RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 TNXBP22105 4242 aa5.44□□□□□ -1.54
SMC4-210ENST00000469762 A0A1B0GU33 70 aa5.44□□□□□ -1.54
SMC4-210ENST00000469762 H1FX-AS1Q4G0G2 97 aa5.44□□□□□ -1.54
SMC4-210ENST00000469762 HSPG2P98160 4391 aa5.42□□□□□ -1.54
SMC4-210ENST00000469762 A0A0D9SG42 100 aa5.4□□□□□ -1.55
SMC4-210ENST00000469762 KRTAP25-1Q3LHN0 102 aa5.38□□□□□ -1.55
SMC4-210ENST00000469762 LRP1Q07954 4544 aaKnown RBP5.38□□□□□ -1.55
SMC4-210ENST00000469762 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
SMC4-210ENST00000469762 COX6B2Q6YFQ2 88 aa5.38□□□□□ -1.55
SMC4-210ENST00000469762 NDUFAF8A1L188 74 aa5.36□□□□□ -1.55
SMC4-210ENST00000469762 A0A1B0GVY2 172 aa5.35□□□□□ -1.55
SMC4-210ENST00000469762 LCE2BO14633 110 aa5.34□□□□□ -1.55
SMC4-210ENST00000469762 KRTAP10-6P60371 365 aaPredicted RBP5.34□□□□□ -1.55
SMC4-210ENST00000469762 KRTAP13-4Q3LI77 160 aa5.32□□□□□ -1.56
SMC4-210ENST00000469762 J3QL48 77 aa5.32□□□□□ -1.56
SMC4-210ENST00000469762 ROMO1P60602 79 aa5.31□□□□□ -1.56
SMC4-210ENST00000469762 MYCBP2O75592 4640 aa5.29□□□□□ -1.56
SMC4-210ENST00000469762 KRTAP10-8P60410 259 aa5.28□□□□□ -1.56
SMC4-210ENST00000469762 LPAP08519 4548 aa5.24□□□□□ -1.57
SMC4-210ENST00000469762 EPPK1P58107 5090 aaKnown RBP5.24□□□□□ -1.57
SMC4-210ENST00000469762 LCE2AQ5TA79 106 aaPredicted RBP5.21□□□□□ -1.58
SMC4-210ENST00000469762 RYR1P21817 5038 aa5.21□□□□□ -1.58
SMC4-210ENST00000469762 TPRXLQ17RH7 258 aa5.2□□□□□ -1.58
SMC4-210ENST00000469762 P0C880 135 aa5.19□□□□□ -1.58
SMC4-210ENST00000469762 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
SMC4-210ENST00000469762 XP32Q5T750 250 aa5.18□□□□□ -1.58
SMC4-210ENST00000469762 LCE2CQ5TA81 110 aa5.18□□□□□ -1.58
SMC4-210ENST00000469762 KRTAP17-1Q9BYP8 105 aa5.18□□□□□ -1.58
SMC4-210ENST00000469762 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
SMC4-210ENST00000469762 S4R3F8 94 aa5.14□□□□□ -1.59
SMC4-210ENST00000469762 KRTAP12-2P59991 146 aa5.13□□□□□ -1.59
SMC4-210ENST00000469762 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
SMC4-210ENST00000469762 LRP2P98164 4655 aa5.11□□□□□ -1.59
SMC4-210ENST00000469762 KRTAP12-1P59990 96 aa5.07□□□□□ -1.6
SMC4-210ENST00000469762 ABCA13Q86UQ4 5058 aa5.06□□□□□ -1.6
SMC4-210ENST00000469762 Q5VSD8 79 aa5.05□□□□□ -1.6
SMC4-210ENST00000469762 MT1HL1P0DM35 61 aa5.04□□□□□ -1.6
SMC4-210ENST00000469762 LORP23490 312 aaPredicted RBP5.03□□□□□ -1.6
SMC4-210ENST00000469762 KIAA1109Q2LD37 5005 aa5.02□□□□□ -1.61
SMC4-210ENST00000469762 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
SMC4-210ENST00000469762 M0QZ58 72 aa4.91□□□□□ -1.62
SMC4-210ENST00000469762 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
SMC4-210ENST00000469762 HERC2O95714 4834 aa4.88□□□□□ -1.63
SMC4-210ENST00000469762 BIRC6Q9NR09 4857 aa4.8□□□□□ -1.64
SMC4-210ENST00000469762 PCLOQ9Y6V0 5065 aa4.79□□□□□ -1.64
SMC4-210ENST00000469762 KRTAP4-1Q9BYQ7 146 aa4.79□□□□□ -1.64
SMC4-210ENST00000469762 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
SMC4-210ENST00000469762 KRTAP19-2Q3LHN2 52 aa4.76□□□□□ -1.65
SMC4-210ENST00000469762 R4GN34 69 aa4.76□□□□□ -1.65
SMC4-210ENST00000469762 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
SMC4-210ENST00000469762 CAMK2N1Q7Z7J9 78 aa4.69□□□□□ -1.66
SMC4-210ENST00000469762 MUC2Q02817 5179 aa4.69□□□□□ -1.66
SMC4-210ENST00000469762 PLAC4Q8WY50 150 aa4.65□□□□□ -1.67
SMC4-210ENST00000469762 HMCN2Q8NDA2 5059 aa4.63□□□□□ -1.67
SMC4-210ENST00000469762 SEC61BP60468 96 aaKnown RBP4.62□□□□□ -1.67
SMC4-210ENST00000469762 HERC1Q15751 4861 aa4.61□□□□□ -1.67
SMC4-210ENST00000469762 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
SMC4-210ENST00000469762 FAT4Q6V0I7 4981 aa4.43□□□□□ -1.7
SMC4-210ENST00000469762 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
SMC4-210ENST00000469762 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
SMC4-210ENST00000469762 TNP1P09430 55 aa4.37□□□□□ -1.71
SMC4-210ENST00000469762 UBR4Q5T4S7 5183 aa4.35□□□□□ -1.71
SMC4-210ENST00000469762 KRTAP19-1Q8IUB9 90 aa4.34□□□□□ -1.71
SMC4-210ENST00000469762 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
SMC4-210ENST00000469762 RNF213Q63HN8 5207 aa4.3□□□□□ -1.72
SMC4-210ENST00000469762 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
SMC4-210ENST00000469762 MT1FP04733 61 aa4.19□□□□□ -1.74
SMC4-210ENST00000469762 MT1HP80294 61 aa4.19□□□□□ -1.74
SMC4-210ENST00000469762 MT2AP02795 61 aa4.16□□□□□ -1.74
SMC4-210ENST00000469762 KRTAP9-8Q9BYQ0 159 aa4.15□□□□□ -1.74
SMC4-210ENST00000469762 KRTAP8-1Q8IUC2 63 aa4.11□□□□□ -1.75
SMC4-210ENST00000469762 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
SMC4-210ENST00000469762 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
SMC4-210ENST00000469762 M0R2T5 61 aa4.1□□□□□ -1.75
SMC4-210ENST00000469762 MT1BP07438 61 aa4.09□□□□□ -1.75
SMC4-210ENST00000469762 MT1XP80297 61 aa4.09□□□□□ -1.75
SMC4-210ENST00000469762 KRTAP10-10P60014 251 aa4.08□□□□□ -1.76
SMC4-210ENST00000469762 PRO2289Q9P1D8 64 aa4.03□□□□□ -1.76
SMC4-210ENST00000469762 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
SMC4-210ENST00000469762 KRTAP10-12P60413 245 aa3.99□□□□□ -1.77
SMC4-210ENST00000469762 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
SMC4-210ENST00000469762 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
SMC4-210ENST00000469762 KMT2DO14686 5537 aa3.86□□□□□ -1.79
SMC4-210ENST00000469762 USH2AO75445 5202 aa3.84□□□□□ -1.79
SMC4-210ENST00000469762 INE1O15225 51 aa3.83□□□□□ -1.8
SMC4-210ENST00000469762 KRTAP19-5Q3LI72 72 aa3.81□□□□□ -1.8
SMC4-210ENST00000469762 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.81
SMC4-210ENST00000469762 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
SMC4-210ENST00000469762 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
SMC4-210ENST00000469762 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
SMC4-210ENST00000469762 KRTAP4-8A0A0G2JLE6 195 aa3.74□□□□□ -1.81
SMC4-210ENST00000469762 KRTAP4-8Q9BYQ9 185 aa3.74□□□□□ -1.81
SMC4-210ENST00000469762 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.81
SMC4-210ENST00000469762 SSPOA2VEC9 5147 aa3.69□□□□□ -1.82
SMC4-210ENST00000469762 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
SMC4-210ENST00000469762 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
SMC4-210ENST00000469762 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
SMC4-210ENST00000469762 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
SMC4-210ENST00000469762 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
SMC4-210ENST00000469762 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms