RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 KRTAP15-1Q3LI76 137 aa3.31□□□□□ -1.88
PSMD6-204ENST00000467853 PKD1P98161 4303 aa3.28□□□□□ -1.88
PSMD6-204ENST00000467853 KRTAP10-4P60372 401 aaPredicted RBP3.28□□□□□ -1.88
PSMD6-204ENST00000467853 A0A1B0GVY2 172 aa3.28□□□□□ -1.88
PSMD6-204ENST00000467853 CRIPTQ9P021 101 aa3.27□□□□□ -1.89
PSMD6-204ENST00000467853 VPS13BQ7Z7G8 4022 aa3.27□□□□□ -1.89
PSMD6-204ENST00000467853 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
PSMD6-204ENST00000467853 A0A0D9SG42 100 aa3.26□□□□□ -1.89
PSMD6-204ENST00000467853 SPINT4Q6UDR6 99 aa3.26□□□□□ -1.89
PSMD6-204ENST00000467853 KRTAP21-3Q3LHN1 58 aa3.25□□□□□ -1.89
PSMD6-204ENST00000467853 FAT2Q9NYQ8 4349 aa3.24□□□□□ -1.89
PSMD6-204ENST00000467853 KRTAP10-8P60410 259 aa3.23□□□□□ -1.89
PSMD6-204ENST00000467853 PKHD1L1Q86WI1 4243 aa3.21□□□□□ -1.89
PSMD6-204ENST00000467853 M0QZ58 72 aa3.21□□□□□ -1.9
PSMD6-204ENST00000467853 KRTAP13-4Q3LI77 160 aa3.21□□□□□ -1.9
PSMD6-204ENST00000467853 TPRXLQ17RH7 258 aa3.19□□□□□ -1.9
PSMD6-204ENST00000467853 APOBP04114 4563 aaKnown RBP3.19□□□□□ -1.9
PSMD6-204ENST00000467853 FLG2Q5D862 2391 aaPredicted RBP3.18□□□□□ -1.9
PSMD6-204ENST00000467853 P0C880 135 aa3.18□□□□□ -1.9
PSMD6-204ENST00000467853 Q5VSD8 79 aa3.18□□□□□ -1.9
PSMD6-204ENST00000467853 DYNC1H1Q14204 4646 aaKnown RBP3.17□□□□□ -1.9
PSMD6-204ENST00000467853 HYDINQ4G0P3 5121 aa3.17□□□□□ -1.9
PSMD6-204ENST00000467853 PKHD1P08F94 4074 aa3.16□□□□□ -1.9
PSMD6-204ENST00000467853 KRTAP12-1P59990 96 aa3.14□□□□□ -1.91
PSMD6-204ENST00000467853 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
PSMD6-204ENST00000467853 DMBT1Q9UGM3 2413 aaPredicted RBP3.14□□□□□ -1.91
PSMD6-204ENST00000467853 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
PSMD6-204ENST00000467853 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
PSMD6-204ENST00000467853 FAT3Q8TDW7 4589 aa3.1□□□□□ -1.91
PSMD6-204ENST00000467853 FAT1Q14517 4588 aa3.1□□□□□ -1.91
PSMD6-204ENST00000467853 DNHD1Q96M86 4753 aa3.09□□□□□ -1.91
PSMD6-204ENST00000467853 LOC100996750A0A140TA64 210 aa3.08□□□□□ -1.92
PSMD6-204ENST00000467853 KRTAP4-6Q9BYQ5 205 aa3.08□□□□□ -1.92
PSMD6-204ENST00000467853 R4GN34 69 aa3.08□□□□□ -1.92
PSMD6-204ENST00000467853 TNXBP22105 4242 aa3.07□□□□□ -1.92
PSMD6-204ENST00000467853 LRP1Q07954 4544 aaKnown RBP3.05□□□□□ -1.92
PSMD6-204ENST00000467853 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
PSMD6-204ENST00000467853 MT1HL1P0DM35 61 aa3.05□□□□□ -1.92
PSMD6-204ENST00000467853 HSPG2P98160 4391 aa3.03□□□□□ -1.92
PSMD6-204ENST00000467853 PP632Q6XCG6 107 aa3.01□□□□□ -1.93
PSMD6-204ENST00000467853 KRTAP9-2Q9BYQ4 174 aa3□□□□□ -1.93
PSMD6-204ENST00000467853 PLAC4Q8WY50 150 aa2.99□□□□□ -1.93
PSMD6-204ENST00000467853 RYR2Q92736 4967 aa2.99□□□□□ -1.93
PSMD6-204ENST00000467853 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.97□□□□□ -1.93
PSMD6-204ENST00000467853 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
PSMD6-204ENST00000467853 KRTAP4-8Q9BYQ9 185 aa2.96□□□□□ -1.94
PSMD6-204ENST00000467853 CAMK2N1Q7Z7J9 78 aa2.95□□□□□ -1.94
PSMD6-204ENST00000467853 KRTAP19-1Q8IUB9 90 aa2.95□□□□□ -1.94
PSMD6-204ENST00000467853 MYCBP2O75592 4640 aa2.93□□□□□ -1.94
PSMD6-204ENST00000467853 RYR1P21817 5038 aa2.93□□□□□ -1.94
PSMD6-204ENST00000467853 KRTAP9-7A8MTY7 169 aa2.93□□□□□ -1.94
PSMD6-204ENST00000467853 KRTAP17-1Q9BYP8 105 aa2.88□□□□□ -1.95
PSMD6-204ENST00000467853 TNP1P09430 55 aa2.87□□□□□ -1.95
PSMD6-204ENST00000467853 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
PSMD6-204ENST00000467853 KMT2CQ8NEZ4 4911 aaKnown RBP2.84□□□□□ -1.95
PSMD6-204ENST00000467853 LRP2P98164 4655 aa2.81□□□□□ -1.96
PSMD6-204ENST00000467853 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
PSMD6-204ENST00000467853 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
PSMD6-204ENST00000467853 KRTAP9-4Q9BYQ2 154 aa2.81□□□□□ -1.96
PSMD6-204ENST00000467853 KRTAP4-1Q9BYQ7 146 aa2.81□□□□□ -1.96
PSMD6-204ENST00000467853 RYR3Q15413 4870 aa2.8□□□□□ -1.96
PSMD6-204ENST00000467853 KRTAP19-2Q3LHN2 52 aa2.78□□□□□ -1.96
PSMD6-204ENST00000467853 KIAA1109Q2LD37 5005 aa2.77□□□□□ -1.97
PSMD6-204ENST00000467853 KRTAP4-5Q9BYR2 181 aa2.76□□□□□ -1.97
PSMD6-204ENST00000467853 LPAP08519 4548 aa2.76□□□□□ -1.97
PSMD6-204ENST00000467853 MUC17Q685J3 4493 aa2.76□□□□□ -1.97
PSMD6-204ENST00000467853 KRTAP4-8A0A0G2JLE6 195 aa2.75□□□□□ -1.97
PSMD6-204ENST00000467853 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
PSMD6-204ENST00000467853 LCE5AQ5TCM9 118 aa2.73□□□□□ -1.97
PSMD6-204ENST00000467853 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
PSMD6-204ENST00000467853 HERC1Q15751 4861 aa2.7□□□□□ -1.98
PSMD6-204ENST00000467853 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
PSMD6-204ENST00000467853 FLGP20930 4061 aaPredicted RBP2.66□□□□□ -1.98
PSMD6-204ENST00000467853 M0R2T5 61 aa2.66□□□□□ -1.98
PSMD6-204ENST00000467853 ABCA13Q86UQ4 5058 aa2.65□□□□□ -1.99
PSMD6-204ENST00000467853 KRTAP9-3Q9BYQ3 159 aa2.64□□□□□ -1.99
PSMD6-204ENST00000467853 MT3P25713 68 aa2.64□□□□□ -1.99
PSMD6-204ENST00000467853 EPPK1P58107 5090 aaKnown RBP2.61□□□□□ -1.99
PSMD6-204ENST00000467853 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
PSMD6-204ENST00000467853 BIRC6Q9NR09 4857 aa2.6□□□□□ -1.99
PSMD6-204ENST00000467853 KRTAP4-7Q9BYR0 210 aa2.6□□□□□ -1.99
PSMD6-204ENST00000467853 INE1O15225 51 aa2.59□□□□□ -1.99
PSMD6-204ENST00000467853 KRTAP10-10P60014 251 aa2.59□□□□□ -1.99
PSMD6-204ENST00000467853 KRTAP8-1Q8IUC2 63 aa2.58□□□□□ -2
PSMD6-204ENST00000467853 PRO2289Q9P1D8 64 aa2.58□□□□□ -2
PSMD6-204ENST00000467853 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
PSMD6-204ENST00000467853 KRTAP4-9Q9BYQ8 210 aa2.56□□□□□ -2
PSMD6-204ENST00000467853 KRTAP19-8Q3LI54 63 aa2.56□□□□□ -2
PSMD6-204ENST00000467853 HERC2O95714 4834 aa2.55□□□□□ -2
PSMD6-204ENST00000467853 MT1HP80294 61 aa2.54□□□□□ -2
PSMD6-204ENST00000467853 MT2AP02795 61 aa2.54□□□□□ -2
PSMD6-204ENST00000467853 MT1FP04733 61 aa2.52□□□□□ -2.01
PSMD6-204ENST00000467853 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
PSMD6-204ENST00000467853 KRTAP10-12P60413 245 aa2.52□□□□□ -2.01
PSMD6-204ENST00000467853 KRTAP9-8Q9BYQ0 159 aa2.48□□□□□ -2.01
PSMD6-204ENST00000467853 KRTAP10-5P60370 271 aa2.47□□□□□ -2.01
PSMD6-204ENST00000467853 MT1XP80297 61 aa2.47□□□□□ -2.01
PSMD6-204ENST00000467853 MT1BP07438 61 aa2.46□□□□□ -2.02
PSMD6-204ENST00000467853 HMCN2Q8NDA2 5059 aa2.43□□□□□ -2.02
PSMD6-204ENST00000467853 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms