RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 RELNP78509 3460 aa-0.79□□□□□ -2.54
CCDC66-215ENST00000473322 H0YGX0 51 aa-0.8□□□□□ -2.54
CCDC66-215ENST00000473322 LINC00308Q8TCZ7 52 aa-0.8□□□□□ -2.54
CCDC66-215ENST00000473322 DNAH8Q96JB1 4490 aa-0.8□□□□□ -2.54
CCDC66-215ENST00000473322 SPTBN5Q9NRC6 3674 aaKnown RBP-0.8□□□□□ -2.54
CCDC66-215ENST00000473322 RIF1Q5UIP0 2472 aaKnown RBP-0.8□□□□□ -2.54
CCDC66-215ENST00000473322 CELSR3Q9NYQ7 3312 aa-0.81□□□□□ -2.54
CCDC66-215ENST00000473322 RNF213Q63HN8 5207 aa-0.82□□□□□ -2.54
CCDC66-215ENST00000473322 TEX15Q9BXT5 2789 aa-0.82□□□□□ -2.54
CCDC66-215ENST00000473322 UGGT1Q9NYU2 1555 aa-0.83□□□□□ -2.54
CCDC66-215ENST00000473322 PRXQ9BXM0 1461 aa-0.83□□□□□ -2.54
CCDC66-215ENST00000473322 KRTAP19-5Q3LI72 72 aa-0.83□□□□□ -2.54
CCDC66-215ENST00000473322 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.84□□□□□ -2.54
CCDC66-215ENST00000473322 TLN2Q9Y4G6 2542 aa-0.85□□□□□ -2.55
CCDC66-215ENST00000473322 COL6A5A8TX70 2615 aa-0.85□□□□□ -2.55
CCDC66-215ENST00000473322 A8MTW9 85 aa-0.86□□□□□ -2.55
CCDC66-215ENST00000473322 COL12A1Q99715 3063 aa-0.86□□□□□ -2.55
CCDC66-215ENST00000473322 FRYQ5TBA9 3013 aa-0.86□□□□□ -2.55
CCDC66-215ENST00000473322 ABRACLQ9P1F3 81 aa-0.87□□□□□ -2.55
CCDC66-215ENST00000473322 LAMA3Q16787 3333 aa-0.87□□□□□ -2.55
CCDC66-215ENST00000473322 C5orf42Q9H799 3197 aa-0.88□□□□□ -2.55
CCDC66-215ENST00000473322 M0QZ58 72 aa-0.88□□□□□ -2.55
CCDC66-215ENST00000473322 MT1HP80294 61 aa-0.88□□□□□ -2.55
CCDC66-215ENST00000473322 KRTAP8-1Q8IUC2 63 aa-0.88□□□□□ -2.55
CCDC66-215ENST00000473322 CMYA5Q8N3K9 4069 aa-0.88□□□□□ -2.55
CCDC66-215ENST00000473322 DNHD1Q96M86 4753 aa-0.89□□□□□ -2.55
CCDC66-215ENST00000473322 M0QY20 66 aa-0.89□□□□□ -2.55
CCDC66-215ENST00000473322 ITPR1Q14643 2758 aa-0.9□□□□□ -2.55
CCDC66-215ENST00000473322 SMIM27A0A1W2PRY6 76 aa-0.91□□□□□ -2.56
CCDC66-215ENST00000473322 CLPSL2Q6UWE3 100 aa-0.91□□□□□ -2.56
CCDC66-215ENST00000473322 PLECQ15149 4684 aaKnown RBP-0.91□□□□□ -2.56
CCDC66-215ENST00000473322 ADCY10Q96PN6 1610 aa-0.92□□□□□ -2.56
CCDC66-215ENST00000473322 AGLP35573 1532 aa-0.92□□□□□ -2.56
CCDC66-215ENST00000473322 ABCA13Q86UQ4 5058 aa-0.92□□□□□ -2.56
CCDC66-215ENST00000473322 KIF21BO75037 1637 aa-0.93□□□□□ -2.56
CCDC66-215ENST00000473322 DNAH7Q8WXX0 4024 aa-0.93□□□□□ -2.56
CCDC66-215ENST00000473322 ITPR2Q14571 2701 aa-0.93□□□□□ -2.56
CCDC66-215ENST00000473322 KAAG1Q9UBP8 84 aa-0.95□□□□□ -2.56
CCDC66-215ENST00000473322 EFCAB6Q5THR3 1501 aa-0.96□□□□□ -2.56
CCDC66-215ENST00000473322 SYCP2Q9BX26 1530 aa-0.96□□□□□ -2.56
CCDC66-215ENST00000473322 MT1HL1P0DM35 61 aa-0.97□□□□□ -2.56
CCDC66-215ENST00000473322 PLNP26678 52 aa-0.97□□□□□ -2.56
CCDC66-215ENST00000473322 SMR3BP02814 79 aaPredicted RBP-0.98□□□□□ -2.57
CCDC66-215ENST00000473322 DEFB1P60022 68 aa-0.98□□□□□ -2.57
CCDC66-215ENST00000473322 CEP295Q9C0D2 2601 aa-0.99□□□□□ -2.57
CCDC66-215ENST00000473322 FAM208AQ9UK61 1670 aaKnown RBP-0.99□□□□□ -2.57
CCDC66-215ENST00000473322 A0A1B0GUL6 1792 aa-0.99□□□□□ -2.57
CCDC66-215ENST00000473322 ABCA5Q8WWZ7 1642 aa-1□□□□□ -2.57
CCDC66-215ENST00000473322 CFAP46Q8IYW2 2715 aa-1□□□□□ -2.57
CCDC66-215ENST00000473322 KRTAP20-1Q3LI63 56 aa-1.01□□□□□ -2.57
CCDC66-215ENST00000473322 LMO7Q8WWI1 1683 aa-1.01□□□□□ -2.57
CCDC66-215ENST00000473322 PREX2Q70Z35 1606 aa-1.02□□□□□ -2.57
CCDC66-215ENST00000473322 SRCAPQ6ZRS2 3230 aa-1.03□□□□□ -2.57
CCDC66-215ENST00000473322 CHD7Q9P2D1 2997 aa-1.04□□□□□ -2.58
CCDC66-215ENST00000473322 SMG1Q96Q15 3661 aaKnown RBP-1.04□□□□□ -2.58
CCDC66-215ENST00000473322 DYNC1H1Q14204 4646 aaKnown RBP-1.04□□□□□ -2.58
CCDC66-215ENST00000473322 WFDC10BQ8IUB3 73 aa-1.04□□□□□ -2.58
CCDC66-215ENST00000473322 CMC2Q9NRP2 79 aa-1.05□□□□□ -2.58
CCDC66-215ENST00000473322 EYSQ5T1H1 3165 aa-1.05□□□□□ -2.58
CCDC66-215ENST00000473322 ADGRG4Q8IZF6 3080 aa-1.06□□□□□ -2.58
CCDC66-215ENST00000473322 SPTAN1Q13813 2472 aaKnown RBP-1.06□□□□□ -2.58
CCDC66-215ENST00000473322 ABCC8Q09428 1581 aa-1.07□□□□□ -2.58
CCDC66-215ENST00000473322 DEFB131AP59861 70 aa-1.07□□□□□ -2.58
CCDC66-215ENST00000473322 MGAQ8IWI9 3026 aa-1.08□□□□□ -2.58
CCDC66-215ENST00000473322 NRXN3Q9Y4C0 1643 aa-1.08□□□□□ -2.58
CCDC66-215ENST00000473322 DNAH17Q9UFH2 4485 aa-1.09□□□□□ -2.58
CCDC66-215ENST00000473322 MYO9AB2RTY4 2548 aa-1.09□□□□□ -2.58
CCDC66-215ENST00000473322 LRBAP50851 2863 aa-1.09□□□□□ -2.58
CCDC66-215ENST00000473322 CSMD1Q96PZ7 3565 aa-1.09□□□□□ -2.58
CCDC66-215ENST00000473322 DNAH10Q8IVF4 4471 aa-1.09□□□□□ -2.58
CCDC66-215ENST00000473322 TLN1Q9Y490 2541 aaKnown RBP-1.09□□□□□ -2.58
CCDC66-215ENST00000473322 MT1XP80297 61 aa-1.1□□□□□ -2.59
CCDC66-215ENST00000473322 FANCD2Q9BXW9 1451 aa-1.11□□□□□ -2.59
CCDC66-215ENST00000473322 MT1BP07438 61 aa-1.11□□□□□ -2.59
CCDC66-215ENST00000473322 MROH2AA6NES4 1674 aa-1.12□□□□□ -2.59
CCDC66-215ENST00000473322 LINC01546A6NGU7 62 aa-1.13□□□□□ -2.59
CCDC66-215ENST00000473322 BOD1L1Q8NFC6 3051 aa-1.13□□□□□ -2.59
CCDC66-215ENST00000473322 TRRAPQ9Y4A5 3859 aa-1.14□□□□□ -2.59
CCDC66-215ENST00000473322 DMXL2Q8TDJ6 3036 aa-1.15□□□□□ -2.59
CCDC66-215ENST00000473322 MT1EP04732 61 aa-1.17□□□□□ -2.6
CCDC66-215ENST00000473322 SMIM2Q9BVW6 85 aa-1.17□□□□□ -2.6
CCDC66-215ENST00000473322 ZFHX4Q86UP3 3567 aa-1.18□□□□□ -2.6
CCDC66-215ENST00000473322 MT2AP02795 61 aa-1.18□□□□□ -2.6
CCDC66-215ENST00000473322 MT1MQ8N339 61 aa-1.18□□□□□ -2.6
CCDC66-215ENST00000473322 ATMQ13315 3056 aa-1.19□□□□□ -2.6
CCDC66-215ENST00000473322 PRUNE2Q8WUY3 3088 aa-1.19□□□□□ -2.6
CCDC66-215ENST00000473322 KRTAP19-6Q3LI70 58 aa-1.2□□□□□ -2.6
CCDC66-215ENST00000473322 TFF3Q07654 80 aa-1.21□□□□□ -2.6
CCDC66-215ENST00000473322 FREM2Q5SZK8 3169 aa-1.21□□□□□ -2.6
CCDC66-215ENST00000473322 SPART-AS1P0CW21 52 aa-1.22□□□□□ -2.6
CCDC66-215ENST00000473322 TRPM2O94759 1503 aa-1.22□□□□□ -2.6
CCDC66-215ENST00000473322 MYO15AQ9UKN7 3530 aa-1.22□□□□□ -2.61
CCDC66-215ENST00000473322 MT1LQ93083 61 aa-1.23□□□□□ -2.61
CCDC66-215ENST00000473322 IQGAP1P46940 1657 aa-1.23□□□□□ -2.61
CCDC66-215ENST00000473322 DNAH5Q8TE73 4624 aa-1.25□□□□□ -2.61
CCDC66-215ENST00000473322 CSMD2Q7Z408 3487 aa-1.25□□□□□ -2.61
CCDC66-215ENST00000473322 MT1GP13640 62 aa-1.26□□□□□ -2.61
CCDC66-215ENST00000473322 SNRPGP15A8MWD9 76 aa-1.28□□□□□ -2.61
CCDC66-215ENST00000473322 DDX60Q8IY21 1712 aaKnown RBP-1.29□□□□□ -2.62
CCDC66-215ENST00000473322 POLR2KP53803 58 aaKnown RBP-1.32□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms