RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 LRP1Q07954 4544 aaKnown RBP10.51□□□□□ -0.73
FSCN1-205ENST00000473330 KRTAP10-8P60410 259 aa10.5□□□□□ -0.73
FSCN1-205ENST00000473330 RPL37P61927 97 aaKnown RBP10.49□□□□□ -0.73
FSCN1-205ENST00000473330 HSPG2P98160 4391 aa10.46□□□□□ -0.73
FSCN1-205ENST00000473330 KRTAP13-4Q3LI77 160 aa10.44□□□□□ -0.74
FSCN1-205ENST00000473330 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
FSCN1-205ENST00000473330 XP32Q5T750 250 aa10.42□□□□□ -0.74
FSCN1-205ENST00000473330 CRIPTQ9P021 101 aa10.42□□□□□ -0.74
FSCN1-205ENST00000473330 DMBT1Q9UGM3 2413 aaPredicted RBP10.4□□□□□ -0.74
FSCN1-205ENST00000473330 S4R3F8 94 aa10.38□□□□□ -0.75
FSCN1-205ENST00000473330 ROMO1P60602 79 aa10.36□□□□□ -0.75
FSCN1-205ENST00000473330 KMT2CQ8NEZ4 4911 aaKnown RBP10.35□□□□□ -0.75
FSCN1-205ENST00000473330 Q5VSD8 79 aa10.34□□□□□ -0.75
FSCN1-205ENST00000473330 A0A0D9SG42 100 aa10.34□□□□□ -0.75
FSCN1-205ENST00000473330 MYCBP2O75592 4640 aa10.3□□□□□ -0.76
FSCN1-205ENST00000473330 P0C880 135 aa10.28□□□□□ -0.76
FSCN1-205ENST00000473330 KRTAP17-1Q9BYP8 105 aa10.19□□□□□ -0.78
FSCN1-205ENST00000473330 RYR1P21817 5038 aa10.16□□□□□ -0.78
FSCN1-205ENST00000473330 TPRXLQ17RH7 258 aa10.14□□□□□ -0.79
FSCN1-205ENST00000473330 H3BS24 57 aa10.14□□□□□ -0.79
FSCN1-205ENST00000473330 MT1HL1P0DM35 61 aa10.13□□□□□ -0.79
FSCN1-205ENST00000473330 KRTAP12-2P59991 146 aa10.11□□□□□ -0.79
FSCN1-205ENST00000473330 LPAP08519 4548 aa10.07□□□□□ -0.8
FSCN1-205ENST00000473330 C10orf95Q9H7T3 257 aa10.03□□□□□ -0.8
FSCN1-205ENST00000473330 KRTAP12-1P59990 96 aa10.02□□□□□ -0.81
FSCN1-205ENST00000473330 RYR3Q15413 4870 aa9.99□□□□□ -0.81
FSCN1-205ENST00000473330 SPINT4Q6UDR6 99 aa9.97□□□□□ -0.81
FSCN1-205ENST00000473330 LRP2P98164 4655 aa9.96□□□□□ -0.81
FSCN1-205ENST00000473330 KIAA1109Q2LD37 5005 aa9.95□□□□□ -0.82
FSCN1-205ENST00000473330 M0QZ58 72 aa9.91□□□□□ -0.82
FSCN1-205ENST00000473330 KRTAP15-1Q3LI76 137 aa9.73□□□□□ -0.85
FSCN1-205ENST00000473330 ABCA13Q86UQ4 5058 aa9.71□□□□□ -0.85
FSCN1-205ENST00000473330 R4GN34 69 aa9.64□□□□□ -0.87
FSCN1-205ENST00000473330 EPPK1P58107 5090 aaKnown RBP9.64□□□□□ -0.87
FSCN1-205ENST00000473330 KRTAP4-5Q9BYR2 181 aa9.57□□□□□ -0.88
FSCN1-205ENST00000473330 MUC17Q685J3 4493 aa9.57□□□□□ -0.88
FSCN1-205ENST00000473330 LORP23490 312 aaPredicted RBP9.56□□□□□ -0.88
FSCN1-205ENST00000473330 SEC61BP60468 96 aaKnown RBP9.54□□□□□ -0.88
FSCN1-205ENST00000473330 NDUFAF8A1L188 74 aa9.51□□□□□ -0.89
FSCN1-205ENST00000473330 KRTAP4-1Q9BYQ7 146 aa9.5□□□□□ -0.89
FSCN1-205ENST00000473330 KRTAP19-2Q3LHN2 52 aa9.37□□□□□ -0.91
FSCN1-205ENST00000473330 J3QL48 77 aa9.23□□□□□ -0.93
FSCN1-205ENST00000473330 PLAC4Q8WY50 150 aa9.21□□□□□ -0.93
FSCN1-205ENST00000473330 CAMK2N1Q7Z7J9 78 aa9.16□□□□□ -0.94
FSCN1-205ENST00000473330 HERC2O95714 4834 aa9.11□□□□□ -0.95
FSCN1-205ENST00000473330 PP632Q6XCG6 107 aa9.09□□□□□ -0.95
FSCN1-205ENST00000473330 MUC2Q02817 5179 aa9.06□□□□□ -0.96
FSCN1-205ENST00000473330 FLGP20930 4061 aaPredicted RBP9.06□□□□□ -0.96
FSCN1-205ENST00000473330 BIRC6Q9NR09 4857 aa8.97□□□□□ -0.97
FSCN1-205ENST00000473330 HERC1Q15751 4861 aa8.9□□□□□ -0.98
FSCN1-205ENST00000473330 TNP1P09430 55 aa8.85□□□□□ -0.99
FSCN1-205ENST00000473330 PCLOQ9Y6V0 5065 aa8.84□□□□□ -0.99
FSCN1-205ENST00000473330 KRTAP23-1A1A580 65 aa8.77□□□□□ -1.01
FSCN1-205ENST00000473330 LUZP6Q538Z0 58 aa8.77□□□□□ -1.01
FSCN1-205ENST00000473330 LCE2CQ5TA81 110 aa8.72□□□□□ -1.01
FSCN1-205ENST00000473330 HMCN2Q8NDA2 5059 aa8.67□□□□□ -1.02
FSCN1-205ENST00000473330 SPRR2GQ9BYE4 73 aa8.65□□□□□ -1.02
FSCN1-205ENST00000473330 KRTAP19-1Q8IUB9 90 aa8.62□□□□□ -1.03
FSCN1-205ENST00000473330 FAT4Q6V0I7 4981 aa8.61□□□□□ -1.03
FSCN1-205ENST00000473330 SPRR5A0A1B0GTR4 108 aa8.59□□□□□ -1.03
FSCN1-205ENST00000473330 M0R2T5 61 aa8.47□□□□□ -1.05
FSCN1-205ENST00000473330 MT1HP80294 61 aa8.45□□□□□ -1.06
FSCN1-205ENST00000473330 A0A0A0MQY5 61 aa8.42□□□□□ -1.06
FSCN1-205ENST00000473330 LCE3AQ5TA76 89 aa8.4□□□□□ -1.06
FSCN1-205ENST00000473330 MT1FP04733 61 aa8.38□□□□□ -1.07
FSCN1-205ENST00000473330 MT2AP02795 61 aa8.37□□□□□ -1.07
FSCN1-205ENST00000473330 KRTAP10-10P60014 251 aa8.34□□□□□ -1.07
FSCN1-205ENST00000473330 RNF213Q63HN8 5207 aa8.33□□□□□ -1.08
FSCN1-205ENST00000473330 KRTAP9-8Q9BYQ0 159 aa8.3□□□□□ -1.08
FSCN1-205ENST00000473330 UBR4Q5T4S7 5183 aa8.26□□□□□ -1.09
FSCN1-205ENST00000473330 KRTAP19-8Q3LI54 63 aa8.25□□□□□ -1.09
FSCN1-205ENST00000473330 KRTAP8-1Q8IUC2 63 aa8.18□□□□□ -1.1
FSCN1-205ENST00000473330 MT1BP07438 61 aa8.15□□□□□ -1.1
FSCN1-205ENST00000473330 KRTAP10-5P60370 271 aa8.15□□□□□ -1.1
FSCN1-205ENST00000473330 MT1XP80297 61 aa8.13□□□□□ -1.11
FSCN1-205ENST00000473330 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
FSCN1-205ENST00000473330 KRTAP12-3P60328 96 aa7.98□□□□□ -1.13
FSCN1-205ENST00000473330 KRTAP9-3Q9BYQ3 159 aa7.94□□□□□ -1.14
FSCN1-205ENST00000473330 KRTAP10-7P60409 375 aaPredicted RBP7.93□□□□□ -1.14
FSCN1-205ENST00000473330 PRO2289Q9P1D8 64 aa7.74□□□□□ -1.17
FSCN1-205ENST00000473330 INE1O15225 51 aa7.63□□□□□ -1.19
FSCN1-205ENST00000473330 KRTAP19-5Q3LI72 72 aa7.61□□□□□ -1.19
FSCN1-205ENST00000473330 LCE2BO14633 110 aa7.6□□□□□ -1.19
FSCN1-205ENST00000473330 LCE3CQ5T5A8 94 aa7.53□□□□□ -1.2
FSCN1-205ENST00000473330 USH2AO75445 5202 aa7.45□□□□□ -1.22
FSCN1-205ENST00000473330 KMT2DO14686 5537 aa7.44□□□□□ -1.22
FSCN1-205ENST00000473330 KRTAP4-8A0A0G2JLE6 195 aa7.4□□□□□ -1.22
FSCN1-205ENST00000473330 KRTAP4-8Q9BYQ9 185 aa7.4□□□□□ -1.22
FSCN1-205ENST00000473330 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
FSCN1-205ENST00000473330 KRTAP9-6A8MVA2 160 aa7.3□□□□□ -1.24
FSCN1-205ENST00000473330 KRTAP19-7Q3SYF9 63 aa7.25□□□□□ -1.25
FSCN1-205ENST00000473330 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
FSCN1-205ENST00000473330 KRTAP2-3P0C7H8 128 aa7.08□□□□□ -1.28
FSCN1-205ENST00000473330 KRTAP2-4Q9BYR9 128 aa7.08□□□□□ -1.28
FSCN1-205ENST00000473330 KRTAP2-1Q9BYU5 128 aa7.08□□□□□ -1.28
FSCN1-205ENST00000473330 MT1LQ93083 61 aa7.04□□□□□ -1.28
FSCN1-205ENST00000473330 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
FSCN1-205ENST00000473330 MT1EP04732 61 aa7.01□□□□□ -1.29
FSCN1-205ENST00000473330 SSPOA2VEC9 5147 aa6.91□□□□□ -1.3
FSCN1-205ENST00000473330 KRTAP19-6Q3LI70 58 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms