4.07□□□□□ -1.76
COL12A1-207ENST00000483888 ANK2Q01484 3957 aa4.05□□□□□ -1.76
COL12A1-207ENST00000483888 MT1HL1P0DM35 61 aa4.01□□□□□ -1.77
COL12A1-207ENST00000483888 HECTD4Q9Y4D8 3996 aa3.98□□□□□ -1.77
COL12A1-207ENST00000483888 DNAH8Q96JB1 4490 aa3.98□□□□□ -1.77
COL12A1-207ENST00000483888 DNAH1Q9P2D7 4330 aa3.97□□□□□ -1.77
COL12A1-207ENST00000483888 VPS13BQ7Z7G8 4022 aa3.96□□□□□ -1.77
COL12A1-207ENST00000483888 DNAH6Q9C0G6 4158 aa3.96□□□□□ -1.78
COL12A1-207ENST00000483888 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
COL12A1-207ENST00000483888 KMT2AQ03164 3969 aa3.92□□□□□ -1.78
COL12A1-207ENST00000483888 DNAH7Q8WXX0 4024 aa3.92□□□□□ -1.78
COL12A1-207ENST00000483888 DNAH10Q8IVF4 4471 aa3.91□□□□□ -1.78
COL12A1-207ENST00000483888 KRTAP10-4P60372 401 aaPredicted RBP3.89□□□□□ -1.79
COL12A1-207ENST00000483888 KRTAP8-1Q8IUC2 63 aa3.88□□□□□ -1.79
COL12A1-207ENST00000483888 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.79
COL12A1-207ENST00000483888 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
COL12A1-207ENST00000483888 MT3P25713 68 aa3.8□□□□□ -1.8
COL12A1-207ENST00000483888 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
COL12A1-207ENST00000483888 SPRR2GQ9BYE4 73 aa3.77□□□□□ -1.81
COL12A1-207ENST00000483888 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
COL12A1-207ENST00000483888 DNAH11Q96DT5 4516 aa3.71□□□□□ -1.82
COL12A1-207ENST00000483888 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
COL12A1-207ENST00000483888 FLGP20930 4061 aaPredicted RBP3.67□□□□□ -1.82
COL12A1-207ENST00000483888 KRTAP4-5Q9BYR2 181 aa3.66□□□□□ -1.82
COL12A1-207ENST00000483888 KRTAP10-7P60409 375 aaPredicted RBP3.66□□□□□ -1.82
COL12A1-207ENST00000483888 DNAH17Q9UFH2 4485 aa3.65□□□□□ -1.82
COL12A1-207ENST00000483888 KRTAP4-1Q9BYQ7 146 aa3.64□□□□□ -1.83
COL12A1-207ENST00000483888 VPS13DQ5THJ4 4388 aa3.64□□□□□ -1.83
COL12A1-207ENST00000483888 DNAH9Q9NYC9 4486 aa3.62□□□□□ -1.83
COL12A1-207ENST00000483888 PRKDCP78527 4128 aaKnown RBP3.59□□□□□ -1.83
COL12A1-207ENST00000483888 FAT2Q9NYQ8 4349 aa3.56□□□□□ -1.84
COL12A1-207ENST00000483888 MT2AP02795 61 aa3.56□□□□□ -1.84
COL12A1-207ENST00000483888 MT1HP80294 61 aa3.55□□□□□ -1.84
COL12A1-207ENST00000483888 DYNC2H1Q8NCM8 4307 aaKnown RBP3.55□□□□□ -1.84
COL12A1-207ENST00000483888 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
COL12A1-207ENST00000483888 MT1FP04733 61 aa3.5□□□□□ -1.85
COL12A1-207ENST00000483888 SPRR2FQ96RM1 72 aa3.49□□□□□ -1.85
COL12A1-207ENST00000483888 MT1GP13640 62 aa3.48□□□□□ -1.85
COL12A1-207ENST00000483888 PLECQ15149 4684 aaKnown RBP3.48□□□□□ -1.85
COL12A1-207ENST00000483888 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
COL12A1-207ENST00000483888 APOBP04114 4563 aaKnown RBP3.45□□□□□ -1.86
COL12A1-207ENST00000483888 STARD9Q9P2P6 4700 aa3.43□□□□□ -1.86
COL12A1-207ENST00000483888 PRM1P04553 51 aa3.43□□□□□ -1.86
COL12A1-207ENST00000483888 MT1XP80297 61 aa3.4□□□□□ -1.86
COL12A1-207ENST00000483888 FAT1Q14517 4588 aa3.38□□□□□ -1.87
COL12A1-207ENST00000483888 DNAH5Q8TE73 4624 aa3.38□□□□□ -1.87
COL12A1-207ENST00000483888 KRTAP19-1Q8IUB9 90 aa3.38□□□□□ -1.87
COL12A1-207ENST00000483888 PKHD1L1Q86WI1 4243 aa3.37□□□□□ -1.87
COL12A1-207ENST00000483888 PKD1P98161 4303 aa3.34□□□□□ -1.87
COL12A1-207ENST00000483888 KRTAP19-8Q3LI54 63 aa3.34□□□□□ -1.88
COL12A1-207ENST00000483888 SACSQ9NZJ4 4579 aa3.32□□□□□ -1.88
COL12A1-207ENST00000483888 LRP1BQ9NZR2 4599 aa3.29□□□□□ -1.88
COL12A1-207ENST00000483888 KRTAP4-8A0A0G2JLE6 195 aa3.25□□□□□ -1.89
COL12A1-207ENST00000483888 KRTAP4-8Q9BYQ9 185 aa3.25□□□□□ -1.89
COL12A1-207ENST00000483888 DYNC1H1Q14204 4646 aaKnown RBP3.22□□□□□ -1.89
COL12A1-207ENST00000483888 KRTAP4-7Q9BYR0 210 aa3.22□□□□□ -1.89
COL12A1-207ENST00000483888 HSPG2P98160 4391 aa3.21□□□□□ -1.9
COL12A1-207ENST00000483888 PKHD1P08F94 4074 aa3.21□□□□□ -1.9
COL12A1-207ENST00000483888 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.9
COL12A1-207ENST00000483888 MT1BP07438 61 aa3.2□□□□□ -1.9
COL12A1-207ENST00000483888 SPRR2EP22531 72 aa3.19□□□□□ -1.9
COL12A1-207ENST00000483888 SPRR2BP35325 72 aa3.19□□□□□ -1.9
COL12A1-207ENST00000483888 SPRR2AP35326 72 aa3.19□□□□□ -1.9
COL12A1-207ENST00000483888 MT1LQ93083 61 aa3.18□□□□□ -1.9
COL12A1-207ENST00000483888 MYCBP2O75592 4640 aa3.17□□□□□ -1.9
COL12A1-207ENST00000483888 LCE2BO14633 110 aa3.14□□□□□ -1.91
COL12A1-207ENST00000483888 TNXBP22105 4242 aa3.14□□□□□ -1.91
COL12A1-207ENST00000483888 FAT3Q8TDW7 4589 aa3.09□□□□□ -1.91
COL12A1-207ENST00000483888 LOC100996750A0A140TA64 210 aa3.08□□□□□ -1.92
COL12A1-207ENST00000483888 SPRR2DP22532 72 aa3.07□□□□□ -1.92
COL12A1-207ENST00000483888 KRTAP2-3P0C7H8 128 aa3.07□□□□□ -1.92
COL12A1-207ENST00000483888 KRTAP2-4Q9BYR9 128 aa3.07□□□□□ -1.92
COL12A1-207ENST00000483888 KRTAP2-1Q9BYU5 128 aa3.07□□□□□ -1.92
COL12A1-207ENST00000483888 KRTAP9-8Q9BYQ0 159 aa3.06□□□□□ -1.92
COL12A1-207ENST00000483888 LCE2CQ5TA81 110 aa3.05□□□□□ -1.92
COL12A1-207ENST00000483888 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
COL12A1-207ENST00000483888 MT1EP04732 61 aa3.04□□□□□ -1.92
COL12A1-207ENST00000483888 LPAP08519 4548 aa3.01□□□□□ -1.93
COL12A1-207ENST00000483888 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
COL12A1-207ENST00000483888 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
COL12A1-207ENST00000483888 MT1MQ8N339 61 aa2.94□□□□□ -1.94
COL12A1-207ENST00000483888 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
COL12A1-207ENST00000483888 LRP2P98164 4655 aa2.91□□□□□ -1.94
COL12A1-207ENST00000483888 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
COL12A1-207ENST00000483888 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
COL12A1-207ENST00000483888 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
COL12A1-207ENST00000483888 MT1AP04731 61 aa2.87□□□□□ -1.95
COL12A1-207ENST00000483888 KRTAP9-7A8MTY7 169 aa2.85□□□□□ -1.95
COL12A1-207ENST00000483888 MUC17Q685J3 4493 aa2.83□□□□□ -1.96
COL12A1-207ENST00000483888 LCE2DQ5TA82 110 aaPredicted RBP2.82□□□□□ -1.96
COL12A1-207ENST00000483888 KRTAP17-1Q9BYP8 105 aa2.8□□□□□ -1.96
COL12A1-207ENST00000483888 KRTAP9-2Q9BYQ4 174 aa2.79□□□□□ -1.96
COL12A1-207ENST00000483888 MT4P47944 62 aa2.78□□□□□ -1.96
COL12A1-207ENST00000483888 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms