RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 ZANQ9Y493 2812 aa0.85□□□□□ -2.27
RC3H1-204ENST00000479099 RPL39P5Q59GN2 51 aa0.85□□□□□ -2.27
RC3H1-204ENST00000479099 IGSF10Q6WRI0 2623 aa0.85□□□□□ -2.27
RC3H1-204ENST00000479099 LAMA5O15230 3695 aa0.85□□□□□ -2.27
RC3H1-204ENST00000479099 MGAQ8IWI9 3026 aa0.84□□□□□ -2.27
RC3H1-204ENST00000479099 APOBP04114 4563 aaKnown RBP0.84□□□□□ -2.27
RC3H1-204ENST00000479099 KALRNO60229 2985 aa0.84□□□□□ -2.27
RC3H1-204ENST00000479099 SPTBN5Q9NRC6 3674 aaKnown RBP0.82□□□□□ -2.28
RC3H1-204ENST00000479099 TLN2Q9Y4G6 2542 aa0.81□□□□□ -2.28
RC3H1-204ENST00000479099 FASNP49327 2511 aaKnown RBP0.81□□□□□ -2.28
RC3H1-204ENST00000479099 MYO18BQ8IUG5 2567 aa0.81□□□□□ -2.28
RC3H1-204ENST00000479099 TEP1Q99973 2627 aaKnown RBP0.81□□□□□ -2.28
RC3H1-204ENST00000479099 TENM3Q9P273 2699 aa0.81□□□□□ -2.28
RC3H1-204ENST00000479099 LRP1BQ9NZR2 4599 aa0.79□□□□□ -2.28
RC3H1-204ENST00000479099 PKHD1P08F94 4074 aa0.79□□□□□ -2.28
RC3H1-204ENST00000479099 AKAP9Q99996 3911 aa0.79□□□□□ -2.28
RC3H1-204ENST00000479099 FAT3Q8TDW7 4589 aa0.78□□□□□ -2.28
RC3H1-204ENST00000479099 SMR3BP02814 79 aaPredicted RBP0.78□□□□□ -2.28
RC3H1-204ENST00000479099 KRTAP19-5Q3LI72 72 aa0.78□□□□□ -2.28
RC3H1-204ENST00000479099 RHPN1-AS1Q9BWJ2 59 aa0.78□□□□□ -2.28
RC3H1-204ENST00000479099 H3BUX3 64 aa0.77□□□□□ -2.29
RC3H1-204ENST00000479099 TGP01266 2768 aa0.77□□□□□ -2.29
RC3H1-204ENST00000479099 COL6A3P12111 3177 aa0.76□□□□□ -2.29
RC3H1-204ENST00000479099 DEFB108AA8MXU0 73 aa0.76□□□□□ -2.29
RC3H1-204ENST00000479099 SPRR2EP22531 72 aa0.76□□□□□ -2.29
RC3H1-204ENST00000479099 USP9XQ93008 2570 aaPredicted RBP0.75□□□□□ -2.29
RC3H1-204ENST00000479099 SVEP1Q4LDE5 3571 aa0.75□□□□□ -2.29
RC3H1-204ENST00000479099 DNAH1Q9P2D7 4330 aa0.75□□□□□ -2.29
RC3H1-204ENST00000479099 RELNP78509 3460 aa0.74□□□□□ -2.29
RC3H1-204ENST00000479099 SPRR2FQ96RM1 72 aa0.74□□□□□ -2.29
RC3H1-204ENST00000479099 HTTP42858 3142 aa0.73□□□□□ -2.29
RC3H1-204ENST00000479099 FAT4Q6V0I7 4981 aa0.72□□□□□ -2.29
RC3H1-204ENST00000479099 TRIOO75962 3097 aa0.72□□□□□ -2.29
RC3H1-204ENST00000479099 MAST4O15021 2626 aa0.72□□□□□ -2.29
RC3H1-204ENST00000479099 HMCN2Q8NDA2 5059 aa0.72□□□□□ -2.29
RC3H1-204ENST00000479099 DNAH10Q8IVF4 4471 aa0.71□□□□□ -2.3
RC3H1-204ENST00000479099 CFAP54Q96N23 3096 aa0.7□□□□□ -2.3
RC3H1-204ENST00000479099 MXRA5Q9NR99 2828 aa0.7□□□□□ -2.3
RC3H1-204ENST00000479099 FLNAP21333 2647 aaKnown RBP0.7□□□□□ -2.3
RC3H1-204ENST00000479099 CEP250Q9BV73 2442 aa0.7□□□□□ -2.3
RC3H1-204ENST00000479099 ITPR1Q14643 2758 aa0.69□□□□□ -2.3
RC3H1-204ENST00000479099 CSMD1Q96PZ7 3565 aa0.69□□□□□ -2.3
RC3H1-204ENST00000479099 FAT1Q14517 4588 aa0.69□□□□□ -2.3
RC3H1-204ENST00000479099 A0A096LNI7 61 aa0.68□□□□□ -2.3
RC3H1-204ENST00000479099 DMXL2Q8TDJ6 3036 aa0.68□□□□□ -2.3
RC3H1-204ENST00000479099 WDR87Q6ZQQ6 2873 aa0.68□□□□□ -2.3
RC3H1-204ENST00000479099 LAMA1P25391 3075 aa0.68□□□□□ -2.3
RC3H1-204ENST00000479099 MAP1AP78559 2803 aaPredicted RBP0.67□□□□□ -2.3
RC3H1-204ENST00000479099 AHNAKQ09666 5890 aaKnown RBP0.67□□□□□ -2.3
RC3H1-204ENST00000479099 MGAM2Q2M2H8 2515 aa0.66□□□□□ -2.3
RC3H1-204ENST00000479099 PLECQ15149 4684 aaKnown RBP0.64□□□□□ -2.31
RC3H1-204ENST00000479099 LAMA3Q16787 3333 aa0.64□□□□□ -2.31
RC3H1-204ENST00000479099 DEFB124Q8NES8 71 aa0.63□□□□□ -2.31
RC3H1-204ENST00000479099 CMYA5Q8N3K9 4069 aa0.61□□□□□ -2.31
RC3H1-204ENST00000479099 ADGRG4Q8IZF6 3080 aa0.61□□□□□ -2.31
RC3H1-204ENST00000479099 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
RC3H1-204ENST00000479099 DEFB1P60022 68 aa0.59□□□□□ -2.31
RC3H1-204ENST00000479099 ATMQ13315 3056 aa0.58□□□□□ -2.32
RC3H1-204ENST00000479099 DEFB136Q30KP8 78 aa0.58□□□□□ -2.32
RC3H1-204ENST00000479099 LRBAP50851 2863 aa0.57□□□□□ -2.32
RC3H1-204ENST00000479099 LRP2P98164 4655 aa0.57□□□□□ -2.32
RC3H1-204ENST00000479099 STAB2Q8WWQ8 2551 aa0.55□□□□□ -2.32
RC3H1-204ENST00000479099 HERC1Q15751 4861 aa0.55□□□□□ -2.32
RC3H1-204ENST00000479099 APELAP0DMC3 54 aa0.55□□□□□ -2.32
RC3H1-204ENST00000479099 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
RC3H1-204ENST00000479099 SPTAN1Q13813 2472 aaKnown RBP0.55□□□□□ -2.32
RC3H1-204ENST00000479099 SMG1Q96Q15 3661 aaKnown RBP0.54□□□□□ -2.32
RC3H1-204ENST00000479099 TEX15Q9BXT5 2789 aa0.53□□□□□ -2.32
RC3H1-204ENST00000479099 NIPBLQ6KC79 2804 aaeCLIP0.53□□□□□ -2.32
RC3H1-204ENST00000479099 NBEAL1Q6ZS30 2694 aa0.52□□□□□ -2.33
RC3H1-204ENST00000479099 DOPEY1Q5JWR5 2465 aa0.52□□□□□ -2.33
RC3H1-204ENST00000479099 TRRAPQ9Y4A5 3859 aa0.51□□□□□ -2.33
RC3H1-204ENST00000479099 FRYLO94915 3013 aa0.5□□□□□ -2.33
RC3H1-204ENST00000479099 DYNC1H1Q14204 4646 aaKnown RBP0.49□□□□□ -2.33
RC3H1-204ENST00000479099 HTN1P15515 57 aa0.49□□□□□ -2.33
RC3H1-204ENST00000479099 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
RC3H1-204ENST00000479099 PRUNE2Q8WUY3 3088 aa0.48□□□□□ -2.33
RC3H1-204ENST00000479099 DNAH17Q9UFH2 4485 aa0.48□□□□□ -2.33
RC3H1-204ENST00000479099 C5orf42Q9H799 3197 aa0.47□□□□□ -2.33
RC3H1-204ENST00000479099 GPR98Q8WXG9 6306 aa0.47□□□□□ -2.33
RC3H1-204ENST00000479099 DNAH5Q8TE73 4624 aa0.46□□□□□ -2.34
RC3H1-204ENST00000479099 DNAH12Q6ZR08 3092 aa0.46□□□□□ -2.34
RC3H1-204ENST00000479099 DEFB133Q30KQ1 61 aa0.46□□□□□ -2.34
RC3H1-204ENST00000479099 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
RC3H1-204ENST00000479099 MT1HP80294 61 aa0.45□□□□□ -2.34
RC3H1-204ENST00000479099 ITPR2Q14571 2701 aa0.42□□□□□ -2.34
RC3H1-204ENST00000479099 MT1EP04732 61 aa0.42□□□□□ -2.34
RC3H1-204ENST00000479099 RPS29P62273 56 aaKnown RBP0.42□□□□□ -2.34
RC3H1-204ENST00000479099 MUC17Q685J3 4493 aa0.41□□□□□ -2.34
RC3H1-204ENST00000479099 CFAP46Q8IYW2 2715 aa0.41□□□□□ -2.34
RC3H1-204ENST00000479099 DMDP11532 3685 aa0.4□□□□□ -2.35
RC3H1-204ENST00000479099 KMT2DO14686 5537 aa0.38□□□□□ -2.35
RC3H1-204ENST00000479099 SZT2Q5T011 3432 aa0.37□□□□□ -2.35
RC3H1-204ENST00000479099 CSMD2Q7Z408 3487 aa0.36□□□□□ -2.35
RC3H1-204ENST00000479099 STATHP02808 62 aa0.35□□□□□ -2.35
RC3H1-204ENST00000479099 MT1LQ93083 61 aa0.35□□□□□ -2.35
RC3H1-204ENST00000479099 MKI67P46013 3256 aaKnown RBP0.33□□□□□ -2.36
RC3H1-204ENST00000479099 VPS13CQ709C8 3753 aa0.33□□□□□ -2.36
RC3H1-204ENST00000479099 SSPOA2VEC9 5147 aa0.33□□□□□ -2.36
RC3H1-204ENST00000479099 SRCAPQ6ZRS2 3230 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms