RNA–Protein interactions for RNA: ENST00000475318.1

POLR1B-212, Transcript of RNA polymerase I subunit B, humanhuman

TSL 3

Gene POLR1B, Length 680 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-212ENST00000475318 LINC00308Q8TCZ7 52 aa0.03□□□□□ -2.4
POLR1B-212ENST00000475318 CMC2Q9NRP2 79 aa0.03□□□□□ -2.4
POLR1B-212ENST00000475318 S4R3F8 94 aa0.03□□□□□ -2.4
POLR1B-212ENST00000475318 DNAH5Q8TE73 4624 aa0.03□□□□□ -2.41
POLR1B-212ENST00000475318 HERC1Q15751 4861 aa0.03□□□□□ -2.41
POLR1B-212ENST00000475318 FRYLO94915 3013 aa0.03□□□□□ -2.41
POLR1B-212ENST00000475318 SPINK4O60575 86 aa0.02□□□□□ -2.41
POLR1B-212ENST00000475318 SPRR2DP22532 72 aa0.02□□□□□ -2.41
POLR1B-212ENST00000475318 KRTAP6-2Q3LI66 62 aa0.02□□□□□ -2.41
POLR1B-212ENST00000475318 SPRR2GQ9BYE4 73 aa0.02□□□□□ -2.41
POLR1B-212ENST00000475318 NMES1Q9C002 83 aa0.02□□□□□ -2.41
POLR1B-212ENST00000475318 U3KQA8 63 aa0.02□□□□□ -2.41
POLR1B-212ENST00000475318 CMYA5Q8N3K9 4069 aa0.02□□□□□ -2.41
POLR1B-212ENST00000475318 CSMD2Q7Z408 3487 aa0.02□□□□□ -2.41
POLR1B-212ENST00000475318 PCLOQ9Y6V0 5065 aa0.02□□□□□ -2.41
POLR1B-212ENST00000475318 SSPOA2VEC9 5147 aa0.01□□□□□ -2.41
POLR1B-212ENST00000475318 CEP350Q5VT06 3117 aa0.01□□□□□ -2.41
POLR1B-212ENST00000475318 MKI67P46013 3256 aaKnown RBP0.01□□□□□ -2.41
POLR1B-212ENST00000475318 MUC17Q685J3 4493 aa0.01□□□□□ -2.41
POLR1B-212ENST00000475318 SPTAN1Q13813 2472 aaKnown RBP0.01□□□□□ -2.41
POLR1B-212ENST00000475318 H0YGX0 51 aa0.01□□□□□ -2.41
POLR1B-212ENST00000475318 M0R2T5 61 aa0.01□□□□□ -2.41
POLR1B-212ENST00000475318 RPL38P63173 70 aaKnown RBP0.01□□□□□ -2.41
POLR1B-212ENST00000475318 PRLHP81277 87 aa0.01□□□□□ -2.41
POLR1B-212ENST00000475318 MINOS1Q5TGZ0 78 aa0.01□□□□□ -2.41
POLR1B-212ENST00000475318 C6orf48Q9UBA6 75 aa0.01□□□□□ -2.41
POLR1B-212ENST00000475318 NIPBLQ6KC79 2804 aaeCLIP0.01□□□□□ -2.41
POLR1B-212ENST00000475318 MGAM2Q2M2H8 2515 aa0.01□□□□□ -2.41
POLR1B-212ENST00000475318 BOD1L1Q8NFC6 3051 aa0□□□□□ -2.41
POLR1B-212ENST00000475318 IGLV5-48A0A075B6I7 105 aa0□□□□□ -2.41
POLR1B-212ENST00000475318 MMP24-AS1A0A0U1RRL7 71 aa0□□□□□ -2.41
POLR1B-212ENST00000475318 MRPL33O75394 65 aaKnown RBP0□□□□□ -2.41
POLR1B-212ENST00000475318 TRPM2O94759 1503 aa0□□□□□ -2.41
POLR1B-212ENST00000475318 SPINK1P00995 79 aa0□□□□□ -2.41
POLR1B-212ENST00000475318 MT1AP04731 61 aa0□□□□□ -2.41
POLR1B-212ENST00000475318 SPRR2BP35325 72 aa0□□□□□ -2.41
POLR1B-212ENST00000475318 ATP7AQ04656 1500 aa0□□□□□ -2.41
POLR1B-212ENST00000475318 ITPR2Q14571 2701 aa0□□□□□ -2.41
POLR1B-212ENST00000475318 DEFB135Q30KP9 77 aa0□□□□□ -2.41
POLR1B-212ENST00000475318 KRTAP19-5Q3LI72 72 aa0□□□□□ -2.41
POLR1B-212ENST00000475318 ABRACLQ9P1F3 81 aa0□□□□□ -2.41
POLR1B-212ENST00000475318 TIMM8BQ9Y5J9 83 aaPredicted RBP0□□□□□ -2.41
POLR1B-212ENST00000475318 TRRAPQ9Y4A5 3859 aa-0□□□□□ -2.41
POLR1B-212ENST00000475318 LAMA2P24043 3122 aaKnown RBP-0□□□□□ -2.41
POLR1B-212ENST00000475318 TLN1Q9Y490 2541 aaKnown RBP-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 DMDP11532 3685 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 GCC2Q8IWJ2 1684 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 MUC3AQ02505 3323 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 KMT2CQ8NEZ4 4911 aaKnown RBP-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 UNC80Q8N2C7 3258 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 EP400Q96L91 3159 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 MROH2BQ7Z745 1585 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 DUOX1Q9NRD9 1551 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 SMR3BP02814 79 aaPredicted RBP-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 SPRR2EP22531 72 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 PLNP26678 52 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 CLPSL2Q6UWE3 100 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 WFDC10BQ8IUB3 73 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 DEFB106AQ8N104 65 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 TOMM5Q8N4H5 51 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 SMIM2Q9BVW6 85 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 TMEM167BQ9NRX6 74 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 KAAG1Q9UBP8 84 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 DCHS1Q96JQ0 3298 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 WDFY4Q6ZS81 3184 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 MACF1Q9UPN3 7388 aaKnown RBP-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 MUC2Q02817 5179 aa-0.01□□□□□ -2.41
POLR1B-212ENST00000475318 CEP250Q9BV73 2442 aa-0.02□□□□□ -2.41
POLR1B-212ENST00000475318 FREM2Q5SZK8 3169 aa-0.02□□□□□ -2.41
POLR1B-212ENST00000475318 SAMD9LQ8IVG5 1584 aa-0.02□□□□□ -2.41
POLR1B-212ENST00000475318 UBR4Q5T4S7 5183 aa-0.02□□□□□ -2.41
POLR1B-212ENST00000475318 NDUFA1O15239 70 aa-0.02□□□□□ -2.41
POLR1B-212ENST00000475318 SPRR2AP35326 72 aa-0.02□□□□□ -2.41
POLR1B-212ENST00000475318 SERF2P84101 59 aa-0.02□□□□□ -2.41
POLR1B-212ENST00000475318 KRTAP8-1Q8IUC2 63 aa-0.02□□□□□ -2.41
POLR1B-212ENST00000475318 SPRR2FQ96RM1 72 aa-0.02□□□□□ -2.41
POLR1B-212ENST00000475318 VPS13CQ709C8 3753 aa-0.02□□□□□ -2.41
POLR1B-212ENST00000475318 CFAP47Q6ZTR5 3102 aa-0.02□□□□□ -2.41
POLR1B-212ENST00000475318 MYO15AQ9UKN7 3530 aa-0.02□□□□□ -2.41
POLR1B-212ENST00000475318 MYO9AB2RTY4 2548 aa-0.03□□□□□ -2.41
POLR1B-212ENST00000475318 CENPEQ02224 2701 aa-0.03□□□□□ -2.41
POLR1B-212ENST00000475318 SZT2Q5T011 3432 aa-0.03□□□□□ -2.41
POLR1B-212ENST00000475318 H3BNG1 76 aa-0.03□□□□□ -2.41
POLR1B-212ENST00000475318 RYR1P21817 5038 aa-0.03□□□□□ -2.41
POLR1B-212ENST00000475318 XIRP2A4UGR9 3374 aa-0.03□□□□□ -2.41
POLR1B-212ENST00000475318 USH2AO75445 5202 aa-0.04□□□□□ -2.42
POLR1B-212ENST00000475318 ASPMQ8IZT6 3477 aa-0.04□□□□□ -2.42
POLR1B-212ENST00000475318 C9orf92A6NGG3 77 aa-0.04□□□□□ -2.42
POLR1B-212ENST00000475318 A8MTW9 85 aa-0.04□□□□□ -2.42
POLR1B-212ENST00000475318 H3BUA1 57 aa-0.04□□□□□ -2.42
POLR1B-212ENST00000475318 POLR2KP53803 58 aaKnown RBP-0.04□□□□□ -2.42
POLR1B-212ENST00000475318 RPL39P62891 51 aaKnown RBP-0.04□□□□□ -2.42
POLR1B-212ENST00000475318 KRTAP19-7Q3SYF9 63 aa-0.04□□□□□ -2.42
POLR1B-212ENST00000475318 PCNTO95613 3336 aa-0.04□□□□□ -2.42
POLR1B-212ENST00000475318 DNHD1Q96M86 4753 aa-0.05□□□□□ -2.42
POLR1B-212ENST00000475318 H0YGG7 62 aa-0.05□□□□□ -2.42
POLR1B-212ENST00000475318 M0QZ58 72 aa-0.05□□□□□ -2.42
POLR1B-212ENST00000475318 TNP1P09430 55 aa-0.05□□□□□ -2.42
POLR1B-212ENST00000475318 DEFB131AP59861 70 aa-0.05□□□□□ -2.42
POLR1B-212ENST00000475318 SNRPGP62308 76 aaKnown RBP-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms