RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 HIST2H2BEQ16778 126 aa2.28□□□□□ -2.04
NCL-208ENST00000466274 C4orf26Q17RF5 130 aa2.28□□□□□ -2.04
NCL-208ENST00000466274 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.28□□□□□ -2.04
NCL-208ENST00000466274 HIST1H2BHQ93079 126 aa2.28□□□□□ -2.04
NCL-208ENST00000466274 HIST1H2BNQ99877 126 aa2.28□□□□□ -2.04
NCL-208ENST00000466274 HIST1H2BMQ99879 126 aa2.28□□□□□ -2.04
NCL-208ENST00000466274 A8MUN3 132 aa2.27□□□□□ -2.05
NCL-208ENST00000466274 C8orf17Q9NRJ1 99 aa2.27□□□□□ -2.05
NCL-208ENST00000466274 CCKP06307 115 aa2.26□□□□□ -2.05
NCL-208ENST00000466274 KRTDAPP60985 99 aa2.26□□□□□ -2.05
NCL-208ENST00000466274 HIST1H4GQ99525 98 aa2.26□□□□□ -2.05
NCL-208ENST00000466274 H0YGX0 51 aa2.24□□□□□ -2.05
NCL-208ENST00000466274 KRTAP19-3Q7Z4W3 81 aa2.24□□□□□ -2.05
NCL-208ENST00000466274 CYSTM1Q9H1C7 97 aa2.24□□□□□ -2.05
NCL-208ENST00000466274 H3BQ85 93 aa2.23□□□□□ -2.05
NCL-208ENST00000466274 NDUFS5O43920 106 aa2.23□□□□□ -2.05
NCL-208ENST00000466274 NDUFA5Q16718 116 aa2.23□□□□□ -2.05
NCL-208ENST00000466274 Q5W150 140 aa2.23□□□□□ -2.05
NCL-208ENST00000466274 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
NCL-208ENST00000466274 COA6Q5JTJ3 125 aaKnown RBP2.22□□□□□ -2.05
NCL-208ENST00000466274 MRPL34Q9BQ48 92 aaKnown RBP2.22□□□□□ -2.05
NCL-208ENST00000466274 A0A1B0GX51 115 aa2.21□□□□□ -2.06
NCL-208ENST00000466274 C1orf64Q8NEQ6 169 aa2.21□□□□□ -2.06
NCL-208ENST00000466274 VPS25Q9BRG1 176 aa2.21□□□□□ -2.06
NCL-208ENST00000466274 MMP24-AS1A0A0U1RRL7 71 aa2.2□□□□□ -2.06
NCL-208ENST00000466274 PCP4L1A6NKN8 68 aa2.2□□□□□ -2.06
NCL-208ENST00000466274 TMEM254Q8TBM7 123 aa2.2□□□□□ -2.06
NCL-208ENST00000466274 hDV103S1A0JD37 113 aa2.19□□□□□ -2.06
NCL-208ENST00000466274 H0YAA0 97 aa2.19□□□□□ -2.06
NCL-208ENST00000466274 A0A0B4J2C4 111 aa2.18□□□□□ -2.06
NCL-208ENST00000466274 SEC61GP60059 68 aa2.18□□□□□ -2.06
NCL-208ENST00000466274 Q6ZQT0 140 aa2.18□□□□□ -2.06
NCL-208ENST00000466274 TMEM256-PLSCR3K7ERE1 68 aa2.17□□□□□ -2.06
NCL-208ENST00000466274 DNAL4O96015 105 aa2.17□□□□□ -2.06
NCL-208ENST00000466274 A0A087WVE0 104 aa2.16□□□□□ -2.06
NCL-208ENST00000466274 CAMK2N1Q7Z7J9 78 aa2.16□□□□□ -2.06
NCL-208ENST00000466274 ORMDL1Q9P0S3 153 aa2.16□□□□□ -2.06
NCL-208ENST00000466274 MT1GP13640 62 aa2.15□□□□□ -2.07
NCL-208ENST00000466274 FXYD2P54710 66 aa2.15□□□□□ -2.07
NCL-208ENST00000466274 R4GN34 69 aa2.15□□□□□ -2.07
NCL-208ENST00000466274 MUC5ACP98088 5654 aa2.15□□□□□ -2.07
NCL-208ENST00000466274 MT1EP04732 61 aa2.14□□□□□ -2.07
NCL-208ENST00000466274 COX8AP10176 69 aa2.14□□□□□ -2.07
NCL-208ENST00000466274 HIST1H2BLQ99880 126 aa2.14□□□□□ -2.07
NCL-208ENST00000466274 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
NCL-208ENST00000466274 K7ERJ3 54 aa2.13□□□□□ -2.07
NCL-208ENST00000466274 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
NCL-208ENST00000466274 ADM2Q7Z4H4 148 aa2.13□□□□□ -2.07
NCL-208ENST00000466274 DLEU1O43261 78 aa2.12□□□□□ -2.07
NCL-208ENST00000466274 KRTAP19-7Q3SYF9 63 aa2.12□□□□□ -2.07
NCL-208ENST00000466274 HIST3H2BBQ8N257 126 aa2.12□□□□□ -2.07
NCL-208ENST00000466274 PRO1854Q9UHT4 67 aa2.12□□□□□ -2.07
NCL-208ENST00000466274 A0A1B0GW54 56 aa2.11□□□□□ -2.07
NCL-208ENST00000466274 C9JAW5 83 aa2.11□□□□□ -2.07
NCL-208ENST00000466274 HCG22E2RYF7 251 aa2.11□□□□□ -2.07
NCL-208ENST00000466274 NDUFC1O43677 76 aa2.11□□□□□ -2.07
NCL-208ENST00000466274 C14orf144Q96I85 54 aa2.11□□□□□ -2.07
NCL-208ENST00000466274 C20orf197Q8N268 126 aa2.1□□□□□ -2.07
NCL-208ENST00000466274 HIGD1BQ9P298 99 aa2.1□□□□□ -2.07
NCL-208ENST00000466274 M0QZ58 72 aa2.09□□□□□ -2.07
NCL-208ENST00000466274 HSBP1L1C9JCN9 74 aa2.08□□□□□ -2.08
NCL-208ENST00000466274 NREPQ16612 68 aa2.08□□□□□ -2.08
NCL-208ENST00000466274 LINC01554Q52M75 96 aa2.08□□□□□ -2.08
NCL-208ENST00000466274 NAA38Q9BRA0 125 aaKnown RBP2.08□□□□□ -2.08
NCL-208ENST00000466274 LOC110117498A0A087WWA1 95 aa2.07□□□□□ -2.08
NCL-208ENST00000466274 S100A2P29034 98 aa2.07□□□□□ -2.08
NCL-208ENST00000466274 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
NCL-208ENST00000466274 S100A6P06703 90 aa2.06□□□□□ -2.08
NCL-208ENST00000466274 MT1MQ8N339 61 aa2.06□□□□□ -2.08
NCL-208ENST00000466274 BAALC-AS2P0C853 105 aa2.05□□□□□ -2.08
NCL-208ENST00000466274 COX6CP09669 75 aa2.04□□□□□ -2.08
NCL-208ENST00000466274 PSMB2P49721 201 aa2.04□□□□□ -2.08
NCL-208ENST00000466274 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
NCL-208ENST00000466274 SPATA45Q537H7 98 aa2.04□□□□□ -2.08
NCL-208ENST00000466274 CASC2Q6XLA1 102 aa2.04□□□□□ -2.08
NCL-208ENST00000466274 C14orf132Q9NPU4 83 aa2.04□□□□□ -2.08
NCL-208ENST00000466274 BPY2O14599 106 aa2.03□□□□□ -2.08
NCL-208ENST00000466274 S100A1P23297 94 aa2.02□□□□□ -2.09
NCL-208ENST00000466274 P0C880 135 aa2.01□□□□□ -2.09
NCL-208ENST00000466274 BATFQ16520 125 aa2.01□□□□□ -2.09
NCL-208ENST00000466274 JMJD7-PLA2G4BH0Y9G9 81 aa2□□□□□ -2.09
NCL-208ENST00000466274 K7EP34 96 aa1.99□□□□□ -2.09
NCL-208ENST00000466274 MT-ATP8P03928 68 aa1.99□□□□□ -2.09
NCL-208ENST00000466274 HSD52Q0P140 79 aa1.99□□□□□ -2.09
NCL-208ENST00000466274 VAMP8Q9BV40 100 aa1.99□□□□□ -2.09
NCL-208ENST00000466274 KRTAP19-5Q3LI72 72 aa1.97□□□□□ -2.09
NCL-208ENST00000466274 MT1LQ93083 61 aa1.97□□□□□ -2.09
NCL-208ENST00000466274 ACYP1P07311 99 aa1.96□□□□□ -2.1
NCL-208ENST00000466274 SCGB1C2P0DMR2 95 aa1.96□□□□□ -2.1
NCL-208ENST00000466274 CYP4F30PQ9H0H9 118 aa1.96□□□□□ -2.1
NCL-208ENST00000466274 TP53AIP1Q9HCN2 124 aa1.95□□□□□ -2.1
NCL-208ENST00000466274 A0A1W2PPM0 123 aa1.94□□□□□ -2.1
NCL-208ENST00000466274 ATXN8Q156A1 80 aa1.94□□□□□ -2.1
NCL-208ENST00000466274 PYY3Q5JQD4 70 aa1.92□□□□□ -2.1
NCL-208ENST00000466274 TRAV22A0A0B4J277 110 aa1.9□□□□□ -2.11
NCL-208ENST00000466274 A0A0D9SG42 100 aa1.9□□□□□ -2.11
NCL-208ENST00000466274 LOC101927531A0A1B0GV80 90 aa1.9□□□□□ -2.11
NCL-208ENST00000466274 UQCR10Q9UDW1 63 aa1.9□□□□□ -2.11
NCL-208ENST00000466274 M0R143 59 aa1.87□□□□□ -2.11
NCL-208ENST00000466274 TSTD3H0UI37 97 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms