RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 KIAA1109Q2LD37 5005 aa6.04□□□□□ -1.44
EWSR1-217ENST00000483415 TNXBP22105 4242 aa6.03□□□□□ -1.44
EWSR1-217ENST00000483415 A8MUU9 505 aa6.02□□□□□ -1.45
EWSR1-217ENST00000483415 IGKV2-30P06310 120 aa6.01□□□□□ -1.45
EWSR1-217ENST00000483415 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
EWSR1-217ENST00000483415 P0C880 135 aa5.97□□□□□ -1.45
EWSR1-217ENST00000483415 H0YAA0 97 aa5.94□□□□□ -1.46
EWSR1-217ENST00000483415 J3QL48 77 aa5.9□□□□□ -1.46
EWSR1-217ENST00000483415 TPRXLQ17RH7 258 aa5.9□□□□□ -1.47
EWSR1-217ENST00000483415 IGKV2D-30A0A075B6S6 120 aa5.89□□□□□ -1.47
EWSR1-217ENST00000483415 KRTAP16-1A8MUX0 517 aa5.87□□□□□ -1.47
EWSR1-217ENST00000483415 MYCBP2O75592 4640 aa5.87□□□□□ -1.47
EWSR1-217ENST00000483415 FLG2Q5D862 2391 aaPredicted RBP5.87□□□□□ -1.47
EWSR1-217ENST00000483415 ABCA13Q86UQ4 5058 aa5.84□□□□□ -1.47
EWSR1-217ENST00000483415 C20orf166-AS1Q96NR2 134 aa5.84□□□□□ -1.48
EWSR1-217ENST00000483415 XP32Q5T750 250 aa5.81□□□□□ -1.48
EWSR1-217ENST00000483415 LRP1Q07954 4544 aaKnown RBP5.81□□□□□ -1.48
EWSR1-217ENST00000483415 CRIPTQ9P021 101 aa5.78□□□□□ -1.48
EWSR1-217ENST00000483415 A0A1B0GU33 70 aa5.75□□□□□ -1.49
EWSR1-217ENST00000483415 RPL37P61927 97 aaKnown RBP5.75□□□□□ -1.49
EWSR1-217ENST00000483415 H1FX-AS1Q4G0G2 97 aa5.74□□□□□ -1.49
EWSR1-217ENST00000483415 MUC17Q685J3 4493 aa5.73□□□□□ -1.49
EWSR1-217ENST00000483415 PCLOQ9Y6V0 5065 aa5.72□□□□□ -1.49
EWSR1-217ENST00000483415 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
EWSR1-217ENST00000483415 SEC61BP60468 96 aaKnown RBP5.67□□□□□ -1.5
EWSR1-217ENST00000483415 NDUFAF8A1L188 74 aa5.65□□□□□ -1.51
EWSR1-217ENST00000483415 KRTAP3-1Q9BYR8 98 aa5.64□□□□□ -1.51
EWSR1-217ENST00000483415 C9orf92A6NGG3 77 aa5.62□□□□□ -1.51
EWSR1-217ENST00000483415 SPINT4Q6UDR6 99 aa5.62□□□□□ -1.51
EWSR1-217ENST00000483415 COX6B2Q6YFQ2 88 aa5.61□□□□□ -1.51
EWSR1-217ENST00000483415 K7ERS5 55 aa5.61□□□□□ -1.51
EWSR1-217ENST00000483415 A0A0A0MQY5 61 aa5.58□□□□□ -1.52
EWSR1-217ENST00000483415 DMBT1Q9UGM3 2413 aaPredicted RBP5.55□□□□□ -1.52
EWSR1-217ENST00000483415 C10orf95Q9H7T3 257 aa5.53□□□□□ -1.52
EWSR1-217ENST00000483415 HMCN2Q8NDA2 5059 aa5.52□□□□□ -1.53
EWSR1-217ENST00000483415 HERC1Q15751 4861 aa5.52□□□□□ -1.53
EWSR1-217ENST00000483415 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
EWSR1-217ENST00000483415 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
EWSR1-217ENST00000483415 LCE2BO14633 110 aa5.39□□□□□ -1.55
EWSR1-217ENST00000483415 A0A0D9SG42 100 aa5.38□□□□□ -1.55
EWSR1-217ENST00000483415 LPAP08519 4548 aa5.37□□□□□ -1.55
EWSR1-217ENST00000483415 KRTAP4-1Q9BYQ7 146 aa5.35□□□□□ -1.55
EWSR1-217ENST00000483415 S4R3F8 94 aa5.35□□□□□ -1.55
EWSR1-217ENST00000483415 KRTAP19-2Q3LHN2 52 aa5.35□□□□□ -1.55
EWSR1-217ENST00000483415 LRP2P98164 4655 aa5.34□□□□□ -1.55
EWSR1-217ENST00000483415 KRTAP12-2P59991 146 aa5.33□□□□□ -1.56
EWSR1-217ENST00000483415 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
EWSR1-217ENST00000483415 KRTAP12-1P59990 96 aa5.26□□□□□ -1.57
EWSR1-217ENST00000483415 LCE2CQ5TA81 110 aa5.23□□□□□ -1.57
EWSR1-217ENST00000483415 RNF213Q63HN8 5207 aa5.13□□□□□ -1.59
EWSR1-217ENST00000483415 PLAC4Q8WY50 150 aa5.12□□□□□ -1.59
EWSR1-217ENST00000483415 MT1HP80294 61 aa5.12□□□□□ -1.59
EWSR1-217ENST00000483415 FLGP20930 4061 aaPredicted RBP5.11□□□□□ -1.59
EWSR1-217ENST00000483415 LCE2AQ5TA79 106 aaPredicted RBP5.09□□□□□ -1.59
EWSR1-217ENST00000483415 M0QZ58 72 aa5.03□□□□□ -1.6
EWSR1-217ENST00000483415 UBR4Q5T4S7 5183 aa5.02□□□□□ -1.61
EWSR1-217ENST00000483415 LORP23490 312 aaPredicted RBP4.97□□□□□ -1.61
EWSR1-217ENST00000483415 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
EWSR1-217ENST00000483415 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
EWSR1-217ENST00000483415 M0R2T5 61 aa4.91□□□□□ -1.62
EWSR1-217ENST00000483415 MT2AP02795 61 aa4.88□□□□□ -1.63
EWSR1-217ENST00000483415 SPRR2GQ9BYE4 73 aa4.84□□□□□ -1.63
EWSR1-217ENST00000483415 MUC2Q02817 5179 aa4.83□□□□□ -1.64
EWSR1-217ENST00000483415 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
EWSR1-217ENST00000483415 MT1FP04733 61 aa4.81□□□□□ -1.64
EWSR1-217ENST00000483415 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
EWSR1-217ENST00000483415 KRTAP9-3Q9BYQ3 159 aa4.78□□□□□ -1.64
EWSR1-217ENST00000483415 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
EWSR1-217ENST00000483415 R4GN34 69 aa4.76□□□□□ -1.65
EWSR1-217ENST00000483415 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
EWSR1-217ENST00000483415 KRTAP19-1Q8IUB9 90 aa4.72□□□□□ -1.65
EWSR1-217ENST00000483415 PRO2289Q9P1D8 64 aa4.69□□□□□ -1.66
EWSR1-217ENST00000483415 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
EWSR1-217ENST00000483415 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
EWSR1-217ENST00000483415 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
EWSR1-217ENST00000483415 MT1BP07438 61 aa4.58□□□□□ -1.68
EWSR1-217ENST00000483415 INE1O15225 51 aa4.52□□□□□ -1.69
EWSR1-217ENST00000483415 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
EWSR1-217ENST00000483415 TNP1P09430 55 aa4.48□□□□□ -1.69
EWSR1-217ENST00000483415 KRTAP10-5P60370 271 aa4.46□□□□□ -1.7
EWSR1-217ENST00000483415 KRTAP9-2Q9BYQ4 174 aa4.45□□□□□ -1.7
EWSR1-217ENST00000483415 MT1XP80297 61 aa4.39□□□□□ -1.71
EWSR1-217ENST00000483415 CRCT1Q9UGL9 99 aa4.31□□□□□ -1.72
EWSR1-217ENST00000483415 USH2AO75445 5202 aa4.31□□□□□ -1.72
EWSR1-217ENST00000483415 SSPOA2VEC9 5147 aa4.28□□□□□ -1.72
EWSR1-217ENST00000483415 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
EWSR1-217ENST00000483415 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
EWSR1-217ENST00000483415 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
EWSR1-217ENST00000483415 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
EWSR1-217ENST00000483415 KRTAP8-1Q8IUC2 63 aa4.16□□□□□ -1.74
EWSR1-217ENST00000483415 KRTAP10-7P60409 375 aaPredicted RBP4.12□□□□□ -1.75
EWSR1-217ENST00000483415 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
EWSR1-217ENST00000483415 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
EWSR1-217ENST00000483415 FCGBPQ9Y6R7 5405 aaPredicted RBP4.02□□□□□ -1.77
EWSR1-217ENST00000483415 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
EWSR1-217ENST00000483415 KRTAP9-1A8MXZ3 250 aaPredicted RBP4□□□□□ -1.77
EWSR1-217ENST00000483415 KRTAP12-3P60328 96 aa4□□□□□ -1.77
EWSR1-217ENST00000483415 KRTAP9-7A8MTY7 169 aa3.99□□□□□ -1.77
EWSR1-217ENST00000483415 KRTAP4-8Q9BYQ9 185 aa3.95□□□□□ -1.78
EWSR1-217ENST00000483415 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms