RNA–Protein interactions for RNA: ENST00000469102.1

CMC1-208, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 788 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-208ENST00000469102 CUBNO60494 3623 aa0.04□□□□□ -2.4
CMC1-208ENST00000469102 WDR87Q6ZQQ6 2873 aa0.04□□□□□ -2.4
CMC1-208ENST00000469102 LRP1BQ9NZR2 4599 aa0.03□□□□□ -2.4
CMC1-208ENST00000469102 DEFB1P60022 68 aa0.03□□□□□ -2.4
CMC1-208ENST00000469102 SNRPGP62308 76 aaKnown RBP0.03□□□□□ -2.4
CMC1-208ENST00000469102 LAMA1P25391 3075 aa0.02□□□□□ -2.41
CMC1-208ENST00000469102 ITPR1Q14643 2758 aa0.02□□□□□ -2.41
CMC1-208ENST00000469102 AKAP9Q99996 3911 aa0.02□□□□□ -2.41
CMC1-208ENST00000469102 FRYQ5TBA9 3013 aa0.02□□□□□ -2.41
CMC1-208ENST00000469102 TOMM7Q9P0U1 55 aa0.02□□□□□ -2.41
CMC1-208ENST00000469102 USP9YO00507 2555 aaPredicted RBP0.01□□□□□ -2.41
CMC1-208ENST00000469102 SACSQ9NZJ4 4579 aa0.01□□□□□ -2.41
CMC1-208ENST00000469102 RPL39P62891 51 aaKnown RBP0.01□□□□□ -2.41
CMC1-208ENST00000469102 RANBP2P49792 3224 aaKnown RBP0.01□□□□□ -2.41
CMC1-208ENST00000469102 DNAH9Q9NYC9 4486 aa0.01□□□□□ -2.41
CMC1-208ENST00000469102 SPTAN1Q13813 2472 aaKnown RBP0.01□□□□□ -2.41
CMC1-208ENST00000469102 DNAH3Q8TD57 4116 aa0□□□□□ -2.41
CMC1-208ENST00000469102 SMR3BP02814 79 aaPredicted RBP0□□□□□ -2.41
CMC1-208ENST00000469102 KRTAP19-5Q3LI72 72 aa0□□□□□ -2.41
CMC1-208ENST00000469102 KRTAP19-7Q3SYF9 63 aa0□□□□□ -2.41
CMC1-208ENST00000469102 PKHD1L1Q86WI1 4243 aa-0□□□□□ -2.41
CMC1-208ENST00000469102 CELSR3Q9NYQ7 3312 aa-0□□□□□ -2.41
CMC1-208ENST00000469102 ANK3Q12955 4377 aaKnown RBP-0.01□□□□□ -2.41
CMC1-208ENST00000469102 MUC12Q9UKN1 5478 aa-0.01□□□□□ -2.41
CMC1-208ENST00000469102 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
CMC1-208ENST00000469102 LAMA5O15230 3695 aa-0.01□□□□□ -2.41
CMC1-208ENST00000469102 ITPR3Q14573 2671 aa-0.01□□□□□ -2.41
CMC1-208ENST00000469102 MROH2BQ7Z745 1585 aa-0.02□□□□□ -2.41
CMC1-208ENST00000469102 CHD7Q9P2D1 2997 aa-0.02□□□□□ -2.41
CMC1-208ENST00000469102 TRIOO75962 3097 aa-0.02□□□□□ -2.41
CMC1-208ENST00000469102 MT1HP80294 61 aa-0.03□□□□□ -2.41
CMC1-208ENST00000469102 LINC01590Q5TEZ4 76 aa-0.03□□□□□ -2.41
CMC1-208ENST00000469102 RPL39LQ96EH5 51 aaKnown RBP-0.03□□□□□ -2.41
CMC1-208ENST00000469102 NBPF19A0A087WUL8 3843 aa-0.04□□□□□ -2.42
CMC1-208ENST00000469102 DUOX1Q9NRD9 1551 aa-0.05□□□□□ -2.42
CMC1-208ENST00000469102 ADGRG4Q8IZF6 3080 aa-0.05□□□□□ -2.42
CMC1-208ENST00000469102 KRTAP19-8Q3LI54 63 aa-0.05□□□□□ -2.42
CMC1-208ENST00000469102 LEAP2Q969E1 77 aa-0.05□□□□□ -2.42
CMC1-208ENST00000469102 DOPEY1Q5JWR5 2465 aa-0.05□□□□□ -2.42
CMC1-208ENST00000469102 DNAH2Q9P225 4427 aa-0.05□□□□□ -2.42
CMC1-208ENST00000469102 FAT3Q8TDW7 4589 aa-0.06□□□□□ -2.42
CMC1-208ENST00000469102 LRBAP50851 2863 aa-0.06□□□□□ -2.42
CMC1-208ENST00000469102 DNAH6Q9C0G6 4158 aa-0.06□□□□□ -2.42
CMC1-208ENST00000469102 PCLOQ9Y6V0 5065 aa-0.06□□□□□ -2.42
CMC1-208ENST00000469102 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.06□□□□□ -2.42
CMC1-208ENST00000469102 DNAH1Q9P2D7 4330 aa-0.07□□□□□ -2.42
CMC1-208ENST00000469102 GCC2Q8IWJ2 1684 aa-0.07□□□□□ -2.42
CMC1-208ENST00000469102 CRYBG3Q68DQ2 2970 aa-0.07□□□□□ -2.42
CMC1-208ENST00000469102 C5orf42Q9H799 3197 aa-0.08□□□□□ -2.42
CMC1-208ENST00000469102 MYO9AB2RTY4 2548 aa-0.08□□□□□ -2.42
CMC1-208ENST00000469102 SPENQ96T58 3664 aaKnown RBP-0.08□□□□□ -2.42
CMC1-208ENST00000469102 APOBP04114 4563 aaKnown RBP-0.09□□□□□ -2.42
CMC1-208ENST00000469102 DEFB136Q30KP8 78 aa-0.09□□□□□ -2.42
CMC1-208ENST00000469102 DNAH11Q96DT5 4516 aa-0.09□□□□□ -2.42
CMC1-208ENST00000469102 SPTBN5Q9NRC6 3674 aaKnown RBP-0.1□□□□□ -2.42
CMC1-208ENST00000469102 MT1EP04732 61 aa-0.1□□□□□ -2.43
CMC1-208ENST00000469102 TEX15Q9BXT5 2789 aa-0.1□□□□□ -2.43
CMC1-208ENST00000469102 DNAH8Q96JB1 4490 aa-0.1□□□□□ -2.43
CMC1-208ENST00000469102 MGAQ8IWI9 3026 aa-0.11□□□□□ -2.43
CMC1-208ENST00000469102 CFAP46Q8IYW2 2715 aa-0.11□□□□□ -2.43
CMC1-208ENST00000469102 RHPN1-AS1Q9BWJ2 59 aa-0.11□□□□□ -2.43
CMC1-208ENST00000469102 MUC2Q02817 5179 aa-0.11□□□□□ -2.43
CMC1-208ENST00000469102 VPS13DQ5THJ4 4388 aa-0.11□□□□□ -2.43
CMC1-208ENST00000469102 DNAH7Q8WXX0 4024 aa-0.12□□□□□ -2.43
CMC1-208ENST00000469102 LAMA3Q16787 3333 aa-0.12□□□□□ -2.43
CMC1-208ENST00000469102 FAT1Q14517 4588 aa-0.13□□□□□ -2.43
CMC1-208ENST00000469102 MT1LQ93083 61 aa-0.13□□□□□ -2.43
CMC1-208ENST00000469102 NEBP20929 6669 aa-0.13□□□□□ -2.43
CMC1-208ENST00000469102 DMXL2Q8TDJ6 3036 aa-0.13□□□□□ -2.43
CMC1-208ENST00000469102 CEP250Q9BV73 2442 aa-0.14□□□□□ -2.43
CMC1-208ENST00000469102 MT1XP80297 61 aa-0.14□□□□□ -2.43
CMC1-208ENST00000469102 ARHGAP5-AS1Q96IT6 56 aa-0.14□□□□□ -2.43
CMC1-208ENST00000469102 SRCAPQ6ZRS2 3230 aa-0.15□□□□□ -2.43
CMC1-208ENST00000469102 RELNP78509 3460 aa-0.15□□□□□ -2.43
CMC1-208ENST00000469102 HERC1Q15751 4861 aa-0.15□□□□□ -2.43
CMC1-208ENST00000469102 STARD9Q9P2P6 4700 aa-0.15□□□□□ -2.43
CMC1-208ENST00000469102 TLN1Q9Y490 2541 aaKnown RBP-0.16□□□□□ -2.43
CMC1-208ENST00000469102 ZFHX4Q86UP3 3567 aa-0.16□□□□□ -2.43
CMC1-208ENST00000469102 KMT2CQ8NEZ4 4911 aaKnown RBP-0.16□□□□□ -2.43
CMC1-208ENST00000469102 MT4P47944 62 aa-0.16□□□□□ -2.44
CMC1-208ENST00000469102 MUC17Q685J3 4493 aa-0.17□□□□□ -2.44
CMC1-208ENST00000469102 KRTAP20-2Q3LI61 65 aa-0.17□□□□□ -2.44
CMC1-208ENST00000469102 DEFB104AQ8WTQ1 72 aa-0.17□□□□□ -2.44
CMC1-208ENST00000469102 CSMD1Q96PZ7 3565 aa-0.17□□□□□ -2.44
CMC1-208ENST00000469102 ITPR2Q14571 2701 aa-0.17□□□□□ -2.44
CMC1-208ENST00000469102 CMYA5Q8N3K9 4069 aa-0.18□□□□□ -2.44
CMC1-208ENST00000469102 K7EIM0 57 aa-0.18□□□□□ -2.44
CMC1-208ENST00000469102 LAMA2P24043 3122 aaKnown RBP-0.18□□□□□ -2.44
CMC1-208ENST00000469102 PRCDQ00LT1 54 aa-0.19□□□□□ -2.44
CMC1-208ENST00000469102 NIPBLQ6KC79 2804 aaeCLIP-0.2□□□□□ -2.44
CMC1-208ENST00000469102 CFAP54Q96N23 3096 aa-0.2□□□□□ -2.44
CMC1-208ENST00000469102 PLECQ15149 4684 aaKnown RBP-0.2□□□□□ -2.44
CMC1-208ENST00000469102 DEFB4AO15263 64 aa-0.2□□□□□ -2.44
CMC1-208ENST00000469102 A0A096LNI7 61 aa-0.21□□□□□ -2.44
CMC1-208ENST00000469102 H3BUX3 64 aa-0.21□□□□□ -2.44
CMC1-208ENST00000469102 UBR4Q5T4S7 5183 aa-0.21□□□□□ -2.44
CMC1-208ENST00000469102 TRRAPQ9Y4A5 3859 aa-0.22□□□□□ -2.44
CMC1-208ENST00000469102 CEP295Q9C0D2 2601 aa-0.22□□□□□ -2.44
CMC1-208ENST00000469102 DEFB133Q30KQ1 61 aa-0.22□□□□□ -2.44
CMC1-208ENST00000469102 DNAH17Q9UFH2 4485 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms