RNA–Protein interactions for RNA: ENST00000476539.5

SUPT20H-214, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 528 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-214ENST00000476539 DEFB135Q30KP9 77 aa1.34□□□□□ -2.19
SUPT20H-214ENST00000476539 LINC01556Q5JQF7 62 aa1.34□□□□□ -2.19
SUPT20H-214ENST00000476539 CSAG1Q6PB30 78 aa1.34□□□□□ -2.19
SUPT20H-214ENST00000476539 HMCN1Q96RW7 5635 aa1.34□□□□□ -2.19
SUPT20H-214ENST00000476539 ZNF469Q96JG9 3925 aaPredicted RBP1.34□□□□□ -2.2
SUPT20H-214ENST00000476539 DNHD1Q96M86 4753 aa1.34□□□□□ -2.2
SUPT20H-214ENST00000476539 ANK2Q01484 3957 aa1.33□□□□□ -2.2
SUPT20H-214ENST00000476539 MMP24-AS1A0A0U1RRL7 71 aa1.33□□□□□ -2.2
SUPT20H-214ENST00000476539 RPL37AP61513 92 aaKnown RBP1.33□□□□□ -2.2
SUPT20H-214ENST00000476539 SPTSSBQ8NFR3 76 aa1.33□□□□□ -2.2
SUPT20H-214ENST00000476539 DEFB105AQ8NG35 78 aa1.33□□□□□ -2.2
SUPT20H-214ENST00000476539 NBEAL2Q6ZNJ1 2754 aa1.33□□□□□ -2.2
SUPT20H-214ENST00000476539 DNAH1Q9P2D7 4330 aa1.33□□□□□ -2.2
SUPT20H-214ENST00000476539 CUBNO60494 3623 aa1.33□□□□□ -2.2
SUPT20H-214ENST00000476539 ANK3Q12955 4377 aaKnown RBP1.32□□□□□ -2.2
SUPT20H-214ENST00000476539 VWFP04275 2813 aa1.32□□□□□ -2.2
SUPT20H-214ENST00000476539 SPINK7P58062 85 aa1.32□□□□□ -2.2
SUPT20H-214ENST00000476539 SPATA8Q6RVD6 105 aa1.32□□□□□ -2.2
SUPT20H-214ENST00000476539 WFDC10BQ8IUB3 73 aa1.32□□□□□ -2.2
SUPT20H-214ENST00000476539 WFDC13Q8IUB5 93 aa1.32□□□□□ -2.2
SUPT20H-214ENST00000476539 NOTCH1P46531 2555 aa1.32□□□□□ -2.2
SUPT20H-214ENST00000476539 ALMS1Q8TCU4 4167 aa1.31□□□□□ -2.2
SUPT20H-214ENST00000476539 Q96NJ1 140 aa1.31□□□□□ -2.2
SUPT20H-214ENST00000476539 SPAG11AQ6PDA7 123 aa1.3□□□□□ -2.2
SUPT20H-214ENST00000476539 DMAC1Q96GE9 116 aa1.3□□□□□ -2.2
SUPT20H-214ENST00000476539 MGAM2Q2M2H8 2515 aa1.29□□□□□ -2.2
SUPT20H-214ENST00000476539 DEFB4AO15263 64 aa1.29□□□□□ -2.2
SUPT20H-214ENST00000476539 ACYP2P14621 99 aa1.29□□□□□ -2.2
SUPT20H-214ENST00000476539 NBDYA0A0U1RRE5 68 aa1.28□□□□□ -2.2
SUPT20H-214ENST00000476539 MRPL34Q9BQ48 92 aaKnown RBP1.28□□□□□ -2.2
SUPT20H-214ENST00000476539 APLNQ9ULZ1 77 aa1.28□□□□□ -2.2
SUPT20H-214ENST00000476539 TRRAPQ9Y4A5 3859 aa1.27□□□□□ -2.21
SUPT20H-214ENST00000476539 A0A096LNI7 61 aa1.27□□□□□ -2.21
SUPT20H-214ENST00000476539 UQCR11O14957 56 aa1.27□□□□□ -2.21
SUPT20H-214ENST00000476539 KRTAP10-4P60372 401 aaPredicted RBP1.27□□□□□ -2.21
SUPT20H-214ENST00000476539 PRLHP81277 87 aa1.27□□□□□ -2.21
SUPT20H-214ENST00000476539 Q5VSD8 79 aa1.26□□□□□ -2.21
SUPT20H-214ENST00000476539 COL7A1Q02388 2944 aa1.26□□□□□ -2.21
SUPT20H-214ENST00000476539 DNAH3Q8TD57 4116 aa1.26□□□□□ -2.21
SUPT20H-214ENST00000476539 DYNC2H1Q8NCM8 4307 aaKnown RBP1.26□□□□□ -2.21
SUPT20H-214ENST00000476539 A0A1B0GU69 56 aa1.25□□□□□ -2.21
SUPT20H-214ENST00000476539 TENM2Q9NT68 2774 aa1.25□□□□□ -2.21
SUPT20H-214ENST00000476539 SRRM2Q9UQ35 2752 aaKnown RBP1.25□□□□□ -2.21
SUPT20H-214ENST00000476539 TENM3Q9P273 2699 aa1.25□□□□□ -2.21
SUPT20H-214ENST00000476539 SMR3BP02814 79 aaPredicted RBP1.24□□□□□ -2.21
SUPT20H-214ENST00000476539 DNAH8Q96JB1 4490 aa1.24□□□□□ -2.21
SUPT20H-214ENST00000476539 DNAH17Q9UFH2 4485 aa1.24□□□□□ -2.21
SUPT20H-214ENST00000476539 CMYA5Q8N3K9 4069 aa1.23□□□□□ -2.21
SUPT20H-214ENST00000476539 DNAH10Q8IVF4 4471 aa1.23□□□□□ -2.21
SUPT20H-214ENST00000476539 SSBP3-AS1Q7Z2R9 100 aa1.23□□□□□ -2.21
SUPT20H-214ENST00000476539 A0A087WTM6 91 aa1.22□□□□□ -2.21
SUPT20H-214ENST00000476539 VPS13DQ5THJ4 4388 aa1.22□□□□□ -2.21
SUPT20H-214ENST00000476539 HUWE1Q7Z6Z7 4374 aaKnown RBP1.22□□□□□ -2.21
SUPT20H-214ENST00000476539 STAB2Q8WWQ8 2551 aa1.21□□□□□ -2.22
SUPT20H-214ENST00000476539 PRKDCP78527 4128 aaKnown RBP1.21□□□□□ -2.22
SUPT20H-214ENST00000476539 DNAH9Q9NYC9 4486 aa1.21□□□□□ -2.22
SUPT20H-214ENST00000476539 H0YAA0 97 aa1.2□□□□□ -2.22
SUPT20H-214ENST00000476539 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
SUPT20H-214ENST00000476539 LYSTQ99698 3801 aa1.19□□□□□ -2.22
SUPT20H-214ENST00000476539 DNAH2Q9P225 4427 aa1.19□□□□□ -2.22
SUPT20H-214ENST00000476539 KMT2CQ8NEZ4 4911 aaKnown RBP1.19□□□□□ -2.22
SUPT20H-214ENST00000476539 H1FX-AS1Q4G0G2 97 aa1.18□□□□□ -2.22
SUPT20H-214ENST00000476539 SPINK6Q6UWN8 80 aa1.18□□□□□ -2.22
SUPT20H-214ENST00000476539 COX6B2Q6YFQ2 88 aa1.18□□□□□ -2.22
SUPT20H-214ENST00000476539 RYR3Q15413 4870 aa1.18□□□□□ -2.22
SUPT20H-214ENST00000476539 SACSQ9NZJ4 4579 aa1.18□□□□□ -2.22
SUPT20H-214ENST00000476539 DNAH6Q9C0G6 4158 aa1.18□□□□□ -2.22
SUPT20H-214ENST00000476539 HECTD4Q9Y4D8 3996 aa1.17□□□□□ -2.22
SUPT20H-214ENST00000476539 DNAH11Q96DT5 4516 aa1.17□□□□□ -2.22
SUPT20H-214ENST00000476539 BIRC6Q9NR09 4857 aa1.17□□□□□ -2.22
SUPT20H-214ENST00000476539 RPS29P62273 56 aaKnown RBP1.17□□□□□ -2.22
SUPT20H-214ENST00000476539 DNAH7Q8WXX0 4024 aa1.16□□□□□ -2.22
SUPT20H-214ENST00000476539 PLECQ15149 4684 aaKnown RBP1.16□□□□□ -2.22
SUPT20H-214ENST00000476539 FRAS1Q86XX4 4008 aa1.15□□□□□ -2.23
SUPT20H-214ENST00000476539 LRP1BQ9NZR2 4599 aa1.14□□□□□ -2.23
SUPT20H-214ENST00000476539 RYR2Q92736 4967 aa1.14□□□□□ -2.23
SUPT20H-214ENST00000476539 SPINK1P00995 79 aa1.14□□□□□ -2.23
SUPT20H-214ENST00000476539 RPL37P61927 97 aaKnown RBP1.14□□□□□ -2.23
SUPT20H-214ENST00000476539 EPPK1P58107 5090 aaKnown RBP1.14□□□□□ -2.23
SUPT20H-214ENST00000476539 CSMD3Q7Z407 3707 aa1.13□□□□□ -2.23
SUPT20H-214ENST00000476539 M0R2T5 61 aa1.13□□□□□ -2.23
SUPT20H-214ENST00000476539 CRCT1Q9UGL9 99 aa1.13□□□□□ -2.23
SUPT20H-214ENST00000476539 PKHD1L1Q86WI1 4243 aa1.12□□□□□ -2.23
SUPT20H-214ENST00000476539 HYDINQ4G0P3 5121 aa1.12□□□□□ -2.23
SUPT20H-214ENST00000476539 DNAH5Q8TE73 4624 aa1.12□□□□□ -2.23
SUPT20H-214ENST00000476539 STARD9Q9P2P6 4700 aa1.12□□□□□ -2.23
SUPT20H-214ENST00000476539 HERC2O95714 4834 aa1.1□□□□□ -2.23
SUPT20H-214ENST00000476539 PKD1P98161 4303 aa1.1□□□□□ -2.23
SUPT20H-214ENST00000476539 CRIPTQ9P021 101 aa1.1□□□□□ -2.23
SUPT20H-214ENST00000476539 DMBT1Q9UGM3 2413 aaPredicted RBP1.1□□□□□ -2.23
SUPT20H-214ENST00000476539 S4R3F8 94 aa1.09□□□□□ -2.23
SUPT20H-214ENST00000476539 VPS13BQ7Z7G8 4022 aa1.09□□□□□ -2.23
SUPT20H-214ENST00000476539 RYR1P21817 5038 aa1.09□□□□□ -2.24
SUPT20H-214ENST00000476539 FAT2Q9NYQ8 4349 aa1.09□□□□□ -2.24
SUPT20H-214ENST00000476539 KMT2AQ03164 3969 aa1.09□□□□□ -2.24
SUPT20H-214ENST00000476539 PCLOQ9Y6V0 5065 aa1.09□□□□□ -2.24
SUPT20H-214ENST00000476539 M0QZ58 72 aa1.08□□□□□ -2.24
SUPT20H-214ENST00000476539 DYNC1H1Q14204 4646 aaKnown RBP1.08□□□□□ -2.24
SUPT20H-214ENST00000476539 APOBP04114 4563 aaKnown RBP1.07□□□□□ -2.24
SUPT20H-214ENST00000476539 LRP1Q07954 4544 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms