RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 PRR15LQ9BU68 103 aa0.7□□□□□ -2.3
CALD1-216ENST00000473714 CDC42SE2Q9NRR3 84 aa0.7□□□□□ -2.3
CALD1-216ENST00000473714 AP4S1Q9Y587 144 aa0.7□□□□□ -2.3
CALD1-216ENST00000473714 HCG22E2RYF7 251 aa0.69□□□□□ -2.3
CALD1-216ENST00000473714 H0YAA0 97 aa0.69□□□□□ -2.3
CALD1-216ENST00000473714 PPP1R17O96001 155 aa0.69□□□□□ -2.3
CALD1-216ENST00000473714 MT1EP04732 61 aa0.69□□□□□ -2.3
CALD1-216ENST00000473714 S100PP25815 95 aa0.69□□□□□ -2.3
CALD1-216ENST00000473714 KRTAP19-7Q3SYF9 63 aa0.69□□□□□ -2.3
CALD1-216ENST00000473714 MT1MQ8N339 61 aa0.69□□□□□ -2.3
CALD1-216ENST00000473714 Q96NJ1 140 aa0.69□□□□□ -2.3
CALD1-216ENST00000473714 ARL2-SNX15V9GYD0 113 aa0.69□□□□□ -2.3
CALD1-216ENST00000473714 PDCD5O14737 125 aa0.68□□□□□ -2.3
CALD1-216ENST00000473714 MGPP08493 103 aa0.68□□□□□ -2.3
CALD1-216ENST00000473714 GCHFRP30047 84 aa0.68□□□□□ -2.3
CALD1-216ENST00000473714 CRIP1P50238 77 aa0.68□□□□□ -2.3
CALD1-216ENST00000473714 Q8N8P6 123 aa0.68□□□□□ -2.3
CALD1-216ENST00000473714 SMIM11BQ8TCY0 68 aa0.68□□□□□ -2.3
CALD1-216ENST00000473714 TRAV1-2A0A0B4J238 106 aa0.67□□□□□ -2.3
CALD1-216ENST00000473714 SSSCA1O60232 199 aa0.67□□□□□ -2.3
CALD1-216ENST00000473714 SIX6O95475 246 aa0.67□□□□□ -2.3
CALD1-216ENST00000473714 IFITM1P13164 125 aa0.67□□□□□ -2.3
CALD1-216ENST00000473714 ATP5EP56381 51 aaPredicted RBP0.67□□□□□ -2.3
CALD1-216ENST00000473714 PSENENQ9NZ42 101 aa0.67□□□□□ -2.3
CALD1-216ENST00000473714 CTXND1A0A1B0GTU2 59 aa0.66□□□□□ -2.3
CALD1-216ENST00000473714 UBE2L5PA0A1B0GUS4 154 aa0.66□□□□□ -2.3
CALD1-216ENST00000473714 UBE2L3P68036 154 aaKnown RBP0.66□□□□□ -2.3
CALD1-216ENST00000473714 BAGE3Q86Y29 109 aa0.66□□□□□ -2.3
CALD1-216ENST00000473714 CYP4F30PQ9H0H9 118 aa0.66□□□□□ -2.3
CALD1-216ENST00000473714 UQCR10Q9UDW1 63 aa0.66□□□□□ -2.3
CALD1-216ENST00000473714 V9GYH0 126 aa0.66□□□□□ -2.3
CALD1-216ENST00000473714 SPINK7P58062 85 aa0.65□□□□□ -2.31
CALD1-216ENST00000473714 RPL39LQ96EH5 51 aaKnown RBP0.65□□□□□ -2.31
CALD1-216ENST00000473714 SPRR1AP35321 89 aa0.64□□□□□ -2.31
CALD1-216ENST00000473714 SPATA8Q6RVD6 105 aa0.64□□□□□ -2.31
CALD1-216ENST00000473714 SMIM4Q8WVI0 70 aa0.64□□□□□ -2.31
CALD1-216ENST00000473714 C12orf57Q99622 126 aa0.64□□□□□ -2.31
CALD1-216ENST00000473714 TOMM7Q9P0U1 55 aa0.64□□□□□ -2.31
CALD1-216ENST00000473714 A0A0D9SG42 100 aa0.63□□□□□ -2.31
CALD1-216ENST00000473714 ETDCA0A1B0GVM5 59 aa0.63□□□□□ -2.31
CALD1-216ENST00000473714 TMEM218A2RU14 115 aa0.63□□□□□ -2.31
CALD1-216ENST00000473714 C7orf77A4D0Y5 90 aa0.63□□□□□ -2.31
CALD1-216ENST00000473714 NAP1L6A6NFF2 107 aa0.63□□□□□ -2.31
CALD1-216ENST00000473714 I3L3M4 83 aa0.63□□□□□ -2.31
CALD1-216ENST00000473714 APOC3P02656 99 aa0.63□□□□□ -2.31
CALD1-216ENST00000473714 SPINK8P0C7L1 97 aa0.63□□□□□ -2.31
CALD1-216ENST00000473714 H1FX-AS1Q4G0G2 97 aa0.63□□□□□ -2.31
CALD1-216ENST00000473714 TMEM170BQ5T4T1 132 aa0.63□□□□□ -2.31
CALD1-216ENST00000473714 Q6ZRX8 168 aa0.63□□□□□ -2.31
CALD1-216ENST00000473714 MANBALQ9NQG1 85 aa0.63□□□□□ -2.31
CALD1-216ENST00000473714 F8VRH5 84 aa0.62□□□□□ -2.31
CALD1-216ENST00000473714 CHKB-CPT1BH3BT56 60 aa0.62□□□□□ -2.31
CALD1-216ENST00000473714 KRTDAPP60985 99 aa0.62□□□□□ -2.31
CALD1-216ENST00000473714 HSD52Q0P140 79 aa0.62□□□□□ -2.31
CALD1-216ENST00000473714 COX17Q14061 63 aa0.62□□□□□ -2.31
CALD1-216ENST00000473714 ALKAL2Q6UX46 152 aa0.62□□□□□ -2.31
CALD1-216ENST00000473714 WFDC13Q8IUB5 93 aa0.62□□□□□ -2.31
CALD1-216ENST00000473714 S100A16Q96FQ6 103 aaKnown RBP0.62□□□□□ -2.31
CALD1-216ENST00000473714 CRIPTQ9P021 101 aa0.62□□□□□ -2.31
CALD1-216ENST00000473714 Q8IZM0 81 aa0.61□□□□□ -2.31
CALD1-216ENST00000473714 PRO1933Q9H354 126 aa0.61□□□□□ -2.31
CALD1-216ENST00000473714 C10orf95Q9H7T3 257 aa0.61□□□□□ -2.31
CALD1-216ENST00000473714 UQCR11O14957 56 aa0.6□□□□□ -2.31
CALD1-216ENST00000473714 BAGE2Q86Y30 109 aa0.6□□□□□ -2.31
CALD1-216ENST00000473714 MT1LQ93083 61 aa0.6□□□□□ -2.31
CALD1-216ENST00000473714 KCNQ1DNQ9H478 68 aa0.6□□□□□ -2.31
CALD1-216ENST00000473714 COX6CP09669 75 aa0.59□□□□□ -2.31
CALD1-216ENST00000473714 SPRR1BP22528 89 aa0.59□□□□□ -2.31
CALD1-216ENST00000473714 POLR2KP53803 58 aaKnown RBP0.59□□□□□ -2.31
CALD1-216ENST00000473714 RPL39P62891 51 aaKnown RBP0.59□□□□□ -2.31
CALD1-216ENST00000473714 C14orf144Q96I85 54 aa0.59□□□□□ -2.31
CALD1-216ENST00000473714 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.32
CALD1-216ENST00000473714 D6R8Y8 96 aa0.58□□□□□ -2.32
CALD1-216ENST00000473714 SFT2D2O95562 160 aa0.58□□□□□ -2.32
CALD1-216ENST00000473714 SFTA2Q6UW10 78 aa0.58□□□□□ -2.32
CALD1-216ENST00000473714 FAM213BQ8TBF2 198 aa0.58□□□□□ -2.32
CALD1-216ENST00000473714 ST20Q9HBF5 79 aa0.58□□□□□ -2.32
CALD1-216ENST00000473714 PRO1854Q9UHT4 67 aa0.58□□□□□ -2.32
CALD1-216ENST00000473714 SMIM31A0A1B0GVY4 71 aa0.57□□□□□ -2.32
CALD1-216ENST00000473714 FCER1GP30273 86 aa0.57□□□□□ -2.32
CALD1-216ENST00000473714 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
CALD1-216ENST00000473714 KRTAP6-2Q3LI66 62 aa0.57□□□□□ -2.32
CALD1-216ENST00000473714 KRTAP19-5Q3LI72 72 aa0.57□□□□□ -2.32
CALD1-216ENST00000473714 AMELXQ99217 191 aa0.57□□□□□ -2.32
CALD1-216ENST00000473714 VAMP8Q9BV40 100 aa0.57□□□□□ -2.32
CALD1-216ENST00000473714 NXT2Q9NPJ8 142 aaKnown RBP0.57□□□□□ -2.32
CALD1-216ENST00000473714 ZNF815PA8K554 130 aa0.56□□□□□ -2.32
CALD1-216ENST00000473714 M0R143 59 aa0.56□□□□□ -2.32
CALD1-216ENST00000473714 S100A8P05109 93 aa0.56□□□□□ -2.32
CALD1-216ENST00000473714 SEC11AP67812 179 aa0.56□□□□□ -2.32
CALD1-216ENST00000473714 CDKN2A-AS1Q9UH64 79 aa0.56□□□□□ -2.32
CALD1-216ENST00000473714 TRBV7-7A0A0K0K1E9 115 aa0.55□□□□□ -2.32
CALD1-216ENST00000473714 Q6JHZ5 121 aa0.55□□□□□ -2.32
CALD1-216ENST00000473714 PMCHL2Q9BQD1 86 aa0.55□□□□□ -2.32
CALD1-216ENST00000473714 SPCS1Q9Y6A9 102 aa0.55□□□□□ -2.32
CALD1-216ENST00000473714 LINC01558Q9Y6Z2 57 aa0.55□□□□□ -2.32
CALD1-216ENST00000473714 A0A087WXM4 84 aa0.54□□□□□ -2.32
CALD1-216ENST00000473714 TRAV22A0A0B4J277 110 aa0.54□□□□□ -2.32
CALD1-216ENST00000473714 hADV29S1A0JD25 119 aa0.54□□□□□ -2.32
CALD1-216ENST00000473714 NDUFC1O43677 76 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms