RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 LRP1Q07954 4544 aaKnown RBP0.66□□□□□ -2.3
CDHR3-206ENST00000468477 FLGP20930 4061 aaPredicted RBP0.66□□□□□ -2.3
CDHR3-206ENST00000468477 HRNRQ86YZ3 2850 aaPredicted RBP0.66□□□□□ -2.3
CDHR3-206ENST00000468477 MAST4O15021 2626 aa0.66□□□□□ -2.3
CDHR3-206ENST00000468477 LPAP08519 4548 aa0.65□□□□□ -2.31
CDHR3-206ENST00000468477 ZANQ9Y493 2812 aa0.65□□□□□ -2.31
CDHR3-206ENST00000468477 KALRNO60229 2985 aa0.64□□□□□ -2.31
CDHR3-206ENST00000468477 DNAH6Q9C0G6 4158 aa0.64□□□□□ -2.31
CDHR3-206ENST00000468477 DEFB1P60022 68 aa0.64□□□□□ -2.31
CDHR3-206ENST00000468477 DNAH9Q9NYC9 4486 aa0.64□□□□□ -2.31
CDHR3-206ENST00000468477 AHNAK2Q8IVF2 5795 aa0.64□□□□□ -2.31
CDHR3-206ENST00000468477 HSPG2P98160 4391 aa0.64□□□□□ -2.31
CDHR3-206ENST00000468477 DNAH8Q96JB1 4490 aa0.63□□□□□ -2.31
CDHR3-206ENST00000468477 DEFB136Q30KP8 78 aa0.63□□□□□ -2.31
CDHR3-206ENST00000468477 KRTAP6-2Q3LI66 62 aa0.63□□□□□ -2.31
CDHR3-206ENST00000468477 TGP01266 2768 aa0.62□□□□□ -2.31
CDHR3-206ENST00000468477 TENM3Q9P273 2699 aa0.62□□□□□ -2.31
CDHR3-206ENST00000468477 HTN1P15515 57 aa0.62□□□□□ -2.31
CDHR3-206ENST00000468477 ITPR1Q14643 2758 aa0.62□□□□□ -2.31
CDHR3-206ENST00000468477 SPTAN1Q13813 2472 aaKnown RBP0.61□□□□□ -2.31
CDHR3-206ENST00000468477 LAMA5O15230 3695 aa0.61□□□□□ -2.31
CDHR3-206ENST00000468477 MT1AP04731 61 aa0.61□□□□□ -2.31
CDHR3-206ENST00000468477 SPRR2AP35326 72 aa0.61□□□□□ -2.31
CDHR3-206ENST00000468477 DOPEY1Q5JWR5 2465 aa0.61□□□□□ -2.31
CDHR3-206ENST00000468477 MGAM2Q2M2H8 2515 aa0.61□□□□□ -2.31
CDHR3-206ENST00000468477 AKAP9Q99996 3911 aa0.6□□□□□ -2.31
CDHR3-206ENST00000468477 SPTBN5Q9NRC6 3674 aaKnown RBP0.6□□□□□ -2.31
CDHR3-206ENST00000468477 CFAP54Q96N23 3096 aa0.59□□□□□ -2.31
CDHR3-206ENST00000468477 SMR3BP02814 79 aaPredicted RBP0.59□□□□□ -2.31
CDHR3-206ENST00000468477 KRTAP5-10Q6L8G5 202 aa0.59□□□□□ -2.31
CDHR3-206ENST00000468477 FLNAP21333 2647 aaKnown RBP0.59□□□□□ -2.32
CDHR3-206ENST00000468477 MXRA5Q9NR99 2828 aa0.58□□□□□ -2.32
CDHR3-206ENST00000468477 DEFB124Q8NES8 71 aa0.58□□□□□ -2.32
CDHR3-206ENST00000468477 PKHD1P08F94 4074 aa0.58□□□□□ -2.32
CDHR3-206ENST00000468477 RELNP78509 3460 aa0.58□□□□□ -2.32
CDHR3-206ENST00000468477 APOBP04114 4563 aaKnown RBP0.57□□□□□ -2.32
CDHR3-206ENST00000468477 WDR87Q6ZQQ6 2873 aa0.57□□□□□ -2.32
CDHR3-206ENST00000468477 DMXL2Q8TDJ6 3036 aa0.56□□□□□ -2.32
CDHR3-206ENST00000468477 KRTAP19-5Q3LI72 72 aa0.56□□□□□ -2.32
CDHR3-206ENST00000468477 LAMA1P25391 3075 aa0.56□□□□□ -2.32
CDHR3-206ENST00000468477 FAT3Q8TDW7 4589 aa0.55□□□□□ -2.32
CDHR3-206ENST00000468477 DNAH1Q9P2D7 4330 aa0.55□□□□□ -2.32
CDHR3-206ENST00000468477 COL6A3P12111 3177 aa0.55□□□□□ -2.32
CDHR3-206ENST00000468477 CSMD1Q96PZ7 3565 aa0.55□□□□□ -2.32
CDHR3-206ENST00000468477 SVEP1Q4LDE5 3571 aa0.55□□□□□ -2.32
CDHR3-206ENST00000468477 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
CDHR3-206ENST00000468477 HTTP42858 3142 aa0.54□□□□□ -2.32
CDHR3-206ENST00000468477 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
CDHR3-206ENST00000468477 LAMA3Q16787 3333 aa0.54□□□□□ -2.32
CDHR3-206ENST00000468477 GPR98Q8WXG9 6306 aa0.54□□□□□ -2.32
CDHR3-206ENST00000468477 LRBAP50851 2863 aa0.53□□□□□ -2.32
CDHR3-206ENST00000468477 SPRR2EP22531 72 aa0.53□□□□□ -2.32
CDHR3-206ENST00000468477 SPRR2FQ96RM1 72 aa0.53□□□□□ -2.32
CDHR3-206ENST00000468477 MAP1AP78559 2803 aaPredicted RBP0.53□□□□□ -2.32
CDHR3-206ENST00000468477 DNAH10Q8IVF4 4471 aa0.53□□□□□ -2.33
CDHR3-206ENST00000468477 ADGRG4Q8IZF6 3080 aa0.53□□□□□ -2.33
CDHR3-206ENST00000468477 TEX15Q9BXT5 2789 aa0.52□□□□□ -2.33
CDHR3-206ENST00000468477 DEFB133Q30KQ1 61 aa0.52□□□□□ -2.33
CDHR3-206ENST00000468477 LRP1BQ9NZR2 4599 aa0.52□□□□□ -2.33
CDHR3-206ENST00000468477 CFAP46Q8IYW2 2715 aa0.51□□□□□ -2.33
CDHR3-206ENST00000468477 TRIOO75962 3097 aa0.51□□□□□ -2.33
CDHR3-206ENST00000468477 FAT4Q6V0I7 4981 aa0.51□□□□□ -2.33
CDHR3-206ENST00000468477 ATMQ13315 3056 aa0.51□□□□□ -2.33
CDHR3-206ENST00000468477 NIPBLQ6KC79 2804 aaeCLIP0.51□□□□□ -2.33
CDHR3-206ENST00000468477 NBEAL1Q6ZS30 2694 aa0.51□□□□□ -2.33
CDHR3-206ENST00000468477 CMYA5Q8N3K9 4069 aa0.51□□□□□ -2.33
CDHR3-206ENST00000468477 STAB2Q8WWQ8 2551 aa0.51□□□□□ -2.33
CDHR3-206ENST00000468477 HMCN2Q8NDA2 5059 aa0.49□□□□□ -2.33
CDHR3-206ENST00000468477 PLECQ15149 4684 aaKnown RBP0.49□□□□□ -2.33
CDHR3-206ENST00000468477 PRUNE2Q8WUY3 3088 aa0.49□□□□□ -2.33
CDHR3-206ENST00000468477 FRYLO94915 3013 aa0.49□□□□□ -2.33
CDHR3-206ENST00000468477 FAT1Q14517 4588 aa0.48□□□□□ -2.33
CDHR3-206ENST00000468477 STATHP02808 62 aa0.48□□□□□ -2.33
CDHR3-206ENST00000468477 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
CDHR3-206ENST00000468477 ITPR2Q14571 2701 aa0.47□□□□□ -2.33
CDHR3-206ENST00000468477 C5orf42Q9H799 3197 aa0.46□□□□□ -2.34
CDHR3-206ENST00000468477 TLN1Q9Y490 2541 aaKnown RBP0.46□□□□□ -2.34
CDHR3-206ENST00000468477 SMG1Q96Q15 3661 aaKnown RBP0.45□□□□□ -2.34
CDHR3-206ENST00000468477 HERC1Q15751 4861 aa0.44□□□□□ -2.34
CDHR3-206ENST00000468477 A0A096LPF7 62 aa0.44□□□□□ -2.34
CDHR3-206ENST00000468477 TRRAPQ9Y4A5 3859 aa0.44□□□□□ -2.34
CDHR3-206ENST00000468477 DNAH12Q6ZR08 3092 aa0.44□□□□□ -2.34
CDHR3-206ENST00000468477 CEP295Q9C0D2 2601 aa0.42□□□□□ -2.34
CDHR3-206ENST00000468477 RPS29P62273 56 aaKnown RBP0.42□□□□□ -2.34
CDHR3-206ENST00000468477 DEFB108BQ8NET1 73 aa0.41□□□□□ -2.34
CDHR3-206ENST00000468477 DMDP11532 3685 aa0.41□□□□□ -2.34
CDHR3-206ENST00000468477 MYO9AB2RTY4 2548 aa0.39□□□□□ -2.35
CDHR3-206ENST00000468477 DNAH17Q9UFH2 4485 aa0.39□□□□□ -2.35
CDHR3-206ENST00000468477 LINC01556Q5JQF7 62 aa0.39□□□□□ -2.35
CDHR3-206ENST00000468477 DNAH5Q8TE73 4624 aa0.39□□□□□ -2.35
CDHR3-206ENST00000468477 LRP2P98164 4655 aa0.39□□□□□ -2.35
CDHR3-206ENST00000468477 CD52P31358 61 aa0.38□□□□□ -2.35
CDHR3-206ENST00000468477 SZT2Q5T011 3432 aa0.38□□□□□ -2.35
CDHR3-206ENST00000468477 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
CDHR3-206ENST00000468477 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
CDHR3-206ENST00000468477 DYNC1H1Q14204 4646 aaKnown RBP0.36□□□□□ -2.35
CDHR3-206ENST00000468477 CENPEQ02224 2701 aa0.36□□□□□ -2.35
CDHR3-206ENST00000468477 FREM2Q5SZK8 3169 aa0.35□□□□□ -2.35
CDHR3-206ENST00000468477 MKI67P46013 3256 aaKnown RBP0.35□□□□□ -2.35
CDHR3-206ENST00000468477 SYNE2Q8WXH0 6885 aaKnown RBP0.34□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms