RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 S4R3F8 94 aa1.58□□□□□ -2.16
VPS50-214ENST00000477935 K7EQZ3 153 aa1.57□□□□□ -2.16
VPS50-214ENST00000477935 SNCGO76070 127 aa1.57□□□□□ -2.16
VPS50-214ENST00000477935 DPM2O94777 84 aa1.57□□□□□ -2.16
VPS50-214ENST00000477935 IFITM1P13164 125 aa1.57□□□□□ -2.16
VPS50-214ENST00000477935 S100PP25815 95 aa1.57□□□□□ -2.16
VPS50-214ENST00000477935 KRTAP12-1P59990 96 aa1.57□□□□□ -2.16
VPS50-214ENST00000477935 C2orf91Q6ZV80 131 aa1.57□□□□□ -2.16
VPS50-214ENST00000477935 CHCHD1Q96BP2 118 aaKnown RBP1.57□□□□□ -2.16
VPS50-214ENST00000477935 A8MUN3 132 aa1.56□□□□□ -2.16
VPS50-214ENST00000477935 H3BMG7 143 aa1.56□□□□□ -2.16
VPS50-214ENST00000477935 J3KT08 172 aa1.56□□□□□ -2.16
VPS50-214ENST00000477935 NDUFB1O75438 58 aa1.56□□□□□ -2.16
VPS50-214ENST00000477935 IGKCP01834 107 aa1.56□□□□□ -2.16
VPS50-214ENST00000477935 ANAPC13Q9BS18 74 aa1.56□□□□□ -2.16
VPS50-214ENST00000477935 HSPB8Q9UJY1 196 aa1.56□□□□□ -2.16
VPS50-214ENST00000477935 C7orf65Q6ZTY9 151 aa1.55□□□□□ -2.16
VPS50-214ENST00000477935 SCGB1C2P0DMR2 95 aa1.54□□□□□ -2.16
VPS50-214ENST00000477935 MT1GP13640 62 aa1.54□□□□□ -2.16
VPS50-214ENST00000477935 C4orf26Q17RF5 130 aa1.54□□□□□ -2.16
VPS50-214ENST00000477935 KRTAP20-2Q3LI61 65 aa1.54□□□□□ -2.16
VPS50-214ENST00000477935 BVES-AS1Q5T3Y7 98 aa1.54□□□□□ -2.16
VPS50-214ENST00000477935 H0YAA0 97 aa1.53□□□□□ -2.16
VPS50-214ENST00000477935 LEPROTL1O95214 131 aa1.53□□□□□ -2.16
VPS50-214ENST00000477935 ANKRD29Q8N6D5 301 aa1.53□□□□□ -2.16
VPS50-214ENST00000477935 TRACP01848 142 aa1.51□□□□□ -2.17
VPS50-214ENST00000477935 MT1EP04732 61 aa1.51□□□□□ -2.17
VPS50-214ENST00000477935 SCGB1D4Q6XE38 83 aa1.51□□□□□ -2.17
VPS50-214ENST00000477935 MUSTN1Q8IVN3 82 aa1.51□□□□□ -2.17
VPS50-214ENST00000477935 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
VPS50-214ENST00000477935 CCKP06307 115 aa1.49□□□□□ -2.17
VPS50-214ENST00000477935 FABP2P12104 132 aa1.49□□□□□ -2.17
VPS50-214ENST00000477935 MRPL34Q9BQ48 92 aaKnown RBP1.49□□□□□ -2.17
VPS50-214ENST00000477935 PMCHL2Q9BQD1 86 aa1.49□□□□□ -2.17
VPS50-214ENST00000477935 H0YGX0 51 aa1.48□□□□□ -2.17
VPS50-214ENST00000477935 TMEM254Q8TBM7 123 aa1.48□□□□□ -2.17
VPS50-214ENST00000477935 A0A1B0GX51 115 aa1.47□□□□□ -2.17
VPS50-214ENST00000477935 hDV103S1A0JD37 113 aa1.47□□□□□ -2.17
VPS50-214ENST00000477935 MT1MQ8N339 61 aa1.46□□□□□ -2.18
VPS50-214ENST00000477935 FABP4P15090 132 aa1.45□□□□□ -2.18
VPS50-214ENST00000477935 TTTY13Q9BZ97 58 aa1.45□□□□□ -2.18
VPS50-214ENST00000477935 SYNE1Q8NF91 8797 aaKnown RBP1.45□□□□□ -2.18
VPS50-214ENST00000477935 TMEM256-PLSCR3K7ERE1 68 aa1.43□□□□□ -2.18
VPS50-214ENST00000477935 MP68P56378 58 aa1.43□□□□□ -2.18
VPS50-214ENST00000477935 Q6ZQT0 140 aa1.43□□□□□ -2.18
VPS50-214ENST00000477935 A0A1B0GW54 56 aa1.42□□□□□ -2.18
VPS50-214ENST00000477935 TMEM218A2RU14 115 aa1.42□□□□□ -2.18
VPS50-214ENST00000477935 HCG22E2RYF7 251 aa1.42□□□□□ -2.18
VPS50-214ENST00000477935 SYS1-DBNDD2H3BUS1 97 aa1.42□□□□□ -2.18
VPS50-214ENST00000477935 NDUFC1O43677 76 aa1.42□□□□□ -2.18
VPS50-214ENST00000477935 C20orf197Q8N268 126 aa1.42□□□□□ -2.18
VPS50-214ENST00000477935 NAA38Q9BRA0 125 aaKnown RBP1.42□□□□□ -2.18
VPS50-214ENST00000477935 VPS25Q9BRG1 176 aa1.42□□□□□ -2.18
VPS50-214ENST00000477935 MMP24-AS1A0A0U1RRL7 71 aa1.41□□□□□ -2.18
VPS50-214ENST00000477935 LINC01545Q5VT33 79 aa1.41□□□□□ -2.18
VPS50-214ENST00000477935 ORMDL1Q9P0S3 153 aa1.41□□□□□ -2.18
VPS50-214ENST00000477935 M0QZ58 72 aa1.4□□□□□ -2.19
VPS50-214ENST00000477935 A0A1B0GV72 72 aa1.39□□□□□ -2.19
VPS50-214ENST00000477935 DNAL4O96015 105 aa1.39□□□□□ -2.19
VPS50-214ENST00000477935 LINC01554Q52M75 96 aa1.39□□□□□ -2.19
VPS50-214ENST00000477935 C9JAW5 83 aa1.38□□□□□ -2.19
VPS50-214ENST00000477935 MT1LQ93083 61 aa1.37□□□□□ -2.19
VPS50-214ENST00000477935 KRTAP19-5Q3LI72 72 aa1.36□□□□□ -2.19
VPS50-214ENST00000477935 A0A087WVE0 104 aa1.35□□□□□ -2.19
VPS50-214ENST00000477935 NREPQ16612 68 aa1.35□□□□□ -2.19
VPS50-214ENST00000477935 BATFQ16520 125 aa1.34□□□□□ -2.19
VPS50-214ENST00000477935 CLLU1Q5K131 121 aa1.34□□□□□ -2.19
VPS50-214ENST00000477935 CASC2Q6XLA1 102 aa1.33□□□□□ -2.2
VPS50-214ENST00000477935 MT-ATP8P03928 68 aa1.32□□□□□ -2.2
VPS50-214ENST00000477935 KRTDAPP60985 99 aa1.32□□□□□ -2.2
VPS50-214ENST00000477935 A0A0D9SG42 100 aa1.31□□□□□ -2.2
VPS50-214ENST00000477935 COX6CP09669 75 aa1.31□□□□□ -2.2
VPS50-214ENST00000477935 SVBPQ8N300 66 aa1.31□□□□□ -2.2
VPS50-214ENST00000477935 LOC110117498A0A087WWA1 95 aa1.3□□□□□ -2.2
VPS50-214ENST00000477935 JMJD7-PLA2G4BH0Y9G9 81 aa1.3□□□□□ -2.2
VPS50-214ENST00000477935 ACYP1P07311 99 aa1.3□□□□□ -2.2
VPS50-214ENST00000477935 NDUFA5Q16718 116 aa1.3□□□□□ -2.2
VPS50-214ENST00000477935 TP53AIP1Q9HCN2 124 aa1.3□□□□□ -2.2
VPS50-214ENST00000477935 PRO1854Q9UHT4 67 aa1.3□□□□□ -2.2
VPS50-214ENST00000477935 A0A1W2PPM0 123 aa1.29□□□□□ -2.2
VPS50-214ENST00000477935 APOC3P02656 99 aa1.29□□□□□ -2.2
VPS50-214ENST00000477935 ATOH7Q8N100 152 aa1.29□□□□□ -2.2
VPS50-214ENST00000477935 HIST3H2BBQ8N257 126 aa1.29□□□□□ -2.2
VPS50-214ENST00000477935 CYP4F30PQ9H0H9 118 aa1.29□□□□□ -2.2
VPS50-214ENST00000477935 HSBP1L1C9JCN9 74 aa1.28□□□□□ -2.2
VPS50-214ENST00000477935 BAALC-AS2P0C853 105 aa1.27□□□□□ -2.21
VPS50-214ENST00000477935 HIST1H2BLQ99880 126 aa1.27□□□□□ -2.21
VPS50-214ENST00000477935 HIGD1BQ9P298 99 aa1.26□□□□□ -2.21
VPS50-214ENST00000477935 TRAV22A0A0B4J277 110 aa1.25□□□□□ -2.21
VPS50-214ENST00000477935 LOC101927531A0A1B0GV80 90 aa1.24□□□□□ -2.21
VPS50-214ENST00000477935 DLEU1O43261 78 aa1.24□□□□□ -2.21
VPS50-214ENST00000477935 HIST1H2BKO60814 126 aa1.23□□□□□ -2.21
VPS50-214ENST00000477935 HIST1H2BJP06899 126 aa1.23□□□□□ -2.21
VPS50-214ENST00000477935 HIST1H2BOP23527 126 aa1.23□□□□□ -2.21
VPS50-214ENST00000477935 HIST1H2BBP33778 126 aa1.23□□□□□ -2.21
VPS50-214ENST00000477935 HIST1H2BDP58876 126 aa1.23□□□□□ -2.21
VPS50-214ENST00000477935 HIST1H2BCP62807 126 aa1.23□□□□□ -2.21
VPS50-214ENST00000477935 HIST2H2BEQ16778 126 aa1.23□□□□□ -2.21
VPS50-214ENST00000477935 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.23□□□□□ -2.21
VPS50-214ENST00000477935 HIST1H2BHQ93079 126 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms