RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 KALRNO60229 2985 aa0.6□□□□□ -2.31
PTPN12-211ENST00000481154 HRNRQ86YZ3 2850 aaPredicted RBP0.59□□□□□ -2.31
PTPN12-211ENST00000481154 HIVEP1P15822 2718 aa0.59□□□□□ -2.31
PTPN12-211ENST00000481154 NBPF19A0A087WUL8 3843 aa0.59□□□□□ -2.31
PTPN12-211ENST00000481154 SPRR2DP22532 72 aa0.59□□□□□ -2.31
PTPN12-211ENST00000481154 SONP18583 2426 aaKnown RBP0.59□□□□□ -2.32
PTPN12-211ENST00000481154 TNXBP22105 4242 aa0.59□□□□□ -2.32
PTPN12-211ENST00000481154 LRBAP50851 2863 aa0.59□□□□□ -2.32
PTPN12-211ENST00000481154 USP9XQ93008 2570 aaPredicted RBP0.58□□□□□ -2.32
PTPN12-211ENST00000481154 CUBNO60494 3623 aa0.58□□□□□ -2.32
PTPN12-211ENST00000481154 FRAS1Q86XX4 4008 aa0.58□□□□□ -2.32
PTPN12-211ENST00000481154 DNAH12Q6ZR08 3092 aa0.58□□□□□ -2.32
PTPN12-211ENST00000481154 SMR3BP02814 79 aaPredicted RBP0.58□□□□□ -2.32
PTPN12-211ENST00000481154 SPRR2BP35325 72 aa0.58□□□□□ -2.32
PTPN12-211ENST00000481154 CFAP46Q8IYW2 2715 aa0.58□□□□□ -2.32
PTPN12-211ENST00000481154 FRYLO94915 3013 aa0.57□□□□□ -2.32
PTPN12-211ENST00000481154 DMXL2Q8TDJ6 3036 aa0.57□□□□□ -2.32
PTPN12-211ENST00000481154 DNAH8Q96JB1 4490 aa0.57□□□□□ -2.32
PTPN12-211ENST00000481154 FASNP49327 2511 aaKnown RBP0.57□□□□□ -2.32
PTPN12-211ENST00000481154 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
PTPN12-211ENST00000481154 MYO18BQ8IUG5 2567 aa0.57□□□□□ -2.32
PTPN12-211ENST00000481154 RANBP2P49792 3224 aaKnown RBP0.57□□□□□ -2.32
PTPN12-211ENST00000481154 MXRA5Q9NR99 2828 aa0.57□□□□□ -2.32
PTPN12-211ENST00000481154 PRUNE2Q8WUY3 3088 aa0.57□□□□□ -2.32
PTPN12-211ENST00000481154 SPTBN5Q9NRC6 3674 aaKnown RBP0.57□□□□□ -2.32
PTPN12-211ENST00000481154 HUWE1Q7Z6Z7 4374 aaKnown RBP0.57□□□□□ -2.32
PTPN12-211ENST00000481154 TEP1Q99973 2627 aaKnown RBP0.56□□□□□ -2.32
PTPN12-211ENST00000481154 ATMQ13315 3056 aa0.56□□□□□ -2.32
PTPN12-211ENST00000481154 NIPBLQ6KC79 2804 aaeCLIP0.56□□□□□ -2.32
PTPN12-211ENST00000481154 ANK3Q12955 4377 aaKnown RBP0.56□□□□□ -2.32
PTPN12-211ENST00000481154 TLN2Q9Y4G6 2542 aa0.56□□□□□ -2.32
PTPN12-211ENST00000481154 LAMA5O15230 3695 aa0.56□□□□□ -2.32
PTPN12-211ENST00000481154 MAP1AP78559 2803 aaPredicted RBP0.55□□□□□ -2.32
PTPN12-211ENST00000481154 SPRR2AP35326 72 aa0.55□□□□□ -2.32
PTPN12-211ENST00000481154 ADGRG4Q8IZF6 3080 aa0.55□□□□□ -2.32
PTPN12-211ENST00000481154 SMG1Q96Q15 3661 aaKnown RBP0.54□□□□□ -2.32
PTPN12-211ENST00000481154 DNAH3Q8TD57 4116 aa0.54□□□□□ -2.32
PTPN12-211ENST00000481154 MUC5ACP98088 5654 aa0.54□□□□□ -2.32
PTPN12-211ENST00000481154 HTN3P15516 51 aa0.54□□□□□ -2.32
PTPN12-211ENST00000481154 AKAP9Q99996 3911 aa0.54□□□□□ -2.32
PTPN12-211ENST00000481154 CSMD1Q96PZ7 3565 aa0.54□□□□□ -2.32
PTPN12-211ENST00000481154 TGP01266 2768 aa0.54□□□□□ -2.32
PTPN12-211ENST00000481154 TEX15Q9BXT5 2789 aa0.54□□□□□ -2.32
PTPN12-211ENST00000481154 DNAH2Q9P225 4427 aa0.54□□□□□ -2.32
PTPN12-211ENST00000481154 RELNP78509 3460 aa0.54□□□□□ -2.32
PTPN12-211ENST00000481154 ITPR2Q14571 2701 aa0.53□□□□□ -2.32
PTPN12-211ENST00000481154 MGAM2Q2M2H8 2515 aa0.53□□□□□ -2.32
PTPN12-211ENST00000481154 C5orf42Q9H799 3197 aa0.53□□□□□ -2.32
PTPN12-211ENST00000481154 MAST4O15021 2626 aa0.53□□□□□ -2.32
PTPN12-211ENST00000481154 NBEAL1Q6ZS30 2694 aa0.53□□□□□ -2.32
PTPN12-211ENST00000481154 PKHD1L1Q86WI1 4243 aa0.53□□□□□ -2.32
PTPN12-211ENST00000481154 SVEP1Q4LDE5 3571 aa0.52□□□□□ -2.33
PTPN12-211ENST00000481154 KRTAP19-5Q3LI72 72 aa0.52□□□□□ -2.33
PTPN12-211ENST00000481154 FLNAP21333 2647 aaKnown RBP0.52□□□□□ -2.33
PTPN12-211ENST00000481154 FLGP20930 4061 aaPredicted RBP0.52□□□□□ -2.33
PTPN12-211ENST00000481154 TRIOO75962 3097 aa0.52□□□□□ -2.33
PTPN12-211ENST00000481154 HSPG2P98160 4391 aa0.51□□□□□ -2.33
PTPN12-211ENST00000481154 DNAH9Q9NYC9 4486 aa0.51□□□□□ -2.33
PTPN12-211ENST00000481154 KRTAP6-2Q3LI66 62 aa0.51□□□□□ -2.33
PTPN12-211ENST00000481154 DOPEY1Q5JWR5 2465 aa0.51□□□□□ -2.33
PTPN12-211ENST00000481154 IGSF10Q6WRI0 2623 aa0.51□□□□□ -2.33
PTPN12-211ENST00000481154 MKI67P46013 3256 aaKnown RBP0.51□□□□□ -2.33
PTPN12-211ENST00000481154 COL6A3P12111 3177 aa0.51□□□□□ -2.33
PTPN12-211ENST00000481154 HTTP42858 3142 aa0.51□□□□□ -2.33
PTPN12-211ENST00000481154 HECTD4Q9Y4D8 3996 aa0.5□□□□□ -2.33
PTPN12-211ENST00000481154 DNAH10Q8IVF4 4471 aa0.5□□□□□ -2.33
PTPN12-211ENST00000481154 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
PTPN12-211ENST00000481154 LAMA3Q16787 3333 aa0.5□□□□□ -2.33
PTPN12-211ENST00000481154 PKD1P98161 4303 aa0.5□□□□□ -2.33
PTPN12-211ENST00000481154 SPRR2FQ96RM1 72 aa0.49□□□□□ -2.33
PTPN12-211ENST00000481154 SPTAN1Q13813 2472 aaKnown RBP0.49□□□□□ -2.33
PTPN12-211ENST00000481154 CENPEQ02224 2701 aa0.48□□□□□ -2.33
PTPN12-211ENST00000481154 CEP295Q9C0D2 2601 aa0.48□□□□□ -2.33
PTPN12-211ENST00000481154 SPRR2EP22531 72 aa0.48□□□□□ -2.33
PTPN12-211ENST00000481154 DMDP11532 3685 aa0.48□□□□□ -2.33
PTPN12-211ENST00000481154 DNAH7Q8WXX0 4024 aa0.48□□□□□ -2.33
PTPN12-211ENST00000481154 LAMA1P25391 3075 aa0.48□□□□□ -2.33
PTPN12-211ENST00000481154 LPAP08519 4548 aa0.48□□□□□ -2.33
PTPN12-211ENST00000481154 SZT2Q5T011 3432 aa0.47□□□□□ -2.33
PTPN12-211ENST00000481154 DNAH6Q9C0G6 4158 aa0.47□□□□□ -2.33
PTPN12-211ENST00000481154 APOBP04114 4563 aaKnown RBP0.47□□□□□ -2.33
PTPN12-211ENST00000481154 CEP350Q5VT06 3117 aa0.47□□□□□ -2.33
PTPN12-211ENST00000481154 FAT3Q8TDW7 4589 aa0.46□□□□□ -2.34
PTPN12-211ENST00000481154 SYNE1Q8NF91 8797 aaKnown RBP0.46□□□□□ -2.34
PTPN12-211ENST00000481154 LRP1Q07954 4544 aaKnown RBP0.46□□□□□ -2.34
PTPN12-211ENST00000481154 BOD1L1Q8NFC6 3051 aa0.45□□□□□ -2.34
PTPN12-211ENST00000481154 DEFB4AO15263 64 aa0.45□□□□□ -2.34
PTPN12-211ENST00000481154 MT1EP04732 61 aa0.45□□□□□ -2.34
PTPN12-211ENST00000481154 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
PTPN12-211ENST00000481154 FREM2Q5SZK8 3169 aa0.45□□□□□ -2.34
PTPN12-211ENST00000481154 DNAH1Q9P2D7 4330 aa0.44□□□□□ -2.34
PTPN12-211ENST00000481154 WDFY4Q6ZS81 3184 aa0.43□□□□□ -2.34
PTPN12-211ENST00000481154 CSMD2Q7Z408 3487 aa0.43□□□□□ -2.34
PTPN12-211ENST00000481154 MT1HP80294 61 aa0.43□□□□□ -2.34
PTPN12-211ENST00000481154 DNAH17Q9UFH2 4485 aa0.43□□□□□ -2.34
PTPN12-211ENST00000481154 SYNE2Q8WXH0 6885 aaKnown RBP0.43□□□□□ -2.34
PTPN12-211ENST00000481154 VPS13CQ709C8 3753 aa0.43□□□□□ -2.34
PTPN12-211ENST00000481154 DCHS1Q96JQ0 3298 aa0.42□□□□□ -2.34
PTPN12-211ENST00000481154 FAT1Q14517 4588 aa0.42□□□□□ -2.34
PTPN12-211ENST00000481154 MT1LQ93083 61 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms