RNA–Protein interactions for RNA: ENST00000472339.5

FXR1-209, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5

Gene FXR1, Length 2,130 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-209ENST00000472339 FAT1Q14517 4588 aa7.66□□□□□ -1.18
FXR1-209ENST00000472339 KRTAP13-4Q3LI77 160 aa7.64□□□□□ -1.19
FXR1-209ENST00000472339 A0A1B0GVY2 172 aa7.63□□□□□ -1.19
FXR1-209ENST00000472339 J3QL48 77 aa7.61□□□□□ -1.19
FXR1-209ENST00000472339 A0A0D9SG42 100 aa7.59□□□□□ -1.19
FXR1-209ENST00000472339 S4R3F8 94 aa7.58□□□□□ -1.2
FXR1-209ENST00000472339 FAT3Q8TDW7 4589 aa7.57□□□□□ -1.2
FXR1-209ENST00000472339 P0C880 135 aa7.55□□□□□ -1.2
FXR1-209ENST00000472339 TPRXLQ17RH7 258 aa7.54□□□□□ -1.2
FXR1-209ENST00000472339 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
FXR1-209ENST00000472339 DMBT1Q9UGM3 2413 aaPredicted RBP7.5□□□□□ -1.21
FXR1-209ENST00000472339 TNXBP22105 4242 aa7.49□□□□□ -1.21
FXR1-209ENST00000472339 LRP1Q07954 4544 aaKnown RBP7.48□□□□□ -1.21
FXR1-209ENST00000472339 XP32Q5T750 250 aa7.48□□□□□ -1.21
FXR1-209ENST00000472339 SPINT4Q6UDR6 99 aa7.46□□□□□ -1.21
FXR1-209ENST00000472339 HSPG2P98160 4391 aa7.44□□□□□ -1.22
FXR1-209ENST00000472339 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
FXR1-209ENST00000472339 KRTAP12-2P59991 146 aa7.42□□□□□ -1.22
FXR1-209ENST00000472339 KRTAP12-1P59990 96 aa7.36□□□□□ -1.23
FXR1-209ENST00000472339 KRTAP15-1Q3LI76 137 aa7.33□□□□□ -1.24
FXR1-209ENST00000472339 RYR2Q92736 4967 aa7.32□□□□□ -1.24
FXR1-209ENST00000472339 M0QZ58 72 aa7.31□□□□□ -1.24
FXR1-209ENST00000472339 Q5VSD8 79 aa7.3□□□□□ -1.24
FXR1-209ENST00000472339 KRTAP21-3Q3LHN1 58 aa7.29□□□□□ -1.24
FXR1-209ENST00000472339 MYCBP2O75592 4640 aa7.26□□□□□ -1.25
FXR1-209ENST00000472339 NDUFAF8A1L188 74 aa7.2□□□□□ -1.26
FXR1-209ENST00000472339 LCE2BO14633 110 aa7.19□□□□□ -1.26
FXR1-209ENST00000472339 MT1HL1P0DM35 61 aa7.15□□□□□ -1.26
FXR1-209ENST00000472339 KMT2CQ8NEZ4 4911 aaKnown RBP7.13□□□□□ -1.27
FXR1-209ENST00000472339 RYR1P21817 5038 aa7.1□□□□□ -1.27
FXR1-209ENST00000472339 LPAP08519 4548 aa7.09□□□□□ -1.27
FXR1-209ENST00000472339 KRTAP17-1Q9BYP8 105 aa7.06□□□□□ -1.28
FXR1-209ENST00000472339 R4GN34 69 aa7.04□□□□□ -1.28
FXR1-209ENST00000472339 LRP2P98164 4655 aa7.03□□□□□ -1.28
FXR1-209ENST00000472339 PLAC4Q8WY50 150 aa6.9□□□□□ -1.3
FXR1-209ENST00000472339 LCE2CQ5TA81 110 aa6.89□□□□□ -1.31
FXR1-209ENST00000472339 RYR3Q15413 4870 aa6.89□□□□□ -1.31
FXR1-209ENST00000472339 KIAA1109Q2LD37 5005 aa6.88□□□□□ -1.31
FXR1-209ENST00000472339 LORP23490 312 aaPredicted RBP6.87□□□□□ -1.31
FXR1-209ENST00000472339 SEC61BP60468 96 aaKnown RBP6.84□□□□□ -1.31
FXR1-209ENST00000472339 MUC17Q685J3 4493 aa6.8□□□□□ -1.32
FXR1-209ENST00000472339 PP632Q6XCG6 107 aa6.8□□□□□ -1.32
FXR1-209ENST00000472339 LCE2AQ5TA79 106 aaPredicted RBP6.74□□□□□ -1.33
FXR1-209ENST00000472339 ABCA13Q86UQ4 5058 aa6.74□□□□□ -1.33
FXR1-209ENST00000472339 CAMK2N1Q7Z7J9 78 aa6.71□□□□□ -1.34
FXR1-209ENST00000472339 KRTAP4-1Q9BYQ7 146 aa6.71□□□□□ -1.34
FXR1-209ENST00000472339 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
FXR1-209ENST00000472339 LUZP6Q538Z0 58 aa6.65□□□□□ -1.35
FXR1-209ENST00000472339 KRTAP4-5Q9BYR2 181 aa6.61□□□□□ -1.35
FXR1-209ENST00000472339 EPPK1P58107 5090 aaKnown RBP6.58□□□□□ -1.36
FXR1-209ENST00000472339 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
FXR1-209ENST00000472339 TNP1P09430 55 aa6.51□□□□□ -1.37
FXR1-209ENST00000472339 A0A0A0MQY5 61 aa6.48□□□□□ -1.37
FXR1-209ENST00000472339 FLGP20930 4061 aaPredicted RBP6.44□□□□□ -1.38
FXR1-209ENST00000472339 HERC1Q15751 4861 aa6.43□□□□□ -1.38
FXR1-209ENST00000472339 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
FXR1-209ENST00000472339 BIRC6Q9NR09 4857 aa6.31□□□□□ -1.4
FXR1-209ENST00000472339 HERC2O95714 4834 aa6.28□□□□□ -1.4
FXR1-209ENST00000472339 MUC2Q02817 5179 aa6.25□□□□□ -1.41
FXR1-209ENST00000472339 SPRR2GQ9BYE4 73 aa6.23□□□□□ -1.41
FXR1-209ENST00000472339 PCLOQ9Y6V0 5065 aa6.19□□□□□ -1.42
FXR1-209ENST00000472339 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
FXR1-209ENST00000472339 LCE3AQ5TA76 89 aa6.11□□□□□ -1.43
FXR1-209ENST00000472339 M0R2T5 61 aa6.01□□□□□ -1.45
FXR1-209ENST00000472339 HMCN2Q8NDA2 5059 aa6□□□□□ -1.45
FXR1-209ENST00000472339 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
FXR1-209ENST00000472339 FAT4Q6V0I7 4981 aa5.97□□□□□ -1.45
FXR1-209ENST00000472339 MT1HP80294 61 aa5.96□□□□□ -1.46
FXR1-209ENST00000472339 MT1FP04733 61 aa5.94□□□□□ -1.46
FXR1-209ENST00000472339 MT2AP02795 61 aa5.93□□□□□ -1.46
FXR1-209ENST00000472339 KRTAP10-10P60014 251 aa5.93□□□□□ -1.46
FXR1-209ENST00000472339 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
FXR1-209ENST00000472339 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.47
FXR1-209ENST00000472339 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
FXR1-209ENST00000472339 INE1O15225 51 aa5.86□□□□□ -1.47
FXR1-209ENST00000472339 KRTAP10-5P60370 271 aa5.84□□□□□ -1.47
FXR1-209ENST00000472339 MT1XP80297 61 aa5.83□□□□□ -1.48
FXR1-209ENST00000472339 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
FXR1-209ENST00000472339 UBR4Q5T4S7 5183 aa5.81□□□□□ -1.48
FXR1-209ENST00000472339 MT1BP07438 61 aa5.81□□□□□ -1.48
FXR1-209ENST00000472339 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
FXR1-209ENST00000472339 RNF213Q63HN8 5207 aa5.77□□□□□ -1.49
FXR1-209ENST00000472339 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
FXR1-209ENST00000472339 KRTAP9-3Q9BYQ3 159 aa5.61□□□□□ -1.51
FXR1-209ENST00000472339 LCE3CQ5T5A8 94 aa5.5□□□□□ -1.53
FXR1-209ENST00000472339 KRTAP19-5Q3LI72 72 aa5.49□□□□□ -1.53
FXR1-209ENST00000472339 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
FXR1-209ENST00000472339 KRTAP4-8A0A0G2JLE6 195 aa5.24□□□□□ -1.57
FXR1-209ENST00000472339 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
FXR1-209ENST00000472339 KRTAP4-8Q9BYQ9 185 aa5.24□□□□□ -1.57
FXR1-209ENST00000472339 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
FXR1-209ENST00000472339 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
FXR1-209ENST00000472339 LOC100996750A0A140TA64 210 aa5.23□□□□□ -1.57
FXR1-209ENST00000472339 KRTAP4-6Q9BYQ5 205 aa5.23□□□□□ -1.57
FXR1-209ENST00000472339 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
FXR1-209ENST00000472339 KMT2DO14686 5537 aa5.2□□□□□ -1.58
FXR1-209ENST00000472339 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
FXR1-209ENST00000472339 USH2AO75445 5202 aa5.12□□□□□ -1.59
FXR1-209ENST00000472339 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
FXR1-209ENST00000472339 MT1LQ93083 61 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms