RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 SSBP3-AS1Q7Z2R9 100 aa4.05□□□□□ -1.76
PKP4-211ENST00000481115 TYMSOSQ8TAI1 123 aa4.05□□□□□ -1.76
PKP4-211ENST00000481115 A0A1B0GU33 70 aa4.04□□□□□ -1.76
PKP4-211ENST00000481115 H0YAA0 97 aa4.04□□□□□ -1.76
PKP4-211ENST00000481115 FRAS1Q86XX4 4008 aa4.04□□□□□ -1.76
PKP4-211ENST00000481115 NBDYA0A0U1RRE5 68 aa4.03□□□□□ -1.76
PKP4-211ENST00000481115 KRTAP1-5Q9BYS1 174 aa4.03□□□□□ -1.76
PKP4-211ENST00000481115 H1FX-AS1Q4G0G2 97 aa4.02□□□□□ -1.77
PKP4-211ENST00000481115 RYR3Q15413 4870 aa4.02□□□□□ -1.77
PKP4-211ENST00000481115 DNAH2Q9P225 4427 aa4.01□□□□□ -1.77
PKP4-211ENST00000481115 A0A087WTM6 91 aa4.01□□□□□ -1.77
PKP4-211ENST00000481115 DNAH10Q8IVF4 4471 aa4□□□□□ -1.77
PKP4-211ENST00000481115 DNAH17Q9UFH2 4485 aa3.99□□□□□ -1.77
PKP4-211ENST00000481115 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
PKP4-211ENST00000481115 Q6ZRN7 208 aaPredicted RBP3.99□□□□□ -1.77
PKP4-211ENST00000481115 FAT2Q9NYQ8 4349 aa3.99□□□□□ -1.77
PKP4-211ENST00000481115 PSORS1C2Q9UIG4 136 aa3.97□□□□□ -1.77
PKP4-211ENST00000481115 HECTD4Q9Y4D8 3996 aa3.95□□□□□ -1.78
PKP4-211ENST00000481115 DNAH5Q8TE73 4624 aa3.94□□□□□ -1.78
PKP4-211ENST00000481115 DNAH11Q96DT5 4516 aa3.93□□□□□ -1.78
PKP4-211ENST00000481115 SPACA4Q8TDM5 124 aa3.93□□□□□ -1.78
PKP4-211ENST00000481115 A0A1B0GVY2 172 aa3.92□□□□□ -1.78
PKP4-211ENST00000481115 RPL37P61927 97 aaKnown RBP3.92□□□□□ -1.78
PKP4-211ENST00000481115 PKD1P98161 4303 aa3.91□□□□□ -1.78
PKP4-211ENST00000481115 SPINK6Q6UWN8 80 aa3.91□□□□□ -1.78
PKP4-211ENST00000481115 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
PKP4-211ENST00000481115 PKHD1P08F94 4074 aa3.9□□□□□ -1.79
PKP4-211ENST00000481115 EPPK1P58107 5090 aaKnown RBP3.89□□□□□ -1.79
PKP4-211ENST00000481115 CRIPTQ9P021 101 aa3.89□□□□□ -1.79
PKP4-211ENST00000481115 DNAH8Q96JB1 4490 aa3.89□□□□□ -1.79
PKP4-211ENST00000481115 DYNC1H1Q14204 4646 aaKnown RBP3.88□□□□□ -1.79
PKP4-211ENST00000481115 LRP1BQ9NZR2 4599 aa3.88□□□□□ -1.79
PKP4-211ENST00000481115 CIRBP-AS1Q8TBR5 109 aa3.87□□□□□ -1.79
PKP4-211ENST00000481115 TPRXLQ17RH7 258 aa3.85□□□□□ -1.79
PKP4-211ENST00000481115 SPINK1P00995 79 aa3.84□□□□□ -1.79
PKP4-211ENST00000481115 BIRC6Q9NR09 4857 aa3.84□□□□□ -1.8
PKP4-211ENST00000481115 RPS29P62273 56 aaKnown RBP3.83□□□□□ -1.8
PKP4-211ENST00000481115 KRTAP10-1P60331 282 aa3.82□□□□□ -1.8
PKP4-211ENST00000481115 APOBP04114 4563 aaKnown RBP3.82□□□□□ -1.8
PKP4-211ENST00000481115 RYR1P21817 5038 aa3.81□□□□□ -1.8
PKP4-211ENST00000481115 KIAA1109Q2LD37 5005 aa3.78□□□□□ -1.8
PKP4-211ENST00000481115 HSPG2P98160 4391 aa3.78□□□□□ -1.8
PKP4-211ENST00000481115 VPS13BQ7Z7G8 4022 aa3.76□□□□□ -1.81
PKP4-211ENST00000481115 HERC2O95714 4834 aa3.72□□□□□ -1.81
PKP4-211ENST00000481115 FAT1Q14517 4588 aa3.72□□□□□ -1.81
PKP4-211ENST00000481115 SMR3BP02814 79 aaPredicted RBP3.7□□□□□ -1.82
PKP4-211ENST00000481115 MT3P25713 68 aa3.7□□□□□ -1.82
PKP4-211ENST00000481115 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
PKP4-211ENST00000481115 KRTAP10-4P60372 401 aaPredicted RBP3.7□□□□□ -1.82
PKP4-211ENST00000481115 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
PKP4-211ENST00000481115 SRRM2Q9UQ35 2752 aaKnown RBP3.69□□□□□ -1.82
PKP4-211ENST00000481115 PKHD1L1Q86WI1 4243 aa3.69□□□□□ -1.82
PKP4-211ENST00000481115 KRTAP13-2Q52LG2 175 aa3.69□□□□□ -1.82
PKP4-211ENST00000481115 S4R3F8 94 aa3.69□□□□□ -1.82
PKP4-211ENST00000481115 FLG2Q5D862 2391 aaPredicted RBP3.69□□□□□ -1.82
PKP4-211ENST00000481115 Q5VSD8 79 aa3.68□□□□□ -1.82
PKP4-211ENST00000481115 PLAC4Q8WY50 150 aa3.68□□□□□ -1.82
PKP4-211ENST00000481115 ABCA13Q86UQ4 5058 aa3.65□□□□□ -1.83
PKP4-211ENST00000481115 M0QZ58 72 aa3.64□□□□□ -1.83
PKP4-211ENST00000481115 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
PKP4-211ENST00000481115 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
PKP4-211ENST00000481115 PCLOQ9Y6V0 5065 aa3.62□□□□□ -1.83
PKP4-211ENST00000481115 KRTAP1-4P0C5Y4 121 aa3.61□□□□□ -1.83
PKP4-211ENST00000481115 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
PKP4-211ENST00000481115 FAT3Q8TDW7 4589 aa3.6□□□□□ -1.83
PKP4-211ENST00000481115 TNXBP22105 4242 aa3.59□□□□□ -1.83
PKP4-211ENST00000481115 KRTAP12-1P59990 96 aa3.59□□□□□ -1.83
PKP4-211ENST00000481115 LRP1Q07954 4544 aaKnown RBP3.58□□□□□ -1.84
PKP4-211ENST00000481115 MYCBP2O75592 4640 aa3.57□□□□□ -1.84
PKP4-211ENST00000481115 A0A0D9SG42 100 aa3.56□□□□□ -1.84
PKP4-211ENST00000481115 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
PKP4-211ENST00000481115 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
PKP4-211ENST00000481115 MT1HL1P0DM35 61 aa3.53□□□□□ -1.84
PKP4-211ENST00000481115 KRTAP10-8P60410 259 aa3.52□□□□□ -1.85
PKP4-211ENST00000481115 DMBT1Q9UGM3 2413 aaPredicted RBP3.52□□□□□ -1.85
PKP4-211ENST00000481115 INE1O15225 51 aa3.47□□□□□ -1.85
PKP4-211ENST00000481115 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
PKP4-211ENST00000481115 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
PKP4-211ENST00000481115 HERC1Q15751 4861 aa3.42□□□□□ -1.86
PKP4-211ENST00000481115 C9orf92A6NGG3 77 aa3.4□□□□□ -1.87
PKP4-211ENST00000481115 HMCN2Q8NDA2 5059 aa3.38□□□□□ -1.87
PKP4-211ENST00000481115 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
PKP4-211ENST00000481115 R4GN34 69 aa3.37□□□□□ -1.87
PKP4-211ENST00000481115 LPAP08519 4548 aa3.32□□□□□ -1.88
PKP4-211ENST00000481115 LRP2P98164 4655 aa3.3□□□□□ -1.88
PKP4-211ENST00000481115 UBR4Q5T4S7 5183 aa3.29□□□□□ -1.88
PKP4-211ENST00000481115 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
PKP4-211ENST00000481115 MUC17Q685J3 4493 aa3.29□□□□□ -1.88
PKP4-211ENST00000481115 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
PKP4-211ENST00000481115 RNF213Q63HN8 5207 aa3.22□□□□□ -1.89
PKP4-211ENST00000481115 TNP1P09430 55 aa3.21□□□□□ -1.9
PKP4-211ENST00000481115 MUC2Q02817 5179 aa3.17□□□□□ -1.9
PKP4-211ENST00000481115 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
PKP4-211ENST00000481115 KRTAP10-12P60413 245 aa3.15□□□□□ -1.91
PKP4-211ENST00000481115 KRTAP4-1Q9BYQ7 146 aa3.15□□□□□ -1.91
PKP4-211ENST00000481115 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
PKP4-211ENST00000481115 KRTAP19-2Q3LHN2 52 aa3.08□□□□□ -1.92
PKP4-211ENST00000481115 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
PKP4-211ENST00000481115 FLGP20930 4061 aaPredicted RBP3.05□□□□□ -1.92
PKP4-211ENST00000481115 KRTAP5-9P26371 169 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 397 ms