RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
HDAC3-207ENST00000475549 LOC105371267A0A1B0GV96 52 aa3.13□□□□□ -1.91
HDAC3-207ENST00000475549 A6NN06 94 aa3.13□□□□□ -1.91
HDAC3-207ENST00000475549 C1orf64Q8NEQ6 169 aa3.13□□□□□ -1.91
HDAC3-207ENST00000475549 SPCS1Q9Y6A9 102 aa3.13□□□□□ -1.91
HDAC3-207ENST00000475549 FAM236AA0A1B0GUQ0 79 aa3.12□□□□□ -1.91
HDAC3-207ENST00000475549 FAM236BA0A1B0GV22 79 aa3.12□□□□□ -1.91
HDAC3-207ENST00000475549 CSAG1Q6PB30 78 aa3.12□□□□□ -1.91
HDAC3-207ENST00000475549 S4R3F8 94 aa3.12□□□□□ -1.91
HDAC3-207ENST00000475549 A0A087WVE0 104 aa3.11□□□□□ -1.91
HDAC3-207ENST00000475549 KRTAP10-5P60370 271 aa3.11□□□□□ -1.91
HDAC3-207ENST00000475549 Q5VV11 94 aa3.11□□□□□ -1.91
HDAC3-207ENST00000475549 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
HDAC3-207ENST00000475549 UBL5Q9BZL1 73 aa3.09□□□□□ -1.91
HDAC3-207ENST00000475549 KMT2DO14686 5537 aa3.09□□□□□ -1.92
HDAC3-207ENST00000475549 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
HDAC3-207ENST00000475549 KLKP1Q107X0 134 aa3.08□□□□□ -1.92
HDAC3-207ENST00000475549 K7EP34 96 aa3.06□□□□□ -1.92
HDAC3-207ENST00000475549 CYP4F30PQ9H0H9 118 aa3.06□□□□□ -1.92
HDAC3-207ENST00000475549 TP53AIP1Q9HCN2 124 aa3.06□□□□□ -1.92
HDAC3-207ENST00000475549 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
HDAC3-207ENST00000475549 COL5A1-AS1Q5SY13 56 aa3.04□□□□□ -1.92
HDAC3-207ENST00000475549 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
HDAC3-207ENST00000475549 CRIPTQ9P021 101 aa3.02□□□□□ -1.93
HDAC3-207ENST00000475549 ETDBQ3ZM63 59 aa3.01□□□□□ -1.93
HDAC3-207ENST00000475549 F8W1H4 67 aa2.99□□□□□ -1.93
HDAC3-207ENST00000475549 TRAV22A0A0B4J277 110 aa2.98□□□□□ -1.93
HDAC3-207ENST00000475549 LOC101927531A0A1B0GV80 90 aa2.98□□□□□ -1.93
HDAC3-207ENST00000475549 H0YAA0 97 aa2.98□□□□□ -1.93
HDAC3-207ENST00000475549 MT1XP80297 61 aa2.97□□□□□ -1.93
HDAC3-207ENST00000475549 GTF2H5Q6ZYL4 71 aa2.97□□□□□ -1.93
HDAC3-207ENST00000475549 IMUPQ9GZP8 106 aa2.97□□□□□ -1.93
HDAC3-207ENST00000475549 NDUFC1O43677 76 aa2.95□□□□□ -1.94
HDAC3-207ENST00000475549 ADM2Q7Z4H4 148 aa2.95□□□□□ -1.94
HDAC3-207ENST00000475549 UQCRQO14949 82 aa2.94□□□□□ -1.94
HDAC3-207ENST00000475549 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
HDAC3-207ENST00000475549 H0Y9P7 68 aa2.93□□□□□ -1.94
HDAC3-207ENST00000475549 KRTAP2-3P0C7H8 128 aa2.93□□□□□ -1.94
HDAC3-207ENST00000475549 KRTAP2-4Q9BYR9 128 aa2.93□□□□□ -1.94
HDAC3-207ENST00000475549 ACYP1P07311 99 aa2.92□□□□□ -1.94
HDAC3-207ENST00000475549 HIST1H4AP62805 103 aaKnown RBP2.92□□□□□ -1.94
HDAC3-207ENST00000475549 A8MUN3 132 aa2.91□□□□□ -1.94
HDAC3-207ENST00000475549 SPRR2EP22531 72 aa2.91□□□□□ -1.94
HDAC3-207ENST00000475549 SPRR2BP35325 72 aa2.91□□□□□ -1.94
HDAC3-207ENST00000475549 SPRR2AP35326 72 aa2.91□□□□□ -1.94
HDAC3-207ENST00000475549 FAM240AA0A1B0GVK7 77 aa2.9□□□□□ -1.95
HDAC3-207ENST00000475549 PCP4L1A6NKN8 68 aa2.9□□□□□ -1.95
HDAC3-207ENST00000475549 ATOX1O00244 68 aa2.9□□□□□ -1.95
HDAC3-207ENST00000475549 P0C880 135 aa2.9□□□□□ -1.95
HDAC3-207ENST00000475549 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.95
HDAC3-207ENST00000475549 PRO2289Q9P1D8 64 aa2.9□□□□□ -1.95
HDAC3-207ENST00000475549 ATP5EP2Q5VTU8 51 aa2.89□□□□□ -1.95
HDAC3-207ENST00000475549 KRTAP8-1Q8IUC2 63 aa2.89□□□□□ -1.95
HDAC3-207ENST00000475549 LINC00208Q96KT6 92 aa2.89□□□□□ -1.95
HDAC3-207ENST00000475549 KRTAP12-2P59991 146 aa2.88□□□□□ -1.95
HDAC3-207ENST00000475549 OCR1Q9BZK8 76 aa2.88□□□□□ -1.95
HDAC3-207ENST00000475549 PLAC4Q8WY50 150 aa2.87□□□□□ -1.95
HDAC3-207ENST00000475549 LINC00643Q86TS7 51 aa2.85□□□□□ -1.95
HDAC3-207ENST00000475549 R4GN34 69 aa2.85□□□□□ -1.95
HDAC3-207ENST00000475549 M0QZ58 72 aa2.84□□□□□ -1.95
HDAC3-207ENST00000475549 KRTAP10-7P60409 375 aaPredicted RBP2.84□□□□□ -1.95
HDAC3-207ENST00000475549 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.95
HDAC3-207ENST00000475549 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
HDAC3-207ENST00000475549 MP68P56378 58 aa2.82□□□□□ -1.96
HDAC3-207ENST00000475549 DMAC1Q96GE9 116 aa2.82□□□□□ -1.96
HDAC3-207ENST00000475549 SPRR2DP22532 72 aa2.81□□□□□ -1.96
HDAC3-207ENST00000475549 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
HDAC3-207ENST00000475549 PRAC1Q96KF2 57 aa2.81□□□□□ -1.96
HDAC3-207ENST00000475549 LINC01554Q52M75 96 aa2.8□□□□□ -1.96
HDAC3-207ENST00000475549 C20orf197Q8N268 126 aa2.79□□□□□ -1.96
HDAC3-207ENST00000475549 H3BPC8 53 aa2.77□□□□□ -1.97
HDAC3-207ENST00000475549 A0A1B0GV90 55 aa2.75□□□□□ -1.97
HDAC3-207ENST00000475549 TRAV7A0A075B6U4 112 aa2.73□□□□□ -1.97
HDAC3-207ENST00000475549 SCGB1A1P11684 91 aa2.72□□□□□ -1.97
HDAC3-207ENST00000475549 ACYP2P14621 99 aa2.7□□□□□ -1.98
HDAC3-207ENST00000475549 MT-ATP8P03928 68 aa2.69□□□□□ -1.98
HDAC3-207ENST00000475549 KRTAP13-4Q3LI77 160 aa2.69□□□□□ -1.98
HDAC3-207ENST00000475549 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
HDAC3-207ENST00000475549 J3QR89 54 aa2.66□□□□□ -1.98
HDAC3-207ENST00000475549 DSTQ03001 7570 aaKnown RBP2.64□□□□□ -1.99
HDAC3-207ENST00000475549 SPTSSBQ8NFR3 76 aa2.64□□□□□ -1.99
HDAC3-207ENST00000475549 MT1EP04732 61 aa2.63□□□□□ -1.99
HDAC3-207ENST00000475549 CHKB-CPT1BH3BT56 60 aa2.62□□□□□ -1.99
HDAC3-207ENST00000475549 SNURFQ9Y675 71 aa2.62□□□□□ -1.99
HDAC3-207ENST00000475549 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
HDAC3-207ENST00000475549 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
HDAC3-207ENST00000475549 KRTAP19-3Q7Z4W3 81 aa2.61□□□□□ -1.99
HDAC3-207ENST00000475549 CAMK2N1Q7Z7J9 78 aa2.6□□□□□ -1.99
HDAC3-207ENST00000475549 SMIM20Q8N5G0 67 aa2.6□□□□□ -1.99
HDAC3-207ENST00000475549 MT3P25713 68 aa2.59□□□□□ -1.99
HDAC3-207ENST00000475549 SPANXA2-OT1Q8N9U9 137 aa2.58□□□□□ -2
HDAC3-207ENST00000475549 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
HDAC3-207ENST00000475549 A0A0D9SG42 100 aa2.55□□□□□ -2
HDAC3-207ENST00000475549 SPATA8Q6RVD6 105 aa2.55□□□□□ -2
HDAC3-207ENST00000475549 MT1GP13640 62 aa2.54□□□□□ -2
HDAC3-207ENST00000475549 CYSTM1Q9H1C7 97 aa2.54□□□□□ -2
HDAC3-207ENST00000475549 K7ERU9 68 aa2.52□□□□□ -2.01
HDAC3-207ENST00000475549 KRTAP12-1P59990 96 aa2.52□□□□□ -2.01
HDAC3-207ENST00000475549 COA5Q86WW8 74 aa2.52□□□□□ -2.01
HDAC3-207ENST00000475549 SERP2Q8N6R1 65 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms