RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 COX6B2Q6YFQ2 88 aa2.26□□□□□ -2.05
CCDC171-207ENST00000478913 SPRR2FQ96RM1 72 aa2.26□□□□□ -2.05
CCDC171-207ENST00000478913 CDC42SE2Q9NRR3 84 aa2.26□□□□□ -2.05
CCDC171-207ENST00000478913 A0A087WVE0 104 aa2.25□□□□□ -2.05
CCDC171-207ENST00000478913 IGKV3OR2-268A0A0C4DH90 116 aa2.25□□□□□ -2.05
CCDC171-207ENST00000478913 HRES1P13985 223 aa2.25□□□□□ -2.05
CCDC171-207ENST00000478913 MP68P56378 58 aa2.25□□□□□ -2.05
CCDC171-207ENST00000478913 COX6A2Q02221 97 aa2.25□□□□□ -2.05
CCDC171-207ENST00000478913 KLKP1Q107X0 134 aa2.25□□□□□ -2.05
CCDC171-207ENST00000478913 BRK1Q8WUW1 75 aa2.25□□□□□ -2.05
CCDC171-207ENST00000478913 TRBV7-6A0A0J9YX20 115 aa2.24□□□□□ -2.05
CCDC171-207ENST00000478913 A8MTW9 85 aa2.24□□□□□ -2.05
CCDC171-207ENST00000478913 F8WEM9 126 aa2.24□□□□□ -2.05
CCDC171-207ENST00000478913 LYPD5Q6UWN5 251 aa2.24□□□□□ -2.05
CCDC171-207ENST00000478913 SOSTDC1Q6X4U4 206 aa2.24□□□□□ -2.05
CCDC171-207ENST00000478913 Q8IZM0 81 aa2.24□□□□□ -2.05
CCDC171-207ENST00000478913 LINC00337Q8N6G1 96 aa2.24□□□□□ -2.05
CCDC171-207ENST00000478913 R4GN34 69 aa2.24□□□□□ -2.05
CCDC171-207ENST00000478913 TRBV6-8A0A0A6YYG3 113 aa2.23□□□□□ -2.05
CCDC171-207ENST00000478913 A0A1B0GW54 56 aa2.23□□□□□ -2.05
CCDC171-207ENST00000478913 NREPQ16612 68 aa2.23□□□□□ -2.05
CCDC171-207ENST00000478913 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.23□□□□□ -2.05
CCDC171-207ENST00000478913 KTN1-AS1Q86SY8 53 aa2.23□□□□□ -2.05
CCDC171-207ENST00000478913 DIRC1Q969H9 104 aa2.23□□□□□ -2.05
CCDC171-207ENST00000478913 LINC00959A0A1B0GUT2 108 aa2.22□□□□□ -2.05
CCDC171-207ENST00000478913 H7BZZ5 65 aa2.22□□□□□ -2.05
CCDC171-207ENST00000478913 NDUFB1O75438 58 aa2.22□□□□□ -2.05
CCDC171-207ENST00000478913 MT2AP02795 61 aa2.22□□□□□ -2.05
CCDC171-207ENST00000478913 COX7BP24311 80 aa2.22□□□□□ -2.05
CCDC171-207ENST00000478913 LINC00575Q6W349 94 aa2.22□□□□□ -2.05
CCDC171-207ENST00000478913 Q6ZQT0 140 aa2.22□□□□□ -2.05
CCDC171-207ENST00000478913 TMEM254Q8TBM7 123 aa2.22□□□□□ -2.05
CCDC171-207ENST00000478913 NOP10Q9NPE3 64 aaKnown RBP2.22□□□□□ -2.05
CCDC171-207ENST00000478913 MT1FP04733 61 aa2.21□□□□□ -2.06
CCDC171-207ENST00000478913 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
CCDC171-207ENST00000478913 Q6ZTI0 123 aa2.21□□□□□ -2.06
CCDC171-207ENST00000478913 SNURFQ9Y675 71 aa2.21□□□□□ -2.06
CCDC171-207ENST00000478913 A8MUN3 132 aa2.2□□□□□ -2.06
CCDC171-207ENST00000478913 MT4P47944 62 aa2.2□□□□□ -2.06
CCDC171-207ENST00000478913 LCA10Q71F78 164 aa2.2□□□□□ -2.06
CCDC171-207ENST00000478913 C22orf24Q9Y442 160 aa2.2□□□□□ -2.06
CCDC171-207ENST00000478913 M0R378 163 aa2.19□□□□□ -2.06
CCDC171-207ENST00000478913 ANGP03950 147 aaKnown RBP2.19□□□□□ -2.06
CCDC171-207ENST00000478913 LINC00313P59037 77 aa2.19□□□□□ -2.06
CCDC171-207ENST00000478913 UBE2BP63146 152 aa2.19□□□□□ -2.06
CCDC171-207ENST00000478913 SPAG11BQ08648 103 aa2.19□□□□□ -2.06
CCDC171-207ENST00000478913 Q6ZQY7 126 aa2.19□□□□□ -2.06
CCDC171-207ENST00000478913 PHF5AQ7RTV0 110 aaKnown RBP2.19□□□□□ -2.06
CCDC171-207ENST00000478913 PRO0255Q9UI72 69 aa2.19□□□□□ -2.06
CCDC171-207ENST00000478913 TRBV7-4A0A0J9YYF1 115 aa2.18□□□□□ -2.06
CCDC171-207ENST00000478913 ZNF73O43830 326 aaPredicted RBP2.18□□□□□ -2.06
CCDC171-207ENST00000478913 PRM2P04554 102 aa2.18□□□□□ -2.06
CCDC171-207ENST00000478913 CYSTM1Q9H1C7 97 aa2.18□□□□□ -2.06
CCDC171-207ENST00000478913 A0A096LPF7 62 aa2.17□□□□□ -2.06
CCDC171-207ENST00000478913 ETDCA0A1B0GVM5 59 aa2.17□□□□□ -2.06
CCDC171-207ENST00000478913 Q1T7F1 81 aa2.17□□□□□ -2.06
CCDC171-207ENST00000478913 WFDC10BQ8IUB3 73 aa2.17□□□□□ -2.06
CCDC171-207ENST00000478913 LINC00269Q8N2A0 174 aa2.17□□□□□ -2.06
CCDC171-207ENST00000478913 GVQW2A0A096LPI5 108 aaPredicted RBP2.16□□□□□ -2.06
CCDC171-207ENST00000478913 hDV103S1A0JD37 113 aa2.16□□□□□ -2.06
CCDC171-207ENST00000478913 H3BPC8 53 aa2.16□□□□□ -2.06
CCDC171-207ENST00000478913 ELOF1P60002 83 aaKnown RBP2.16□□□□□ -2.06
CCDC171-207ENST00000478913 CLPSL2Q6UWE3 100 aa2.16□□□□□ -2.06
CCDC171-207ENST00000478913 FP248Q71RG6 208 aaPredicted RBP2.16□□□□□ -2.06
CCDC171-207ENST00000478913 LIMD2Q9BT23 127 aa2.16□□□□□ -2.06
CCDC171-207ENST00000478913 ZNF706Q9Y5V0 76 aaPredicted RBP2.16□□□□□ -2.06
CCDC171-207ENST00000478913 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
CCDC171-207ENST00000478913 CYP4F30PQ9H0H9 118 aa2.15□□□□□ -2.07
CCDC171-207ENST00000478913 LINC00474Q9P2X8 69 aa2.15□□□□□ -2.07
CCDC171-207ENST00000478913 IGLV10-54A0A075B6I4 117 aa2.14□□□□□ -2.07
CCDC171-207ENST00000478913 UNQ6190/PRO20217Q6UXQ8 127 aa2.14□□□□□ -2.07
CCDC171-207ENST00000478913 HIGD2AQ9BW72 106 aa2.14□□□□□ -2.07
CCDC171-207ENST00000478913 A6NN06 94 aa2.13□□□□□ -2.07
CCDC171-207ENST00000478913 HCG22E2RYF7 251 aa2.13□□□□□ -2.07
CCDC171-207ENST00000478913 CHKB-CPT1BH3BT56 60 aa2.13□□□□□ -2.07
CCDC171-207ENST00000478913 LINC01554Q52M75 96 aa2.13□□□□□ -2.07
CCDC171-207ENST00000478913 C9orf116Q5BN46 136 aaPredicted RBP2.13□□□□□ -2.07
CCDC171-207ENST00000478913 DEFB105AQ8NG35 78 aa2.13□□□□□ -2.07
CCDC171-207ENST00000478913 A6NED7 52 aa2.12□□□□□ -2.07
CCDC171-207ENST00000478913 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
CCDC171-207ENST00000478913 KRTAP25-1Q3LHN0 102 aa2.12□□□□□ -2.07
CCDC171-207ENST00000478913 C1orf137Q5JT78 98 aa2.12□□□□□ -2.07
CCDC171-207ENST00000478913 ATP11AUNQ6ZP68 121 aa2.12□□□□□ -2.07
CCDC171-207ENST00000478913 C7orf65Q6ZTY9 151 aa2.12□□□□□ -2.07
CCDC171-207ENST00000478913 LINC00208Q96KT6 92 aa2.12□□□□□ -2.07
CCDC171-207ENST00000478913 XAGE1AQ9HD64 81 aa2.12□□□□□ -2.07
CCDC171-207ENST00000478913 IGLV5-48A0A075B6I7 105 aa2.11□□□□□ -2.07
CCDC171-207ENST00000478913 TRAV22A0A0B4J277 110 aa2.11□□□□□ -2.07
CCDC171-207ENST00000478913 SPTSSBQ8NFR3 76 aa2.11□□□□□ -2.07
CCDC171-207ENST00000478913 PRR15LQ9BU68 103 aa2.11□□□□□ -2.07
CCDC171-207ENST00000478913 C6orf48Q9UBA6 75 aa2.11□□□□□ -2.07
CCDC171-207ENST00000478913 H3BNG1 76 aa2.1□□□□□ -2.07
CCDC171-207ENST00000478913 Q9BRP9 147 aa2.1□□□□□ -2.07
CCDC171-207ENST00000478913 KCNQ1DNQ9H478 68 aa2.1□□□□□ -2.07
CCDC171-207ENST00000478913 H0Y9P7 68 aa2.09□□□□□ -2.07
CCDC171-207ENST00000478913 K7ERS5 55 aa2.09□□□□□ -2.07
CCDC171-207ENST00000478913 FAM229BQ4G0N7 80 aa2.09□□□□□ -2.07
CCDC171-207ENST00000478913 CASC2Q6XLA1 102 aa2.09□□□□□ -2.07
CCDC171-207ENST00000478913 Q6ZRX8 168 aa2.09□□□□□ -2.07
CCDC171-207ENST00000478913 TP53AIP1Q9HCN2 124 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms