RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 SPANXDQ9BXN6 97 aa2.01□□□□□ -2.09
GCFC2-205ENST00000470197 ORMDL1Q9P0S3 153 aa2□□□□□ -2.09
GCFC2-205ENST00000470197 LINC01546A6NGU7 62 aa2□□□□□ -2.09
GCFC2-205ENST00000470197 MT1HP80294 61 aa2□□□□□ -2.09
GCFC2-205ENST00000470197 SNHG12Q9BXW3 62 aa2□□□□□ -2.09
GCFC2-205ENST00000470197 ZCCHC13Q8WW36 166 aaKnown RBP2□□□□□ -2.09
GCFC2-205ENST00000470197 LINC00308Q8TCZ7 52 aa1.99□□□□□ -2.09
GCFC2-205ENST00000470197 Q96NJ1 140 aa1.99□□□□□ -2.09
GCFC2-205ENST00000470197 RPL37P61927 97 aaKnown RBP1.99□□□□□ -2.09
GCFC2-205ENST00000470197 RBM3P98179 157 aaKnown RBP1.99□□□□□ -2.09
GCFC2-205ENST00000470197 LINC00846Q9NV44 126 aa1.98□□□□□ -2.09
GCFC2-205ENST00000470197 ATOH7Q8N100 152 aa1.98□□□□□ -2.09
GCFC2-205ENST00000470197 TRAV13-2A0A0B4J235 113 aa1.97□□□□□ -2.09
GCFC2-205ENST00000470197 ELOF1P60002 83 aaKnown RBP1.97□□□□□ -2.09
GCFC2-205ENST00000470197 KRTDAPP60985 99 aa1.97□□□□□ -2.09
GCFC2-205ENST00000470197 Q6JHZ5 121 aa1.97□□□□□ -2.09
GCFC2-205ENST00000470197 SPRR1BP22528 89 aa1.97□□□□□ -2.09
GCFC2-205ENST00000470197 PP632Q6XCG6 107 aa1.97□□□□□ -2.09
GCFC2-205ENST00000470197 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
GCFC2-205ENST00000470197 Q6ZQY7 126 aa1.96□□□□□ -2.1
GCFC2-205ENST00000470197 SMIM6P0DI80 62 aa1.96□□□□□ -2.1
GCFC2-205ENST00000470197 hADV29S1A0JD25 119 aa1.96□□□□□ -2.1
GCFC2-205ENST00000470197 LOC101927531A0A1B0GV80 90 aa1.95□□□□□ -2.1
GCFC2-205ENST00000470197 SYS1-DBNDD2H3BUS1 97 aa1.95□□□□□ -2.1
GCFC2-205ENST00000470197 IFITM1P13164 125 aa1.95□□□□□ -2.1
GCFC2-205ENST00000470197 MUSTN1Q8IVN3 82 aa1.95□□□□□ -2.1
GCFC2-205ENST00000470197 H3BUT2 72 aa1.95□□□□□ -2.1
GCFC2-205ENST00000470197 SPTSSBQ8NFR3 76 aa1.94□□□□□ -2.1
GCFC2-205ENST00000470197 SMIM11BQ8TCY0 68 aa1.94□□□□□ -2.1
GCFC2-205ENST00000470197 SERP1Q9Y6X1 66 aa1.94□□□□□ -2.1
GCFC2-205ENST00000470197 TRBV7-7A0A0K0K1E9 115 aa1.93□□□□□ -2.1
GCFC2-205ENST00000470197 JMJD7-PLA2G4BH0Y9G9 81 aa1.93□□□□□ -2.1
GCFC2-205ENST00000470197 PDE6GP18545 87 aa1.92□□□□□ -2.1
GCFC2-205ENST00000470197 BVES-AS1Q5T3Y7 98 aa1.92□□□□□ -2.1
GCFC2-205ENST00000470197 IGLV5-48A0A075B6I7 105 aa1.92□□□□□ -2.1
GCFC2-205ENST00000470197 HSD52Q0P140 79 aa1.92□□□□□ -2.1
GCFC2-205ENST00000470197 C3orf79P0CE67 100 aa1.91□□□□□ -2.1
GCFC2-205ENST00000470197 LINC00575Q6W349 94 aa1.91□□□□□ -2.1
GCFC2-205ENST00000470197 KRTAP19-2Q3LHN2 52 aa1.91□□□□□ -2.1
GCFC2-205ENST00000470197 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
GCFC2-205ENST00000470197 LOC110117498A0A087WWA1 95 aa1.89□□□□□ -2.11
GCFC2-205ENST00000470197 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
GCFC2-205ENST00000470197 INE1O15225 51 aa1.89□□□□□ -2.11
GCFC2-205ENST00000470197 LCE3AQ5TA76 89 aa1.89□□□□□ -2.11
GCFC2-205ENST00000470197 MUC17Q685J3 4493 aa1.88□□□□□ -2.11
GCFC2-205ENST00000470197 H0YGX0 51 aa1.88□□□□□ -2.11
GCFC2-205ENST00000470197 NDUFB1O75438 58 aa1.88□□□□□ -2.11
GCFC2-205ENST00000470197 PPDPFLQ8WWR9 84 aa1.88□□□□□ -2.11
GCFC2-205ENST00000470197 COX6CP09669 75 aa1.87□□□□□ -2.11
GCFC2-205ENST00000470197 LINC00208Q96KT6 92 aa1.87□□□□□ -2.11
GCFC2-205ENST00000470197 IGKV3D-7A0A0C4DH55 119 aa1.86□□□□□ -2.11
GCFC2-205ENST00000470197 GTF2H5Q6ZYL4 71 aa1.86□□□□□ -2.11
GCFC2-205ENST00000470197 CCKP06307 115 aa1.86□□□□□ -2.11
GCFC2-205ENST00000470197 WFDC13Q8IUB5 93 aa1.86□□□□□ -2.11
GCFC2-205ENST00000470197 SPINK7P58062 85 aa1.85□□□□□ -2.11
GCFC2-205ENST00000470197 MT2AP02795 61 aa1.85□□□□□ -2.11
GCFC2-205ENST00000470197 HCG22E2RYF7 251 aa1.84□□□□□ -2.11
GCFC2-205ENST00000470197 MT1FP04733 61 aa1.83□□□□□ -2.12
GCFC2-205ENST00000470197 PRO1854Q9UHT4 67 aa1.83□□□□□ -2.12
GCFC2-205ENST00000470197 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
GCFC2-205ENST00000470197 TRBV7-4A0A0J9YYF1 115 aa1.82□□□□□ -2.12
GCFC2-205ENST00000470197 C20orf197Q8N268 126 aa1.82□□□□□ -2.12
GCFC2-205ENST00000470197 DMAC1Q96GE9 116 aa1.82□□□□□ -2.12
GCFC2-205ENST00000470197 MT-ATP8P03928 68 aa1.81□□□□□ -2.12
GCFC2-205ENST00000470197 SPATA45Q537H7 98 aa1.81□□□□□ -2.12
GCFC2-205ENST00000470197 VAMP8Q9BV40 100 aa1.81□□□□□ -2.12
GCFC2-205ENST00000470197 KRTAP5-5Q701N2 237 aaPredicted RBP1.81□□□□□ -2.12
GCFC2-205ENST00000470197 M0R143 59 aa1.8□□□□□ -2.12
GCFC2-205ENST00000470197 COX8AP10176 69 aa1.8□□□□□ -2.12
GCFC2-205ENST00000470197 USH2AO75445 5202 aa1.8□□□□□ -2.12
GCFC2-205ENST00000470197 CYSTM1Q9H1C7 97 aa1.8□□□□□ -2.12
GCFC2-205ENST00000470197 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
GCFC2-205ENST00000470197 NREPQ16612 68 aa1.79□□□□□ -2.12
GCFC2-205ENST00000470197 SNURFQ9Y675 71 aa1.79□□□□□ -2.12
GCFC2-205ENST00000470197 FCGBPQ9Y6R7 5405 aaPredicted RBP1.79□□□□□ -2.12
GCFC2-205ENST00000470197 KRTAP5-9P26371 169 aa1.79□□□□□ -2.12
GCFC2-205ENST00000470197 LINC00472Q9H8W2 130 aa1.78□□□□□ -2.12
GCFC2-205ENST00000470197 KRTAP12-4P60329 112 aa1.78□□□□□ -2.12
GCFC2-205ENST00000470197 H1FX-AS1Q4G0G2 97 aa1.78□□□□□ -2.12
GCFC2-205ENST00000470197 SSPOA2VEC9 5147 aa1.78□□□□□ -2.12
GCFC2-205ENST00000470197 FLGP20930 4061 aaPredicted RBP1.78□□□□□ -2.13
GCFC2-205ENST00000470197 SYNE2Q8WXH0 6885 aaKnown RBP1.78□□□□□ -2.13
GCFC2-205ENST00000470197 HIGD1BQ9P298 99 aa1.77□□□□□ -2.13
GCFC2-205ENST00000470197 ATXN8Q156A1 80 aa1.77□□□□□ -2.13
GCFC2-205ENST00000470197 KRTAP19-6Q3LI70 58 aa1.76□□□□□ -2.13
GCFC2-205ENST00000470197 MRPL34Q9BQ48 92 aaKnown RBP1.76□□□□□ -2.13
GCFC2-205ENST00000470197 MACF1Q9UPN3 7388 aaKnown RBP1.76□□□□□ -2.13
GCFC2-205ENST00000470197 A0A1W2PPM0 123 aa1.74□□□□□ -2.13
GCFC2-205ENST00000470197 Q5VV11 94 aa1.74□□□□□ -2.13
GCFC2-205ENST00000470197 KRTAP20-1Q3LI63 56 aa1.74□□□□□ -2.13
GCFC2-205ENST00000470197 K7EQZ3 153 aa1.73□□□□□ -2.13
GCFC2-205ENST00000470197 UQCR10Q9UDW1 63 aa1.72□□□□□ -2.13
GCFC2-205ENST00000470197 S4R3F8 94 aa1.72□□□□□ -2.13
GCFC2-205ENST00000470197 MMP24-AS1A0A0U1RRL7 71 aa1.69□□□□□ -2.14
GCFC2-205ENST00000470197 COL5A1-AS1Q5SY13 56 aa1.69□□□□□ -2.14
GCFC2-205ENST00000470197 UBL5Q9BZL1 73 aa1.68□□□□□ -2.14
GCFC2-205ENST00000470197 PLAC4Q8WY50 150 aa1.67□□□□□ -2.14
GCFC2-205ENST00000470197 SPRR2FQ96RM1 72 aa1.67□□□□□ -2.14
GCFC2-205ENST00000470197 NDUFC1O43677 76 aa1.66□□□□□ -2.14
GCFC2-205ENST00000470197 KLKP1Q107X0 134 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms