RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
PTPRE-206ENST00000467366 A8MUU9 505 aa3.72□□□□□ -1.81
PTPRE-206ENST00000467366 SSPOA2VEC9 5147 aa3.72□□□□□ -1.81
PTPRE-206ENST00000467366 IGKV3OR2-268A0A0C4DH90 116 aa3.71□□□□□ -1.82
PTPRE-206ENST00000467366 USH2AO75445 5202 aa3.71□□□□□ -1.82
PTPRE-206ENST00000467366 ACYP2P14621 99 aa3.7□□□□□ -1.82
PTPRE-206ENST00000467366 KRTAP19-2Q3LHN2 52 aa3.7□□□□□ -1.82
PTPRE-206ENST00000467366 FCGBPQ9Y6R7 5405 aaPredicted RBP3.69□□□□□ -1.82
PTPRE-206ENST00000467366 Q8NBF4 154 aa3.69□□□□□ -1.82
PTPRE-206ENST00000467366 TOMM7Q9P0U1 55 aa3.69□□□□□ -1.82
PTPRE-206ENST00000467366 KRTAP11-1Q8IUC1 163 aa3.68□□□□□ -1.82
PTPRE-206ENST00000467366 GVQW2A0A096LPI5 108 aaPredicted RBP3.67□□□□□ -1.82
PTPRE-206ENST00000467366 HRES1P13985 223 aa3.66□□□□□ -1.82
PTPRE-206ENST00000467366 IGLV5-48A0A075B6I7 105 aa3.65□□□□□ -1.83
PTPRE-206ENST00000467366 K7EQZ3 153 aa3.64□□□□□ -1.83
PTPRE-206ENST00000467366 IGLV6-57P01721 117 aa3.64□□□□□ -1.83
PTPRE-206ENST00000467366 DSCR10P59022 87 aa3.64□□□□□ -1.83
PTPRE-206ENST00000467366 TYMSOSQ8TAI1 123 aa3.64□□□□□ -1.83
PTPRE-206ENST00000467366 A0A1B0GUV1 79 aa3.63□□□□□ -1.83
PTPRE-206ENST00000467366 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
PTPRE-206ENST00000467366 LINC00472Q9H8W2 130 aa3.62□□□□□ -1.83
PTPRE-206ENST00000467366 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
PTPRE-206ENST00000467366 A0A1B0GU33 70 aa3.61□□□□□ -1.83
PTPRE-206ENST00000467366 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
PTPRE-206ENST00000467366 WFDC13Q8IUB5 93 aa3.61□□□□□ -1.83
PTPRE-206ENST00000467366 KRTAP19-1Q8IUB9 90 aa3.61□□□□□ -1.83
PTPRE-206ENST00000467366 M0R2T5 61 aa3.6□□□□□ -1.83
PTPRE-206ENST00000467366 KRTAP13-3Q3SY46 172 aa3.6□□□□□ -1.83
PTPRE-206ENST00000467366 KRTAP13-2Q52LG2 175 aa3.6□□□□□ -1.83
PTPRE-206ENST00000467366 FAM168BA1KXE4 195 aa3.59□□□□□ -1.83
PTPRE-206ENST00000467366 LINC00304Q8N9R0 145 aa3.59□□□□□ -1.83
PTPRE-206ENST00000467366 C6orf48Q9UBA6 75 aa3.59□□□□□ -1.83
PTPRE-206ENST00000467366 ANAPC11Q9NYG5 84 aa3.58□□□□□ -1.84
PTPRE-206ENST00000467366 PCOTHQ58A44 107 aa3.57□□□□□ -1.84
PTPRE-206ENST00000467366 SSBP3-AS1Q7Z2R9 100 aa3.57□□□□□ -1.84
PTPRE-206ENST00000467366 KRTAP7-1Q8IUC3 87 aa3.57□□□□□ -1.84
PTPRE-206ENST00000467366 FLGP20930 4061 aaPredicted RBP3.56□□□□□ -1.84
PTPRE-206ENST00000467366 Q96NJ1 140 aa3.55□□□□□ -1.84
PTPRE-206ENST00000467366 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
PTPRE-206ENST00000467366 A0A0G2JQZ4 141 aa3.51□□□□□ -1.85
PTPRE-206ENST00000467366 DEFB116Q30KQ4 102 aa3.51□□□□□ -1.85
PTPRE-206ENST00000467366 XP32Q5T750 250 aa3.51□□□□□ -1.85
PTPRE-206ENST00000467366 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
PTPRE-206ENST00000467366 LCE2BO14633 110 aa3.48□□□□□ -1.85
PTPRE-206ENST00000467366 Q8N377 158 aa3.48□□□□□ -1.85
PTPRE-206ENST00000467366 KRTAP9-8Q9BYQ0 159 aa3.47□□□□□ -1.85
PTPRE-206ENST00000467366 CRIPTQ9P021 101 aa3.46□□□□□ -1.86
PTPRE-206ENST00000467366 PRO2289Q9P1D8 64 aa3.46□□□□□ -1.86
PTPRE-206ENST00000467366 UNQ6190/PRO20217Q6UXQ8 127 aa3.45□□□□□ -1.86
PTPRE-206ENST00000467366 COX6B2Q6YFQ2 88 aa3.45□□□□□ -1.86
PTPRE-206ENST00000467366 DEFB105AQ8NG35 78 aa3.45□□□□□ -1.86
PTPRE-206ENST00000467366 MRPL34Q9BQ48 92 aaKnown RBP3.45□□□□□ -1.86
PTPRE-206ENST00000467366 MMP24-AS1A0A0U1RRL7 71 aa3.43□□□□□ -1.86
PTPRE-206ENST00000467366 KRTAP13-1Q8IUC0 172 aa3.43□□□□□ -1.86
PTPRE-206ENST00000467366 NEBP20929 6669 aa3.41□□□□□ -1.86
PTPRE-206ENST00000467366 KRTAP19-6Q3LI70 58 aa3.4□□□□□ -1.87
PTPRE-206ENST00000467366 Q6ZRX8 168 aa3.4□□□□□ -1.87
PTPRE-206ENST00000467366 MUC12Q9UKN1 5478 aa3.38□□□□□ -1.87
PTPRE-206ENST00000467366 MT2AP02795 61 aa3.37□□□□□ -1.87
PTPRE-206ENST00000467366 PRLHP81277 87 aa3.37□□□□□ -1.87
PTPRE-206ENST00000467366 KRTAP9-3Q9BYQ3 159 aa3.37□□□□□ -1.87
PTPRE-206ENST00000467366 SPINK1P00995 79 aa3.36□□□□□ -1.87
PTPRE-206ENST00000467366 IGFL1Q6UW32 110 aa3.36□□□□□ -1.87
PTPRE-206ENST00000467366 PLAC4Q8WY50 150 aa3.36□□□□□ -1.87
PTPRE-206ENST00000467366 R4GN34 69 aa3.36□□□□□ -1.87
PTPRE-206ENST00000467366 MT1FP04733 61 aa3.35□□□□□ -1.87
PTPRE-206ENST00000467366 C9orf92A6NGG3 77 aa3.34□□□□□ -1.87
PTPRE-206ENST00000467366 H0YAA0 97 aa3.32□□□□□ -1.88
PTPRE-206ENST00000467366 INE1O15225 51 aa3.32□□□□□ -1.88
PTPRE-206ENST00000467366 RPS29P62273 56 aaKnown RBP3.32□□□□□ -1.88
PTPRE-206ENST00000467366 SPRR1AP35321 89 aa3.31□□□□□ -1.88
PTPRE-206ENST00000467366 H1FX-AS1Q4G0G2 97 aa3.31□□□□□ -1.88
PTPRE-206ENST00000467366 KRTAP10-10P60014 251 aa3.29□□□□□ -1.88
PTPRE-206ENST00000467366 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.88
PTPRE-206ENST00000467366 RPL37P61927 97 aaKnown RBP3.28□□□□□ -1.88
PTPRE-206ENST00000467366 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.88
PTPRE-206ENST00000467366 IGKV2D-30A0A075B6S6 120 aa3.24□□□□□ -1.89
PTPRE-206ENST00000467366 IGKV2-30P06310 120 aa3.24□□□□□ -1.89
PTPRE-206ENST00000467366 SPRR1BP22528 89 aa3.24□□□□□ -1.89
PTPRE-206ENST00000467366 MDN1Q9NU22 5596 aa3.23□□□□□ -1.89
PTPRE-206ENST00000467366 KMT2DO14686 5537 aa3.21□□□□□ -1.9
PTPRE-206ENST00000467366 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
PTPRE-206ENST00000467366 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
PTPRE-206ENST00000467366 KRTAP2-1Q9BYU5 128 aa3.15□□□□□ -1.91
PTPRE-206ENST00000467366 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
PTPRE-206ENST00000467366 C10orf95Q9H7T3 257 aa3.11□□□□□ -1.91
PTPRE-206ENST00000467366 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
PTPRE-206ENST00000467366 KRTAP12-2P59991 146 aa3.09□□□□□ -1.91
PTPRE-206ENST00000467366 SPRR2EP22531 72 aa3.05□□□□□ -1.92
PTPRE-206ENST00000467366 SPRR2BP35325 72 aa3.05□□□□□ -1.92
PTPRE-206ENST00000467366 SPRR2AP35326 72 aa3.05□□□□□ -1.92
PTPRE-206ENST00000467366 KRTAP3-3Q9BYR6 98 aa3.04□□□□□ -1.92
PTPRE-206ENST00000467366 KRTAP3-2Q9BYR7 98 aa3.04□□□□□ -1.92
PTPRE-206ENST00000467366 S4R3F8 94 aa3.02□□□□□ -1.93
PTPRE-206ENST00000467366 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
PTPRE-206ENST00000467366 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
PTPRE-206ENST00000467366 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
PTPRE-206ENST00000467366 MT1BP07438 61 aa2.95□□□□□ -1.94
PTPRE-206ENST00000467366 SPRR2DP22532 72 aa2.95□□□□□ -1.94
PTPRE-206ENST00000467366 A0A0D9SG42 100 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms