RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 LRRK2Q5S007 2527 aa1.47□□□□□ -2.17
BRCA1-212ENST00000473961 CFAP46Q8IYW2 2715 aa1.47□□□□□ -2.17
BRCA1-212ENST00000473961 PKD1L2Q7Z442 2459 aa1.47□□□□□ -2.17
BRCA1-212ENST00000473961 TENM4Q6N022 2769 aa1.47□□□□□ -2.17
BRCA1-212ENST00000473961 ZNF292O60281 2723 aa1.47□□□□□ -2.17
BRCA1-212ENST00000473961 CENPEQ02224 2701 aa1.47□□□□□ -2.17
BRCA1-212ENST00000473961 TTC28Q96AY4 2481 aa1.46□□□□□ -2.18
BRCA1-212ENST00000473961 HIVEP1P15822 2718 aa1.46□□□□□ -2.18
BRCA1-212ENST00000473961 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
BRCA1-212ENST00000473961 BDP1A6H8Y1 2624 aa1.46□□□□□ -2.18
BRCA1-212ENST00000473961 MUC3AQ02505 3323 aa1.46□□□□□ -2.18
BRCA1-212ENST00000473961 CSMD2Q7Z408 3487 aa1.46□□□□□ -2.18
BRCA1-212ENST00000473961 ZANQ9Y493 2812 aa1.45□□□□□ -2.18
BRCA1-212ENST00000473961 ACACBO00763 2458 aa1.45□□□□□ -2.18
BRCA1-212ENST00000473961 HECTD1Q9ULT8 2610 aa1.45□□□□□ -2.18
BRCA1-212ENST00000473961 SETD2Q9BYW2 2564 aaPredicted RBP1.45□□□□□ -2.18
BRCA1-212ENST00000473961 ZNF462Q96JM2 2506 aa1.45□□□□□ -2.18
BRCA1-212ENST00000473961 MEGF8Q7Z7M0 2845 aa1.45□□□□□ -2.18
BRCA1-212ENST00000473961 HELZ2Q9BYK8 2649 aaKnown RBP1.45□□□□□ -2.18
BRCA1-212ENST00000473961 NIPBLQ6KC79 2804 aaeCLIP1.44□□□□□ -2.18
BRCA1-212ENST00000473961 COL6A5A8TX70 2615 aa1.44□□□□□ -2.18
BRCA1-212ENST00000473961 SMR3AQ99954 134 aa1.44□□□□□ -2.18
BRCA1-212ENST00000473961 DNAH1Q9P2D7 4330 aa1.44□□□□□ -2.18
BRCA1-212ENST00000473961 ANK3Q12955 4377 aaKnown RBP1.44□□□□□ -2.18
BRCA1-212ENST00000473961 VWFP04275 2813 aa1.44□□□□□ -2.18
BRCA1-212ENST00000473961 ABCA12Q86UK0 2595 aa1.43□□□□□ -2.18
BRCA1-212ENST00000473961 C9orf92A6NGG3 77 aa1.43□□□□□ -2.18
BRCA1-212ENST00000473961 ITPR3Q14573 2671 aa1.42□□□□□ -2.18
BRCA1-212ENST00000473961 TGP01266 2768 aa1.42□□□□□ -2.18
BRCA1-212ENST00000473961 ACANP16112 2415 aa1.41□□□□□ -2.18
BRCA1-212ENST00000473961 PDZD2O15018 2839 aa1.41□□□□□ -2.18
BRCA1-212ENST00000473961 PKD1L1Q8TDX9 2849 aa1.41□□□□□ -2.18
BRCA1-212ENST00000473961 POLQO75417 2590 aa1.41□□□□□ -2.18
BRCA1-212ENST00000473961 NBEAL1Q6ZS30 2694 aa1.4□□□□□ -2.19
BRCA1-212ENST00000473961 CUBNO60494 3623 aa1.4□□□□□ -2.19
BRCA1-212ENST00000473961 TRRAPQ9Y4A5 3859 aa1.4□□□□□ -2.19
BRCA1-212ENST00000473961 FASNP49327 2511 aaKnown RBP1.39□□□□□ -2.19
BRCA1-212ENST00000473961 TENM3Q9P273 2699 aa1.39□□□□□ -2.19
BRCA1-212ENST00000473961 FRAS1Q86XX4 4008 aa1.39□□□□□ -2.19
BRCA1-212ENST00000473961 FLNAP21333 2647 aaKnown RBP1.38□□□□□ -2.19
BRCA1-212ENST00000473961 CACNA1AO00555 2505 aa1.38□□□□□ -2.19
BRCA1-212ENST00000473961 MYO18BQ8IUG5 2567 aa1.38□□□□□ -2.19
BRCA1-212ENST00000473961 CSMD3Q7Z407 3707 aa1.38□□□□□ -2.19
BRCA1-212ENST00000473961 DMBT1Q9UGM3 2413 aaPredicted RBP1.38□□□□□ -2.19
BRCA1-212ENST00000473961 ANK2Q01484 3957 aa1.38□□□□□ -2.19
BRCA1-212ENST00000473961 VPS13DQ5THJ4 4388 aa1.37□□□□□ -2.19
BRCA1-212ENST00000473961 STAB2Q8WWQ8 2551 aa1.37□□□□□ -2.19
BRCA1-212ENST00000473961 FAM208BQ5VWN6 2430 aa1.36□□□□□ -2.19
BRCA1-212ENST00000473961 ITPR2Q14571 2701 aa1.36□□□□□ -2.19
BRCA1-212ENST00000473961 Q5VSD8 79 aa1.36□□□□□ -2.19
BRCA1-212ENST00000473961 DNAH3Q8TD57 4116 aa1.36□□□□□ -2.19
BRCA1-212ENST00000473961 MAST4O15021 2626 aa1.36□□□□□ -2.19
BRCA1-212ENST00000473961 COL7A1Q02388 2944 aa1.35□□□□□ -2.19
BRCA1-212ENST00000473961 LYSTQ99698 3801 aa1.35□□□□□ -2.19
BRCA1-212ENST00000473961 DNAH8Q96JB1 4490 aa1.35□□□□□ -2.19
BRCA1-212ENST00000473961 FLNCQ14315 2725 aa1.35□□□□□ -2.19
BRCA1-212ENST00000473961 TEP1Q99973 2627 aaKnown RBP1.35□□□□□ -2.19
BRCA1-212ENST00000473961 FLNBO75369 2602 aaKnown RBP1.34□□□□□ -2.19
BRCA1-212ENST00000473961 ATRQ13535 2644 aa1.33□□□□□ -2.2
BRCA1-212ENST00000473961 TNP1P09430 55 aa1.33□□□□□ -2.2
BRCA1-212ENST00000473961 FBN3Q75N90 2809 aa1.33□□□□□ -2.2
BRCA1-212ENST00000473961 NSD1Q96L73 2696 aaPredicted RBP1.33□□□□□ -2.2
BRCA1-212ENST00000473961 DNAH10Q8IVF4 4471 aa1.32□□□□□ -2.2
BRCA1-212ENST00000473961 IGSF10Q6WRI0 2623 aa1.32□□□□□ -2.2
BRCA1-212ENST00000473961 ZNF469Q96JG9 3925 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-212ENST00000473961 NOTCH1P46531 2555 aa1.32□□□□□ -2.2
BRCA1-212ENST00000473961 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
BRCA1-212ENST00000473961 CMYA5Q8N3K9 4069 aa1.31□□□□□ -2.2
BRCA1-212ENST00000473961 DYNC2H1Q8NCM8 4307 aaKnown RBP1.31□□□□□ -2.2
BRCA1-212ENST00000473961 DNAH7Q8WXX0 4024 aa1.31□□□□□ -2.2
BRCA1-212ENST00000473961 DNAH9Q9NYC9 4486 aa1.3□□□□□ -2.2
BRCA1-212ENST00000473961 DNAH17Q9UFH2 4485 aa1.3□□□□□ -2.2
BRCA1-212ENST00000473961 PRKDCP78527 4128 aaKnown RBP1.3□□□□□ -2.2
BRCA1-212ENST00000473961 DNAH6Q9C0G6 4158 aa1.3□□□□□ -2.2
BRCA1-212ENST00000473961 KRTAP10-4P60372 401 aaPredicted RBP1.29□□□□□ -2.2
BRCA1-212ENST00000473961 HECTD4Q9Y4D8 3996 aa1.29□□□□□ -2.2
BRCA1-212ENST00000473961 USP24Q9UPU5 2620 aa1.28□□□□□ -2.2
BRCA1-212ENST00000473961 MGAM2Q2M2H8 2515 aa1.28□□□□□ -2.2
BRCA1-212ENST00000473961 KMT2AQ03164 3969 aa1.28□□□□□ -2.21
BRCA1-212ENST00000473961 HUWE1Q7Z6Z7 4374 aaKnown RBP1.27□□□□□ -2.21
BRCA1-212ENST00000473961 DNAH11Q96DT5 4516 aa1.27□□□□□ -2.21
BRCA1-212ENST00000473961 STAB1Q9NY15 2570 aa1.26□□□□□ -2.21
BRCA1-212ENST00000473961 DNAH2Q9P225 4427 aa1.25□□□□□ -2.21
BRCA1-212ENST00000473961 MYCBP2O75592 4640 aa1.25□□□□□ -2.21
BRCA1-212ENST00000473961 SACSQ9NZJ4 4579 aa1.24□□□□□ -2.21
BRCA1-212ENST00000473961 SMR3BP02814 79 aaPredicted RBP1.23□□□□□ -2.21
BRCA1-212ENST00000473961 PLECQ15149 4684 aaKnown RBP1.2□□□□□ -2.22
BRCA1-212ENST00000473961 KRTAP8-1Q8IUC2 63 aa1.19□□□□□ -2.22
BRCA1-212ENST00000473961 PKHD1L1Q86WI1 4243 aa1.19□□□□□ -2.22
BRCA1-212ENST00000473961 LRP1Q07954 4544 aaKnown RBP1.19□□□□□ -2.22
BRCA1-212ENST00000473961 PKHD1P08F94 4074 aa1.19□□□□□ -2.22
BRCA1-212ENST00000473961 LRP1BQ9NZR2 4599 aa1.18□□□□□ -2.22
BRCA1-212ENST00000473961 VPS13BQ7Z7G8 4022 aa1.18□□□□□ -2.22
BRCA1-212ENST00000473961 DNAH5Q8TE73 4624 aa1.17□□□□□ -2.22
BRCA1-212ENST00000473961 APOBP04114 4563 aaKnown RBP1.16□□□□□ -2.22
BRCA1-212ENST00000473961 STARD9Q9P2P6 4700 aa1.16□□□□□ -2.22
BRCA1-212ENST00000473961 TNXBP22105 4242 aa1.15□□□□□ -2.22
BRCA1-212ENST00000473961 PKD1P98161 4303 aa1.15□□□□□ -2.22
BRCA1-212ENST00000473961 FAT2Q9NYQ8 4349 aa1.13□□□□□ -2.23
BRCA1-212ENST00000473961 FLGP20930 4061 aaPredicted RBP1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms