RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 SPCS1Q9Y6A9 102 aa8.38□□□□□ -1.07
CCDC78-208ENST00000471861 SPRR2DP22532 72 aa8.37□□□□□ -1.07
CCDC78-208ENST00000471861 Q8N9L7 120 aa8.37□□□□□ -1.07
CCDC78-208ENST00000471861 CRIPTQ9P021 101 aa8.37□□□□□ -1.07
CCDC78-208ENST00000471861 CXCL6P80162 114 aa8.34□□□□□ -1.07
CCDC78-208ENST00000471861 MT1XP80297 61 aa8.34□□□□□ -1.07
CCDC78-208ENST00000471861 BPY2O14599 106 aa8.33□□□□□ -1.08
CCDC78-208ENST00000471861 K7EP34 96 aa8.27□□□□□ -1.09
CCDC78-208ENST00000471861 PCP4L1A6NKN8 68 aa8.26□□□□□ -1.09
CCDC78-208ENST00000471861 PRO0461Q9UI25 63 aa8.26□□□□□ -1.09
CCDC78-208ENST00000471861 PRO2289Q9P1D8 64 aa8.25□□□□□ -1.09
CCDC78-208ENST00000471861 A0A087WVE0 104 aa8.24□□□□□ -1.09
CCDC78-208ENST00000471861 GPR98Q8WXG9 6306 aa8.22□□□□□ -1.09
CCDC78-208ENST00000471861 KRTAP12-2P59991 146 aa8.21□□□□□ -1.1
CCDC78-208ENST00000471861 LCE3BQ5TA77 95 aa8.2□□□□□ -1.1
CCDC78-208ENST00000471861 KRTAP4-8A0A0G2JLE6 195 aa8.19□□□□□ -1.1
CCDC78-208ENST00000471861 KRTAP4-8Q9BYQ9 185 aa8.19□□□□□ -1.1
CCDC78-208ENST00000471861 GTF2H5Q6ZYL4 71 aa8.18□□□□□ -1.1
CCDC78-208ENST00000471861 F8W1H4 67 aa8.11□□□□□ -1.11
CCDC78-208ENST00000471861 A8MUN3 132 aa8.09□□□□□ -1.11
CCDC78-208ENST00000471861 H0YAA0 97 aa8.09□□□□□ -1.11
CCDC78-208ENST00000471861 UBL5Q9BZL1 73 aa8.08□□□□□ -1.12
CCDC78-208ENST00000471861 ETDBQ3ZM63 59 aa8.07□□□□□ -1.12
CCDC78-208ENST00000471861 PLAC4Q8WY50 150 aa8.02□□□□□ -1.13
CCDC78-208ENST00000471861 ADM2Q7Z4H4 148 aa8□□□□□ -1.13
CCDC78-208ENST00000471861 CYP4F30PQ9H0H9 118 aa8□□□□□ -1.13
CCDC78-208ENST00000471861 TP53AIP1Q9HCN2 124 aa7.98□□□□□ -1.13
CCDC78-208ENST00000471861 KRTAP10-7P60409 375 aaPredicted RBP7.95□□□□□ -1.14
CCDC78-208ENST00000471861 DSTQ03001 7570 aaKnown RBP7.94□□□□□ -1.14
CCDC78-208ENST00000471861 NDUFC1O43677 76 aa7.93□□□□□ -1.14
CCDC78-208ENST00000471861 KRTAP10-12P60413 245 aa7.89□□□□□ -1.15
CCDC78-208ENST00000471861 ACYP1P07311 99 aa7.88□□□□□ -1.15
CCDC78-208ENST00000471861 FAM240AA0A1B0GVK7 77 aa7.86□□□□□ -1.15
CCDC78-208ENST00000471861 A0A1B0GV90 55 aa7.83□□□□□ -1.16
CCDC78-208ENST00000471861 KRTAP4-9Q9BYQ8 210 aa7.83□□□□□ -1.16
CCDC78-208ENST00000471861 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
CCDC78-208ENST00000471861 R4GN34 69 aa7.81□□□□□ -1.16
CCDC78-208ENST00000471861 TRAV22A0A0B4J277 110 aa7.79□□□□□ -1.16
CCDC78-208ENST00000471861 P0C880 135 aa7.78□□□□□ -1.16
CCDC78-208ENST00000471861 ATP5EP2Q5VTU8 51 aa7.78□□□□□ -1.16
CCDC78-208ENST00000471861 M0QZ58 72 aa7.74□□□□□ -1.17
CCDC78-208ENST00000471861 HIST1H4AP62805 103 aaKnown RBP7.71□□□□□ -1.18
CCDC78-208ENST00000471861 LINC00643Q86TS7 51 aa7.7□□□□□ -1.18
CCDC78-208ENST00000471861 LINC01554Q52M75 96 aa7.67□□□□□ -1.18
CCDC78-208ENST00000471861 C20orf197Q8N268 126 aa7.61□□□□□ -1.19
CCDC78-208ENST00000471861 KRTAP3-2Q9BYR7 98 aa7.61□□□□□ -1.19
CCDC78-208ENST00000471861 UQCRQO14949 82 aa7.6□□□□□ -1.19
CCDC78-208ENST00000471861 LCE5AQ5TCM9 118 aa7.6□□□□□ -1.19
CCDC78-208ENST00000471861 J3QR89 54 aa7.59□□□□□ -1.19
CCDC78-208ENST00000471861 H0Y9P7 68 aa7.58□□□□□ -1.2
CCDC78-208ENST00000471861 LCE1DQ5T752 114 aa7.58□□□□□ -1.2
CCDC78-208ENST00000471861 ATOX1O00244 68 aa7.54□□□□□ -1.2
CCDC78-208ENST00000471861 HMCN1Q96RW7 5635 aa7.52□□□□□ -1.21
CCDC78-208ENST00000471861 OCR1Q9BZK8 76 aa7.49□□□□□ -1.21
CCDC78-208ENST00000471861 KRTAP19-7Q3SYF9 63 aa7.47□□□□□ -1.21
CCDC78-208ENST00000471861 KRTAP19-3Q7Z4W3 81 aa7.47□□□□□ -1.21
CCDC78-208ENST00000471861 AHNAK2Q8IVF2 5795 aa7.45□□□□□ -1.22
CCDC78-208ENST00000471861 LINC00208Q96KT6 92 aa7.44□□□□□ -1.22
CCDC78-208ENST00000471861 MT1EP04732 61 aa7.42□□□□□ -1.22
CCDC78-208ENST00000471861 MP68P56378 58 aa7.42□□□□□ -1.22
CCDC78-208ENST00000471861 MT4P47944 62 aa7.39□□□□□ -1.23
CCDC78-208ENST00000471861 KRTAP5-10Q6L8G5 202 aa7.38□□□□□ -1.23
CCDC78-208ENST00000471861 K7ERU9 68 aa7.36□□□□□ -1.23
CCDC78-208ENST00000471861 SCGB1A1P11684 91 aa7.35□□□□□ -1.23
CCDC78-208ENST00000471861 H3BPC8 53 aa7.34□□□□□ -1.23
CCDC78-208ENST00000471861 LCE4AQ5TA78 99 aa7.34□□□□□ -1.23
CCDC78-208ENST00000471861 CYSTM1Q9H1C7 97 aa7.33□□□□□ -1.24
CCDC78-208ENST00000471861 MT-ATP8P03928 68 aa7.32□□□□□ -1.24
CCDC78-208ENST00000471861 DMAC1Q96GE9 116 aa7.28□□□□□ -1.24
CCDC78-208ENST00000471861 SMIM20Q8N5G0 67 aa7.21□□□□□ -1.26
CCDC78-208ENST00000471861 TRAV7A0A075B6U4 112 aa7.2□□□□□ -1.26
CCDC78-208ENST00000471861 MT1GP13640 62 aa7.17□□□□□ -1.26
CCDC78-208ENST00000471861 KRTAP5-4Q6L8H1 288 aa7.16□□□□□ -1.26
CCDC78-208ENST00000471861 KRTAP4-6Q9BYQ5 205 aa7.15□□□□□ -1.26
CCDC78-208ENST00000471861 KRTAP5-7Q6L8G8 165 aa7.14□□□□□ -1.27
CCDC78-208ENST00000471861 MT1MQ8N339 61 aa7.11□□□□□ -1.27
CCDC78-208ENST00000471861 KRTAP19-5Q3LI72 72 aa7.09□□□□□ -1.27
CCDC78-208ENST00000471861 PP632Q6XCG6 107 aa7.08□□□□□ -1.28
CCDC78-208ENST00000471861 CAMK2N1Q7Z7J9 78 aa7.06□□□□□ -1.28
CCDC78-208ENST00000471861 KRTAP13-4Q3LI77 160 aa7.05□□□□□ -1.28
CCDC78-208ENST00000471861 KRTAP5-3Q6L8H2 238 aa7.04□□□□□ -1.28
CCDC78-208ENST00000471861 ACYP2P14621 99 aa7.03□□□□□ -1.28
CCDC78-208ENST00000471861 SNURFQ9Y675 71 aa7.03□□□□□ -1.28
CCDC78-208ENST00000471861 KRTAP4-3Q9BYR4 195 aa7.01□□□□□ -1.29
CCDC78-208ENST00000471861 SERP2Q8N6R1 65 aa7□□□□□ -1.29
CCDC78-208ENST00000471861 MT1LQ93083 61 aa6.98□□□□□ -1.29
CCDC78-208ENST00000471861 A0A0D9SG42 100 aa6.97□□□□□ -1.29
CCDC78-208ENST00000471861 SPANXA2-OT1Q8N9U9 137 aa6.93□□□□□ -1.3
CCDC78-208ENST00000471861 SPTSSBQ8NFR3 76 aa6.92□□□□□ -1.3
CCDC78-208ENST00000471861 CHKB-CPT1BH3BT56 60 aa6.9□□□□□ -1.3
CCDC78-208ENST00000471861 COX7CP15954 63 aa6.83□□□□□ -1.32
CCDC78-208ENST00000471861 SPRR5A0A1B0GTR4 108 aa6.81□□□□□ -1.32
CCDC78-208ENST00000471861 KRTAP20-2Q3LI61 65 aa6.79□□□□□ -1.32
CCDC78-208ENST00000471861 COA5Q86WW8 74 aa6.73□□□□□ -1.33
CCDC78-208ENST00000471861 H7BZZ5 65 aa6.7□□□□□ -1.34
CCDC78-208ENST00000471861 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
CCDC78-208ENST00000471861 C10orf95Q9H7T3 257 aa6.66□□□□□ -1.34
CCDC78-208ENST00000471861 ANAPC13Q9BS18 74 aa6.64□□□□□ -1.35
CCDC78-208ENST00000471861 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
CCDC78-208ENST00000471861 KRTAP5-5Q701N2 237 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms