RNA–Protein interactions for RNA: ENST00000463579.1

SBDS-203, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-203ENST00000463579 NBEAL1Q6ZS30 2694 aa0.15□□□□□ -2.39
SBDS-203ENST00000463579 CUBNO60494 3623 aa0.15□□□□□ -2.39
SBDS-203ENST00000463579 SPENQ96T58 3664 aaKnown RBP0.15□□□□□ -2.39
SBDS-203ENST00000463579 TRRAPQ9Y4A5 3859 aa0.14□□□□□ -2.39
SBDS-203ENST00000463579 ITPR3Q14573 2671 aa0.14□□□□□ -2.39
SBDS-203ENST00000463579 LAMA1P25391 3075 aa0.14□□□□□ -2.39
SBDS-203ENST00000463579 LAMA3Q16787 3333 aa0.13□□□□□ -2.39
SBDS-203ENST00000463579 RELNP78509 3460 aa0.13□□□□□ -2.39
SBDS-203ENST00000463579 C9orf92A6NGG3 77 aa0.13□□□□□ -2.39
SBDS-203ENST00000463579 NDUFA1O15239 70 aa0.13□□□□□ -2.39
SBDS-203ENST00000463579 SPRR2AP35326 72 aa0.13□□□□□ -2.39
SBDS-203ENST00000463579 DEFB131AP59861 70 aa0.13□□□□□ -2.39
SBDS-203ENST00000463579 SMIM2Q9BVW6 85 aa0.13□□□□□ -2.39
SBDS-203ENST00000463579 CFAP54Q96N23 3096 aa0.13□□□□□ -2.39
SBDS-203ENST00000463579 MGAQ8IWI9 3026 aa0.13□□□□□ -2.39
SBDS-203ENST00000463579 C5orf42Q9H799 3197 aa0.12□□□□□ -2.39
SBDS-203ENST00000463579 ATMQ13315 3056 aa0.12□□□□□ -2.39
SBDS-203ENST00000463579 MGAM2Q2M2H8 2515 aa0.12□□□□□ -2.39
SBDS-203ENST00000463579 CEP250Q9BV73 2442 aa0.12□□□□□ -2.39
SBDS-203ENST00000463579 TRIOO75962 3097 aa0.12□□□□□ -2.39
SBDS-203ENST00000463579 ADGRG4Q8IZF6 3080 aa0.12□□□□□ -2.39
SBDS-203ENST00000463579 MMP24-AS1A0A0U1RRL7 71 aa0.12□□□□□ -2.39
SBDS-203ENST00000463579 DEFB106AQ8N104 65 aa0.12□□□□□ -2.39
SBDS-203ENST00000463579 NOP10Q9NPE3 64 aaKnown RBP0.12□□□□□ -2.39
SBDS-203ENST00000463579 TIMM8BQ9Y5J9 83 aaPredicted RBP0.12□□□□□ -2.39
SBDS-203ENST00000463579 DNAH10Q8IVF4 4471 aa0.12□□□□□ -2.39
SBDS-203ENST00000463579 TEX15Q9BXT5 2789 aa0.11□□□□□ -2.39
SBDS-203ENST00000463579 FRYLO94915 3013 aa0.11□□□□□ -2.39
SBDS-203ENST00000463579 SPTAN1Q13813 2472 aaKnown RBP0.11□□□□□ -2.39
SBDS-203ENST00000463579 SVEP1Q4LDE5 3571 aa0.11□□□□□ -2.39
SBDS-203ENST00000463579 A8MTW9 85 aa0.11□□□□□ -2.39
SBDS-203ENST00000463579 MT1AP04731 61 aa0.11□□□□□ -2.39
SBDS-203ENST00000463579 FAT1Q14517 4588 aa0.11□□□□□ -2.39
SBDS-203ENST00000463579 DNAH17Q9UFH2 4485 aa0.11□□□□□ -2.39
SBDS-203ENST00000463579 LRBAP50851 2863 aa0.1□□□□□ -2.39
SBDS-203ENST00000463579 H0YGG7 62 aa0.1□□□□□ -2.39
SBDS-203ENST00000463579 PLECQ15149 4684 aaKnown RBP0.1□□□□□ -2.39
SBDS-203ENST00000463579 SSPOA2VEC9 5147 aa0.1□□□□□ -2.39
SBDS-203ENST00000463579 SPRR2EP22531 72 aa0.09□□□□□ -2.4
SBDS-203ENST00000463579 TFF3Q07654 80 aa0.09□□□□□ -2.4
SBDS-203ENST00000463579 CSMD1Q96PZ7 3565 aa0.09□□□□□ -2.4
SBDS-203ENST00000463579 PRUNE2Q8WUY3 3088 aa0.09□□□□□ -2.4
SBDS-203ENST00000463579 ZFHX4Q86UP3 3567 aa0.09□□□□□ -2.4
SBDS-203ENST00000463579 HERC1Q15751 4861 aa0.08□□□□□ -2.4
SBDS-203ENST00000463579 M0QY20 66 aa0.08□□□□□ -2.4
SBDS-203ENST00000463579 M0QZ58 72 aa0.08□□□□□ -2.4
SBDS-203ENST00000463579 KRTAP6-2Q3LI66 62 aa0.08□□□□□ -2.4
SBDS-203ENST00000463579 KAAG1Q9UBP8 84 aa0.08□□□□□ -2.4
SBDS-203ENST00000463579 DYNC1H1Q14204 4646 aaKnown RBP0.08□□□□□ -2.4
SBDS-203ENST00000463579 MUC2Q02817 5179 aa0.08□□□□□ -2.4
SBDS-203ENST00000463579 DOPEY1Q5JWR5 2465 aa0.08□□□□□ -2.4
SBDS-203ENST00000463579 RYR1P21817 5038 aa0.07□□□□□ -2.4
SBDS-203ENST00000463579 MUC3AQ02505 3323 aa0.07□□□□□ -2.4
SBDS-203ENST00000463579 KMT2CQ8NEZ4 4911 aaKnown RBP0.07□□□□□ -2.4
SBDS-203ENST00000463579 MUC17Q685J3 4493 aa0.07□□□□□ -2.4
SBDS-203ENST00000463579 PCLOQ9Y6V0 5065 aa0.07□□□□□ -2.4
SBDS-203ENST00000463579 SNRPGP62308 76 aaKnown RBP0.07□□□□□ -2.4
SBDS-203ENST00000463579 KRTAP19-5Q3LI72 72 aa0.07□□□□□ -2.4
SBDS-203ENST00000463579 WFDC10BQ8IUB3 73 aa0.07□□□□□ -2.4
SBDS-203ENST00000463579 KRTAP8-1Q8IUC2 63 aa0.07□□□□□ -2.4
SBDS-203ENST00000463579 SPRR2FQ96RM1 72 aa0.07□□□□□ -2.4
SBDS-203ENST00000463579 UBR4Q5T4S7 5183 aa0.07□□□□□ -2.4
SBDS-203ENST00000463579 DNAH5Q8TE73 4624 aa0.07□□□□□ -2.4
SBDS-203ENST00000463579 MYO9AB2RTY4 2548 aa0.07□□□□□ -2.4
SBDS-203ENST00000463579 NIPBLQ6KC79 2804 aaeCLIP0.06□□□□□ -2.4
SBDS-203ENST00000463579 LAMA2P24043 3122 aaKnown RBP0.06□□□□□ -2.4
SBDS-203ENST00000463579 TNP1P09430 55 aa0.06□□□□□ -2.4
SBDS-203ENST00000463579 CLPSL2Q6UWE3 100 aa0.06□□□□□ -2.4
SBDS-203ENST00000463579 MUC12Q9UKN1 5478 aa0.06□□□□□ -2.4
SBDS-203ENST00000463579 DNAH12Q6ZR08 3092 aa0.06□□□□□ -2.4
SBDS-203ENST00000463579 CFAP46Q8IYW2 2715 aa0.06□□□□□ -2.4
SBDS-203ENST00000463579 ITPR2Q14571 2701 aa0.05□□□□□ -2.4
SBDS-203ENST00000463579 POLR2KP53803 58 aaKnown RBP0.05□□□□□ -2.4
SBDS-203ENST00000463579 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
SBDS-203ENST00000463579 STARD9Q9P2P6 4700 aa0.05□□□□□ -2.4
SBDS-203ENST00000463579 SRCAPQ6ZRS2 3230 aa0.05□□□□□ -2.4
SBDS-203ENST00000463579 SMG1Q96Q15 3661 aaKnown RBP0.05□□□□□ -2.4
SBDS-203ENST00000463579 DNHD1Q96M86 4753 aa0.04□□□□□ -2.4
SBDS-203ENST00000463579 H3BNG1 76 aa0.04□□□□□ -2.4
SBDS-203ENST00000463579 USH2AO75445 5202 aa0.03□□□□□ -2.4
SBDS-203ENST00000463579 EYSQ5T1H1 3165 aa0.03□□□□□ -2.4
SBDS-203ENST00000463579 WDFY4Q6ZS81 3184 aa0.03□□□□□ -2.4
SBDS-203ENST00000463579 VPS13CQ709C8 3753 aa0.03□□□□□ -2.4
SBDS-203ENST00000463579 TLN1Q9Y490 2541 aaKnown RBP0.03□□□□□ -2.4
SBDS-203ENST00000463579 EPPK1P58107 5090 aaKnown RBP0.03□□□□□ -2.41
SBDS-203ENST00000463579 DSTQ03001 7570 aaKnown RBP0.03□□□□□ -2.41
SBDS-203ENST00000463579 BOD1L1Q8NFC6 3051 aa0.02□□□□□ -2.41
SBDS-203ENST00000463579 FREM2Q5SZK8 3169 aa0.02□□□□□ -2.41
SBDS-203ENST00000463579 MKI67P46013 3256 aaKnown RBP0.02□□□□□ -2.41
SBDS-203ENST00000463579 CSMD2Q7Z408 3487 aa0.02□□□□□ -2.41
SBDS-203ENST00000463579 RNF213Q63HN8 5207 aa0.02□□□□□ -2.41
SBDS-203ENST00000463579 CEP295Q9C0D2 2601 aa0.02□□□□□ -2.41
SBDS-203ENST00000463579 SMR3BP02814 79 aaPredicted RBP0.01□□□□□ -2.41
SBDS-203ENST00000463579 DMDP11532 3685 aa0□□□□□ -2.41
SBDS-203ENST00000463579 RPL39P62891 51 aaKnown RBP0□□□□□ -2.41
SBDS-203ENST00000463579 DEFB110Q30KQ9 67 aa0□□□□□ -2.41
SBDS-203ENST00000463579 PCNTO95613 3336 aa-0.01□□□□□ -2.41
SBDS-203ENST00000463579 CEP350Q5VT06 3117 aa-0.01□□□□□ -2.41
SBDS-203ENST00000463579 MT1HP80294 61 aa-0.01□□□□□ -2.41
SBDS-203ENST00000463579 XIRP2A4UGR9 3374 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms