RNA–Protein interactions for RNA: ENST00000472098.5

MDH1-210, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-210ENST00000472098 TTC28Q96AY4 2481 aa2.44□□□□□ -2.02
MDH1-210ENST00000472098 NIPBLQ6KC79 2804 aaeCLIP2.43□□□□□ -2.02
MDH1-210ENST00000472098 A0A0D9SG42 100 aa2.43□□□□□ -2.02
MDH1-210ENST00000472098 ACANP16112 2415 aa2.43□□□□□ -2.02
MDH1-210ENST00000472098 SVEP1Q4LDE5 3571 aa2.43□□□□□ -2.02
MDH1-210ENST00000472098 CFAP46Q8IYW2 2715 aa2.42□□□□□ -2.02
MDH1-210ENST00000472098 J3QKU1 62 aa2.42□□□□□ -2.02
MDH1-210ENST00000472098 TENM4Q6N022 2769 aa2.42□□□□□ -2.02
MDH1-210ENST00000472098 VPS13DQ5THJ4 4388 aa2.42□□□□□ -2.02
MDH1-210ENST00000472098 VPS13CQ709C8 3753 aa2.41□□□□□ -2.02
MDH1-210ENST00000472098 FAM208BQ5VWN6 2430 aa2.41□□□□□ -2.02
MDH1-210ENST00000472098 ANK3Q12955 4377 aaKnown RBP2.41□□□□□ -2.02
MDH1-210ENST00000472098 HIVEP1P15822 2718 aa2.41□□□□□ -2.02
MDH1-210ENST00000472098 HECTD1Q9ULT8 2610 aa2.4□□□□□ -2.02
MDH1-210ENST00000472098 ACACBO00763 2458 aa2.4□□□□□ -2.03
MDH1-210ENST00000472098 COL6A5A8TX70 2615 aa2.39□□□□□ -2.03
MDH1-210ENST00000472098 TRRAPQ9Y4A5 3859 aa2.39□□□□□ -2.03
MDH1-210ENST00000472098 ZNF292O60281 2723 aa2.39□□□□□ -2.03
MDH1-210ENST00000472098 FRAS1Q86XX4 4008 aa2.39□□□□□ -2.03
MDH1-210ENST00000472098 ZANQ9Y493 2812 aa2.38□□□□□ -2.03
MDH1-210ENST00000472098 ABCA12Q86UK0 2595 aa2.38□□□□□ -2.03
MDH1-210ENST00000472098 FBN2P35556 2912 aa2.38□□□□□ -2.03
MDH1-210ENST00000472098 FASNP49327 2511 aaKnown RBP2.37□□□□□ -2.03
MDH1-210ENST00000472098 TGP01266 2768 aa2.37□□□□□ -2.03
MDH1-210ENST00000472098 MUC3AQ02505 3323 aa2.35□□□□□ -2.03
MDH1-210ENST00000472098 SETD2Q9BYW2 2564 aaPredicted RBP2.35□□□□□ -2.03
MDH1-210ENST00000472098 BDP1A6H8Y1 2624 aa2.35□□□□□ -2.03
MDH1-210ENST00000472098 NBEAL1Q6ZS30 2694 aa2.35□□□□□ -2.03
MDH1-210ENST00000472098 Q5VSD8 79 aa2.34□□□□□ -2.03
MDH1-210ENST00000472098 ANK2Q01484 3957 aa2.34□□□□□ -2.04
MDH1-210ENST00000472098 CSMD2Q7Z408 3487 aa2.33□□□□□ -2.04
MDH1-210ENST00000472098 DNAH3Q8TD57 4116 aa2.33□□□□□ -2.04
MDH1-210ENST00000472098 PDZD2O15018 2839 aa2.33□□□□□ -2.04
MDH1-210ENST00000472098 DNAH8Q96JB1 4490 aa2.31□□□□□ -2.04
MDH1-210ENST00000472098 ITPR3Q14573 2671 aa2.31□□□□□ -2.04
MDH1-210ENST00000472098 ITPR2Q14571 2701 aa2.31□□□□□ -2.04
MDH1-210ENST00000472098 PRKDCP78527 4128 aaKnown RBP2.29□□□□□ -2.04
MDH1-210ENST00000472098 PKD1L1Q8TDX9 2849 aa2.29□□□□□ -2.04
MDH1-210ENST00000472098 MYO18BQ8IUG5 2567 aa2.29□□□□□ -2.04
MDH1-210ENST00000472098 DMBT1Q9UGM3 2413 aaPredicted RBP2.29□□□□□ -2.04
MDH1-210ENST00000472098 DNAH7Q8WXX0 4024 aa2.29□□□□□ -2.04
MDH1-210ENST00000472098 DYNC2H1Q8NCM8 4307 aaKnown RBP2.28□□□□□ -2.04
MDH1-210ENST00000472098 LYSTQ99698 3801 aa2.28□□□□□ -2.04
MDH1-210ENST00000472098 ATRQ13535 2644 aa2.28□□□□□ -2.04
MDH1-210ENST00000472098 DNAH6Q9C0G6 4158 aa2.28□□□□□ -2.04
MDH1-210ENST00000472098 FLNBO75369 2602 aaKnown RBP2.28□□□□□ -2.04
MDH1-210ENST00000472098 POLQO75417 2590 aa2.28□□□□□ -2.04
MDH1-210ENST00000472098 CMYA5Q8N3K9 4069 aa2.27□□□□□ -2.05
MDH1-210ENST00000472098 SMR3AQ99954 134 aa2.27□□□□□ -2.05
MDH1-210ENST00000472098 CRCT1Q9UGL9 99 aa2.27□□□□□ -2.05
MDH1-210ENST00000472098 MAST4O15021 2626 aa2.27□□□□□ -2.05
MDH1-210ENST00000472098 DNAH17Q9UFH2 4485 aa2.27□□□□□ -2.05
MDH1-210ENST00000472098 STAB2Q8WWQ8 2551 aa2.27□□□□□ -2.05
MDH1-210ENST00000472098 KRTAP4-1Q9BYQ7 146 aa2.26□□□□□ -2.05
MDH1-210ENST00000472098 FLNAP21333 2647 aaKnown RBP2.26□□□□□ -2.05
MDH1-210ENST00000472098 TENM3Q9P273 2699 aa2.25□□□□□ -2.05
MDH1-210ENST00000472098 COL7A1Q02388 2944 aa2.25□□□□□ -2.05
MDH1-210ENST00000472098 CSMD3Q7Z407 3707 aa2.25□□□□□ -2.05
MDH1-210ENST00000472098 DNAH11Q96DT5 4516 aa2.25□□□□□ -2.05
MDH1-210ENST00000472098 DNAH10Q8IVF4 4471 aa2.23□□□□□ -2.05
MDH1-210ENST00000472098 NOTCH1P46531 2555 aa2.23□□□□□ -2.05
MDH1-210ENST00000472098 CUBNO60494 3623 aa2.23□□□□□ -2.05
MDH1-210ENST00000472098 TEP1Q99973 2627 aaKnown RBP2.22□□□□□ -2.05
MDH1-210ENST00000472098 HECTD4Q9Y4D8 3996 aa2.22□□□□□ -2.05
MDH1-210ENST00000472098 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
MDH1-210ENST00000472098 DNAH2Q9P225 4427 aa2.21□□□□□ -2.06
MDH1-210ENST00000472098 DNAH9Q9NYC9 4486 aa2.21□□□□□ -2.06
MDH1-210ENST00000472098 TNP1P09430 55 aa2.2□□□□□ -2.06
MDH1-210ENST00000472098 FBN3Q75N90 2809 aa2.2□□□□□ -2.06
MDH1-210ENST00000472098 FLNCQ14315 2725 aa2.19□□□□□ -2.06
MDH1-210ENST00000472098 C9orf92A6NGG3 77 aa2.19□□□□□ -2.06
MDH1-210ENST00000472098 KRTAP21-3Q3LHN1 58 aa2.19□□□□□ -2.06
MDH1-210ENST00000472098 HUWE1Q7Z6Z7 4374 aaKnown RBP2.19□□□□□ -2.06
MDH1-210ENST00000472098 USP24Q9UPU5 2620 aa2.18□□□□□ -2.06
MDH1-210ENST00000472098 MGAM2Q2M2H8 2515 aa2.17□□□□□ -2.06
MDH1-210ENST00000472098 SACSQ9NZJ4 4579 aa2.14□□□□□ -2.07
MDH1-210ENST00000472098 IGSF10Q6WRI0 2623 aa2.13□□□□□ -2.07
MDH1-210ENST00000472098 NSD1Q96L73 2696 aaPredicted RBP2.13□□□□□ -2.07
MDH1-210ENST00000472098 MYCBP2O75592 4640 aa2.12□□□□□ -2.07
MDH1-210ENST00000472098 STAB1Q9NY15 2570 aa2.11□□□□□ -2.07
MDH1-210ENST00000472098 TENM1Q9UKZ4 2725 aa2.11□□□□□ -2.07
MDH1-210ENST00000472098 ZNF469Q96JG9 3925 aaPredicted RBP2.11□□□□□ -2.07
MDH1-210ENST00000472098 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
MDH1-210ENST00000472098 KMT2AQ03164 3969 aa2.09□□□□□ -2.07
MDH1-210ENST00000472098 PKHD1L1Q86WI1 4243 aa2.09□□□□□ -2.07
MDH1-210ENST00000472098 PKD1P98161 4303 aa2.05□□□□□ -2.08
MDH1-210ENST00000472098 APOBP04114 4563 aaKnown RBP2.04□□□□□ -2.08
MDH1-210ENST00000472098 PLECQ15149 4684 aaKnown RBP2.04□□□□□ -2.08
MDH1-210ENST00000472098 PKHD1P08F94 4074 aa2.04□□□□□ -2.08
MDH1-210ENST00000472098 LRP1Q07954 4544 aaKnown RBP2.03□□□□□ -2.08
MDH1-210ENST00000472098 VPS13BQ7Z7G8 4022 aa2.03□□□□□ -2.08
MDH1-210ENST00000472098 FLGP20930 4061 aaPredicted RBP2.03□□□□□ -2.08
MDH1-210ENST00000472098 TNXBP22105 4242 aa2.01□□□□□ -2.09
MDH1-210ENST00000472098 DNAH5Q8TE73 4624 aa2.01□□□□□ -2.09
MDH1-210ENST00000472098 STARD9Q9P2P6 4700 aa1.99□□□□□ -2.09
MDH1-210ENST00000472098 HSPG2P98160 4391 aa1.99□□□□□ -2.09
MDH1-210ENST00000472098 DYNC1H1Q14204 4646 aaKnown RBP1.99□□□□□ -2.09
MDH1-210ENST00000472098 LRP1BQ9NZR2 4599 aa1.99□□□□□ -2.09
MDH1-210ENST00000472098 KRTAP8-1Q8IUC2 63 aa1.98□□□□□ -2.09
MDH1-210ENST00000472098 FAT2Q9NYQ8 4349 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms