RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 DNAH11Q96DT5 4516 aa5.52□□□□□ -1.53
IRF1-208ENST00000472045 STARD9Q9P2P6 4700 aa5.51□□□□□ -1.53
IRF1-208ENST00000472045 DNAH1Q9P2D7 4330 aa5.5□□□□□ -1.53
IRF1-208ENST00000472045 KRTAP3-3Q9BYR6 98 aa5.49□□□□□ -1.53
IRF1-208ENST00000472045 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
IRF1-208ENST00000472045 ANK2Q01484 3957 aa5.45□□□□□ -1.54
IRF1-208ENST00000472045 FAT1Q14517 4588 aa5.44□□□□□ -1.54
IRF1-208ENST00000472045 RYR1P21817 5038 aa5.43□□□□□ -1.54
IRF1-208ENST00000472045 KRTAP3-2Q9BYR7 98 aa5.43□□□□□ -1.54
IRF1-208ENST00000472045 VPS13DQ5THJ4 4388 aa5.42□□□□□ -1.54
IRF1-208ENST00000472045 DYNC1H1Q14204 4646 aaKnown RBP5.42□□□□□ -1.54
IRF1-208ENST00000472045 KRTAP10-12P60413 245 aa5.41□□□□□ -1.54
IRF1-208ENST00000472045 DNAH10Q8IVF4 4471 aa5.4□□□□□ -1.54
IRF1-208ENST00000472045 KIAA1109Q2LD37 5005 aa5.4□□□□□ -1.55
IRF1-208ENST00000472045 LRP1BQ9NZR2 4599 aa5.37□□□□□ -1.55
IRF1-208ENST00000472045 KMT2AQ03164 3969 aa5.32□□□□□ -1.56
IRF1-208ENST00000472045 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
IRF1-208ENST00000472045 RYR3Q15413 4870 aa5.31□□□□□ -1.56
IRF1-208ENST00000472045 MT1HP80294 61 aa5.29□□□□□ -1.56
IRF1-208ENST00000472045 DNAH17Q9UFH2 4485 aa5.28□□□□□ -1.56
IRF1-208ENST00000472045 LYSTQ99698 3801 aa5.27□□□□□ -1.57
IRF1-208ENST00000472045 LORP23490 312 aaPredicted RBP5.25□□□□□ -1.57
IRF1-208ENST00000472045 CRCT1Q9UGL9 99 aa5.24□□□□□ -1.57
IRF1-208ENST00000472045 DNAH2Q9P225 4427 aa5.22□□□□□ -1.57
IRF1-208ENST00000472045 KRTAP17-1Q9BYP8 105 aa5.21□□□□□ -1.57
IRF1-208ENST00000472045 SACSQ9NZJ4 4579 aa5.2□□□□□ -1.58
IRF1-208ENST00000472045 FAT2Q9NYQ8 4349 aa5.2□□□□□ -1.58
IRF1-208ENST00000472045 KRTAP8-1Q8IUC2 63 aa5.19□□□□□ -1.58
IRF1-208ENST00000472045 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
IRF1-208ENST00000472045 CMYA5Q8N3K9 4069 aa5.18□□□□□ -1.58
IRF1-208ENST00000472045 DYNC2H1Q8NCM8 4307 aaKnown RBP5.17□□□□□ -1.58
IRF1-208ENST00000472045 DNAH3Q8TD57 4116 aa5.17□□□□□ -1.58
IRF1-208ENST00000472045 MT2AP02795 61 aa5.15□□□□□ -1.58
IRF1-208ENST00000472045 DNAH8Q96JB1 4490 aa5.14□□□□□ -1.59
IRF1-208ENST00000472045 RYR2Q92736 4967 aa5.13□□□□□ -1.59
IRF1-208ENST00000472045 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
IRF1-208ENST00000472045 VPS13BQ7Z7G8 4022 aa5.12□□□□□ -1.59
IRF1-208ENST00000472045 HYDINQ4G0P3 5121 aa5.11□□□□□ -1.59
IRF1-208ENST00000472045 APOBP04114 4563 aaKnown RBP5.1□□□□□ -1.59
IRF1-208ENST00000472045 MYCBP2O75592 4640 aa5.09□□□□□ -1.6
IRF1-208ENST00000472045 HERC2O95714 4834 aa5.07□□□□□ -1.6
IRF1-208ENST00000472045 LRP1Q07954 4544 aaKnown RBP5.06□□□□□ -1.6
IRF1-208ENST00000472045 KMT2CQ8NEZ4 4911 aaKnown RBP5.05□□□□□ -1.6
IRF1-208ENST00000472045 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
IRF1-208ENST00000472045 FAT3Q8TDW7 4589 aa5.04□□□□□ -1.6
IRF1-208ENST00000472045 MT1FP04733 61 aa5.04□□□□□ -1.6
IRF1-208ENST00000472045 BIRC6Q9NR09 4857 aa5.03□□□□□ -1.6
IRF1-208ENST00000472045 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
IRF1-208ENST00000472045 DNAH6Q9C0G6 4158 aa5□□□□□ -1.61
IRF1-208ENST00000472045 DNAH7Q8WXX0 4024 aa5□□□□□ -1.61
IRF1-208ENST00000472045 INE1O15225 51 aa4.96□□□□□ -1.62
IRF1-208ENST00000472045 PKHD1P08F94 4074 aa4.94□□□□□ -1.62
IRF1-208ENST00000472045 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
IRF1-208ENST00000472045 HSPG2P98160 4391 aa4.87□□□□□ -1.63
IRF1-208ENST00000472045 EPPK1P58107 5090 aaKnown RBP4.85□□□□□ -1.63
IRF1-208ENST00000472045 HECTD4Q9Y4D8 3996 aa4.83□□□□□ -1.64
IRF1-208ENST00000472045 LRP2P98164 4655 aa4.82□□□□□ -1.64
IRF1-208ENST00000472045 FRAS1Q86XX4 4008 aa4.82□□□□□ -1.64
IRF1-208ENST00000472045 PCLOQ9Y6V0 5065 aa4.78□□□□□ -1.64
IRF1-208ENST00000472045 KRTAP10-7P60409 375 aaPredicted RBP4.73□□□□□ -1.65
IRF1-208ENST00000472045 PKD1P98161 4303 aa4.71□□□□□ -1.65
IRF1-208ENST00000472045 ABCA13Q86UQ4 5058 aa4.71□□□□□ -1.66
IRF1-208ENST00000472045 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.66
IRF1-208ENST00000472045 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
IRF1-208ENST00000472045 HERC1Q15751 4861 aa4.7□□□□□ -1.66
IRF1-208ENST00000472045 KRTAP10-5P60370 271 aa4.69□□□□□ -1.66
IRF1-208ENST00000472045 KRTAP19-1Q8IUB9 90 aa4.68□□□□□ -1.66
IRF1-208ENST00000472045 KRTAP9-8Q9BYQ0 159 aa4.65□□□□□ -1.67
IRF1-208ENST00000472045 SPRR2EP22531 72 aa4.64□□□□□ -1.67
IRF1-208ENST00000472045 SPRR2BP35325 72 aa4.64□□□□□ -1.67
IRF1-208ENST00000472045 SPRR2AP35326 72 aa4.64□□□□□ -1.67
IRF1-208ENST00000472045 LPAP08519 4548 aa4.63□□□□□ -1.67
IRF1-208ENST00000472045 LCE2CQ5TA81 110 aa4.63□□□□□ -1.67
IRF1-208ENST00000472045 PKHD1L1Q86WI1 4243 aa4.59□□□□□ -1.68
IRF1-208ENST00000472045 MT1BP07438 61 aa4.56□□□□□ -1.68
IRF1-208ENST00000472045 KRTAP9-3Q9BYQ3 159 aa4.55□□□□□ -1.68
IRF1-208ENST00000472045 MT1XP80297 61 aa4.53□□□□□ -1.68
IRF1-208ENST00000472045 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
IRF1-208ENST00000472045 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
IRF1-208ENST00000472045 SPRR2DP22532 72 aa4.5□□□□□ -1.69
IRF1-208ENST00000472045 UBR4Q5T4S7 5183 aa4.46□□□□□ -1.69
IRF1-208ENST00000472045 FSIP2Q5CZC0 6907 aa4.45□□□□□ -1.7
IRF1-208ENST00000472045 LCE2BO14633 110 aa4.44□□□□□ -1.7
IRF1-208ENST00000472045 TNXBP22105 4242 aa4.41□□□□□ -1.7
IRF1-208ENST00000472045 KRTAP19-2Q3LHN2 52 aa4.4□□□□□ -1.7
IRF1-208ENST00000472045 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.71
IRF1-208ENST00000472045 RNF213Q63HN8 5207 aa4.39□□□□□ -1.71
IRF1-208ENST00000472045 KRTAP4-8A0A0G2JLE6 195 aa4.37□□□□□ -1.71
IRF1-208ENST00000472045 KRTAP4-8Q9BYQ9 185 aa4.37□□□□□ -1.71
IRF1-208ENST00000472045 MT1GP13640 62 aa4.33□□□□□ -1.72
IRF1-208ENST00000472045 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
IRF1-208ENST00000472045 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
IRF1-208ENST00000472045 HMCN2Q8NDA2 5059 aa4.26□□□□□ -1.73
IRF1-208ENST00000472045 MUC2Q02817 5179 aa4.25□□□□□ -1.73
IRF1-208ENST00000472045 LCE2DQ5TA82 110 aaPredicted RBP4.25□□□□□ -1.73
IRF1-208ENST00000472045 LCE2AQ5TA79 106 aaPredicted RBP4.24□□□□□ -1.73
IRF1-208ENST00000472045 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
IRF1-208ENST00000472045 MUC17Q685J3 4493 aa4.22□□□□□ -1.73
IRF1-208ENST00000472045 KRTAP9-6A0A140TA67 174 aa4.22□□□□□ -1.73
IRF1-208ENST00000472045 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms