RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 DNAH11Q96DT5 4516 aa4.68□□□□□ -1.66
CDH23-211ENST00000475158 DNAH1Q9P2D7 4330 aa4.67□□□□□ -1.66
CDH23-211ENST00000475158 KRTAP12-1P59990 96 aa4.66□□□□□ -1.66
CDH23-211ENST00000475158 PLECQ15149 4684 aaKnown RBP4.66□□□□□ -1.66
CDH23-211ENST00000475158 KRTAP4-5Q9BYR2 181 aa4.63□□□□□ -1.67
CDH23-211ENST00000475158 KRTAP10-6P60371 365 aaPredicted RBP4.63□□□□□ -1.67
CDH23-211ENST00000475158 MT1HL1P0DM35 61 aa4.63□□□□□ -1.67
CDH23-211ENST00000475158 DNAH5Q8TE73 4624 aa4.62□□□□□ -1.67
CDH23-211ENST00000475158 FAT1Q14517 4588 aa4.61□□□□□ -1.67
CDH23-211ENST00000475158 KRTAP10-4P60372 401 aaPredicted RBP4.59□□□□□ -1.68
CDH23-211ENST00000475158 DNAH17Q9UFH2 4485 aa4.53□□□□□ -1.68
CDH23-211ENST00000475158 DNAH8Q96JB1 4490 aa4.52□□□□□ -1.69
CDH23-211ENST00000475158 MYCBP2O75592 4640 aa4.52□□□□□ -1.69
CDH23-211ENST00000475158 PRKDCP78527 4128 aaKnown RBP4.51□□□□□ -1.69
CDH23-211ENST00000475158 STARD9Q9P2P6 4700 aa4.51□□□□□ -1.69
CDH23-211ENST00000475158 KMT2AQ03164 3969 aa4.5□□□□□ -1.69
CDH23-211ENST00000475158 RYR1P21817 5038 aa4.48□□□□□ -1.69
CDH23-211ENST00000475158 HECTD4Q9Y4D8 3996 aa4.47□□□□□ -1.69
CDH23-211ENST00000475158 LRP1BQ9NZR2 4599 aa4.46□□□□□ -1.7
CDH23-211ENST00000475158 ALMS1Q8TCU4 4167 aa4.45□□□□□ -1.7
CDH23-211ENST00000475158 DNAH6Q9C0G6 4158 aa4.44□□□□□ -1.7
CDH23-211ENST00000475158 KIAA1109Q2LD37 5005 aa4.43□□□□□ -1.7
CDH23-211ENST00000475158 DYNC1H1Q14204 4646 aaKnown RBP4.41□□□□□ -1.7
CDH23-211ENST00000475158 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
CDH23-211ENST00000475158 LCE2BO14633 110 aa4.4□□□□□ -1.7
CDH23-211ENST00000475158 FAT3Q8TDW7 4589 aa4.4□□□□□ -1.7
CDH23-211ENST00000475158 DNAH3Q8TD57 4116 aa4.39□□□□□ -1.71
CDH23-211ENST00000475158 VPS13DQ5THJ4 4388 aa4.38□□□□□ -1.71
CDH23-211ENST00000475158 DNAH2Q9P225 4427 aa4.38□□□□□ -1.71
CDH23-211ENST00000475158 LORP23490 312 aaPredicted RBP4.36□□□□□ -1.71
CDH23-211ENST00000475158 FAT2Q9NYQ8 4349 aa4.35□□□□□ -1.71
CDH23-211ENST00000475158 VPS13BQ7Z7G8 4022 aa4.33□□□□□ -1.72
CDH23-211ENST00000475158 SACSQ9NZJ4 4579 aa4.31□□□□□ -1.72
CDH23-211ENST00000475158 LRP1Q07954 4544 aaKnown RBP4.29□□□□□ -1.72
CDH23-211ENST00000475158 RYR3Q15413 4870 aa4.27□□□□□ -1.73
CDH23-211ENST00000475158 INE1O15225 51 aa4.26□□□□□ -1.73
CDH23-211ENST00000475158 HYDINQ4G0P3 5121 aa4.24□□□□□ -1.73
CDH23-211ENST00000475158 KRTAP4-1Q9BYQ7 146 aa4.23□□□□□ -1.73
CDH23-211ENST00000475158 APOBP04114 4563 aaKnown RBP4.22□□□□□ -1.73
CDH23-211ENST00000475158 LCE2CQ5TA81 110 aa4.22□□□□□ -1.73
CDH23-211ENST00000475158 PKHD1P08F94 4074 aa4.15□□□□□ -1.74
CDH23-211ENST00000475158 LRP2P98164 4655 aa4.15□□□□□ -1.75
CDH23-211ENST00000475158 KRTAP17-1Q9BYP8 105 aa4.14□□□□□ -1.75
CDH23-211ENST00000475158 DYNC2H1Q8NCM8 4307 aaKnown RBP4.14□□□□□ -1.75
CDH23-211ENST00000475158 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
CDH23-211ENST00000475158 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
CDH23-211ENST00000475158 CRCT1Q9UGL9 99 aa4.07□□□□□ -1.76
CDH23-211ENST00000475158 PKD1P98161 4303 aa4.06□□□□□ -1.76
CDH23-211ENST00000475158 LPAP08519 4548 aa4.04□□□□□ -1.76
CDH23-211ENST00000475158 HERC2O95714 4834 aa4.04□□□□□ -1.76
CDH23-211ENST00000475158 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
CDH23-211ENST00000475158 LCE2AQ5TA79 106 aaPredicted RBP4.02□□□□□ -1.77
CDH23-211ENST00000475158 HSPG2P98160 4391 aa4.02□□□□□ -1.77
CDH23-211ENST00000475158 KMT2CQ8NEZ4 4911 aaKnown RBP4□□□□□ -1.77
CDH23-211ENST00000475158 PCLOQ9Y6V0 5065 aa3.98□□□□□ -1.77
CDH23-211ENST00000475158 MT1HP80294 61 aa3.96□□□□□ -1.78
CDH23-211ENST00000475158 RYR2Q92736 4967 aa3.94□□□□□ -1.78
CDH23-211ENST00000475158 MT2AP02795 61 aa3.93□□□□□ -1.78
CDH23-211ENST00000475158 MT1FP04733 61 aa3.9□□□□□ -1.78
CDH23-211ENST00000475158 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
CDH23-211ENST00000475158 PKHD1L1Q86WI1 4243 aa3.87□□□□□ -1.79
CDH23-211ENST00000475158 EPPK1P58107 5090 aaKnown RBP3.84□□□□□ -1.8
CDH23-211ENST00000475158 SPRR2GQ9BYE4 73 aa3.83□□□□□ -1.8
CDH23-211ENST00000475158 FSIP2Q5CZC0 6907 aa3.83□□□□□ -1.8
CDH23-211ENST00000475158 KRTAP8-1Q8IUC2 63 aa3.76□□□□□ -1.81
CDH23-211ENST00000475158 KRTAP19-1Q8IUB9 90 aa3.76□□□□□ -1.81
CDH23-211ENST00000475158 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
CDH23-211ENST00000475158 MUC2Q02817 5179 aa3.72□□□□□ -1.81
CDH23-211ENST00000475158 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
CDH23-211ENST00000475158 UBR4Q5T4S7 5183 aa3.71□□□□□ -1.82
CDH23-211ENST00000475158 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
CDH23-211ENST00000475158 KRTAP10-5P60370 271 aa3.69□□□□□ -1.82
CDH23-211ENST00000475158 RNF213Q63HN8 5207 aa3.69□□□□□ -1.82
CDH23-211ENST00000475158 KRTAP19-5Q3LI72 72 aa3.69□□□□□ -1.82
CDH23-211ENST00000475158 TNXBP22105 4242 aa3.69□□□□□ -1.82
CDH23-211ENST00000475158 BIRC6Q9NR09 4857 aa3.68□□□□□ -1.82
CDH23-211ENST00000475158 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
CDH23-211ENST00000475158 HERC1Q15751 4861 aa3.67□□□□□ -1.82
CDH23-211ENST00000475158 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
CDH23-211ENST00000475158 FAT4Q6V0I7 4981 aa3.62□□□□□ -1.83
CDH23-211ENST00000475158 KRTAP9-8Q9BYQ0 159 aa3.6□□□□□ -1.83
CDH23-211ENST00000475158 MT1BP07438 61 aa3.58□□□□□ -1.84
CDH23-211ENST00000475158 MT1XP80297 61 aa3.58□□□□□ -1.84
CDH23-211ENST00000475158 KRTAP4-8A0A0G2JLE6 195 aa3.58□□□□□ -1.84
CDH23-211ENST00000475158 SPRR2FQ96RM1 72 aa3.58□□□□□ -1.84
CDH23-211ENST00000475158 KRTAP4-8Q9BYQ9 185 aa3.58□□□□□ -1.84
CDH23-211ENST00000475158 KRTAP19-8Q3LI54 63 aa3.56□□□□□ -1.84
CDH23-211ENST00000475158 MUC17Q685J3 4493 aa3.55□□□□□ -1.84
CDH23-211ENST00000475158 LCE3CQ5T5A8 94 aa3.54□□□□□ -1.84
CDH23-211ENST00000475158 KRTAP19-2Q3LHN2 52 aa3.52□□□□□ -1.85
CDH23-211ENST00000475158 KRTAP9-3Q9BYQ3 159 aa3.47□□□□□ -1.85
CDH23-211ENST00000475158 FLGP20930 4061 aaPredicted RBP3.44□□□□□ -1.86
CDH23-211ENST00000475158 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
CDH23-211ENST00000475158 KRTAP4-7Q9BYR0 210 aa3.4□□□□□ -1.86
CDH23-211ENST00000475158 MT1GP13640 62 aa3.38□□□□□ -1.87
CDH23-211ENST00000475158 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
CDH23-211ENST00000475158 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
CDH23-211ENST00000475158 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
CDH23-211ENST00000475158 FCGBPQ9Y6R7 5405 aaPredicted RBP3.32□□□□□ -1.88
CDH23-211ENST00000475158 USH2AO75445 5202 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms