RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 NXT2Q9NPJ8 142 aaKnown RBP-1.21□□□□□ -2.6
CALD1-213ENST00000462181 SAR1AQ9NR31 198 aa-1.21□□□□□ -2.6
CALD1-213ENST00000462181 MUSTN1Q8IVN3 82 aa-1.22□□□□□ -2.6
CALD1-213ENST00000462181 CMC2Q9NRP2 79 aa-1.22□□□□□ -2.6
CALD1-213ENST00000462181 I3L3M4 83 aa-1.23□□□□□ -2.61
CALD1-213ENST00000462181 PPP1R17O96001 155 aa-1.23□□□□□ -2.61
CALD1-213ENST00000462181 CEBPZOSA8MTT3 80 aa-1.24□□□□□ -2.61
CALD1-213ENST00000462181 SMIM6P0DI80 62 aa-1.24□□□□□ -2.61
CALD1-213ENST00000462181 PPP3R1P63098 170 aa-1.24□□□□□ -2.61
CALD1-213ENST00000462181 MRPS10P82664 201 aaKnown RBP-1.24□□□□□ -2.61
CALD1-213ENST00000462181 C10orf113Q5VZT2 155 aa-1.24□□□□□ -2.61
CALD1-213ENST00000462181 RPL13AP3Q6NVV1 102 aa-1.24□□□□□ -2.61
CALD1-213ENST00000462181 TRAV13-2A0A0B4J235 113 aa-1.25□□□□□ -2.61
CALD1-213ENST00000462181 HIST1H1DP16402 221 aaKnown RBP-1.25□□□□□ -2.61
CALD1-213ENST00000462181 M0R129 80 aa-1.26□□□□□ -2.61
CALD1-213ENST00000462181 COX17Q14061 63 aa-1.26□□□□□ -2.61
CALD1-213ENST00000462181 CTAGE3PQ8IX95 158 aa-1.26□□□□□ -2.61
CALD1-213ENST00000462181 RPL39LQ96EH5 51 aaKnown RBP-1.26□□□□□ -2.61
CALD1-213ENST00000462181 SPCS1Q9Y6A9 102 aa-1.26□□□□□ -2.61
CALD1-213ENST00000462181 A0A0G2JND7 137 aa-1.27□□□□□ -2.61
CALD1-213ENST00000462181 GNG8Q9UK08 70 aa-1.27□□□□□ -2.61
CALD1-213ENST00000462181 BAGE3Q86Y29 109 aa-1.28□□□□□ -2.61
CALD1-213ENST00000462181 UBE2G1P62253 170 aa-1.29□□□□□ -2.62
CALD1-213ENST00000462181 TMEM191AQ9H0A3 160 aa-1.29□□□□□ -2.62
CALD1-213ENST00000462181 S100PP25815 95 aa-1.3□□□□□ -2.62
CALD1-213ENST00000462181 S100A7L2Q5SY68 101 aa-1.3□□□□□ -2.62
CALD1-213ENST00000462181 PAIP2BQ9ULR5 123 aaKnown RBP-1.3□□□□□ -2.62
CALD1-213ENST00000462181 A0A087WXM4 84 aa-1.31□□□□□ -2.62
CALD1-213ENST00000462181 H3BUT2 72 aa-1.31□□□□□ -2.62
CALD1-213ENST00000462181 LINC00158P58513 81 aa-1.31□□□□□ -2.62
CALD1-213ENST00000462181 CDKN2A-AS1Q9UH64 79 aa-1.31□□□□□ -2.62
CALD1-213ENST00000462181 AP4S1Q9Y587 144 aa-1.31□□□□□ -2.62
CALD1-213ENST00000462181 TRBV7-4A0A0J9YYF1 115 aa-1.32□□□□□ -2.62
CALD1-213ENST00000462181 COX7BP24311 80 aa-1.32□□□□□ -2.62
CALD1-213ENST00000462181 SELENOWP63302 87 aa-1.32□□□□□ -2.62
CALD1-213ENST00000462181 MRPL34Q9BQ48 92 aaKnown RBP-1.32□□□□□ -2.62
CALD1-213ENST00000462181 UBE2L5PA0A1B0GUS4 154 aa-1.33□□□□□ -2.62
CALD1-213ENST00000462181 FCER1GP30273 86 aa-1.33□□□□□ -2.62
CALD1-213ENST00000462181 RPS25P62851 125 aaKnown RBP-1.33□□□□□ -2.62
CALD1-213ENST00000462181 RPL39P62891 51 aaKnown RBP-1.33□□□□□ -2.62
CALD1-213ENST00000462181 SPTSSBQ8NFR3 76 aa-1.34□□□□□ -2.62
CALD1-213ENST00000462181 PFDN5Q99471 154 aa-1.34□□□□□ -2.62
CALD1-213ENST00000462181 FAM167A-AS1Q96KT0 104 aa-1.36□□□□□ -2.63
CALD1-213ENST00000462181 ST20Q9HBF5 79 aa-1.36□□□□□ -2.63
CALD1-213ENST00000462181 KCNRGQ8N5I3 272 aa-1.37□□□□□ -2.63
CALD1-213ENST00000462181 C2orf88Q9BSF0 95 aa-1.38□□□□□ -2.63
CALD1-213ENST00000462181 CACFD1Q9UGQ2 172 aa-1.38□□□□□ -2.63
CALD1-213ENST00000462181 J3QR89 54 aa-1.39□□□□□ -2.63
CALD1-213ENST00000462181 NDUFB1O75438 58 aa-1.39□□□□□ -2.63
CALD1-213ENST00000462181 HMGN1P05114 100 aa-1.39□□□□□ -2.63
CALD1-213ENST00000462181 ACYP1P07311 99 aa-1.39□□□□□ -2.63
CALD1-213ENST00000462181 SMIM11AP58511 58 aa-1.39□□□□□ -2.63
CALD1-213ENST00000462181 RRAS2P62070 204 aaPredicted RBP-1.39□□□□□ -2.63
CALD1-213ENST00000462181 CCDC58Q4VC31 144 aa-1.39□□□□□ -2.63
CALD1-213ENST00000462181 C9orf62Q8N4C0 152 aa-1.39□□□□□ -2.63
CALD1-213ENST00000462181 MGST2Q99735 147 aa-1.39□□□□□ -2.63
CALD1-213ENST00000462181 FXYD6Q9H0Q3 95 aa-1.39□□□□□ -2.63
CALD1-213ENST00000462181 SCGB1A1P11684 91 aa-1.4□□□□□ -2.63
CALD1-213ENST00000462181 IFI27P40305 119 aaPredicted RBP-1.4□□□□□ -2.63
CALD1-213ENST00000462181 UBE2L3P68036 154 aaKnown RBP-1.4□□□□□ -2.63
CALD1-213ENST00000462181 SMIM3Q9BZL3 60 aa-1.4□□□□□ -2.63
CALD1-213ENST00000462181 SNCGO76070 127 aa-1.41□□□□□ -2.64
CALD1-213ENST00000462181 SEC11AP67812 179 aa-1.41□□□□□ -2.64
CALD1-213ENST00000462181 hADV29S1A0JD25 119 aa-1.42□□□□□ -2.64
CALD1-213ENST00000462181 H7BZZ5 65 aa-1.42□□□□□ -2.64
CALD1-213ENST00000462181 SMIM13P0DJ93 91 aa-1.42□□□□□ -2.64
CALD1-213ENST00000462181 GSKIPQ9P0R6 139 aa-1.43□□□□□ -2.64
CALD1-213ENST00000462181 CTXND1A0A1B0GTU2 59 aa-1.44□□□□□ -2.64
CALD1-213ENST00000462181 SMIM4Q8WVI0 70 aa-1.44□□□□□ -2.64
CALD1-213ENST00000462181 NDUFB6O95139 128 aa-1.45□□□□□ -2.64
CALD1-213ENST00000462181 SNHG12Q9BXW3 62 aa-1.45□□□□□ -2.64
CALD1-213ENST00000462181 GNG2P59768 71 aa-1.46□□□□□ -2.64
CALD1-213ENST00000462181 SMCO1Q147U7 214 aa-1.46□□□□□ -2.64
CALD1-213ENST00000462181 WHAMMP3Q1A5X7 153 aa-1.46□□□□□ -2.64
CALD1-213ENST00000462181 SEC11CQ9BY50 192 aa-1.46□□□□□ -2.64
CALD1-213ENST00000462181 SFTA2Q6UW10 78 aa-1.47□□□□□ -2.64
CALD1-213ENST00000462181 K7ERU9 68 aa-1.48□□□□□ -2.65
CALD1-213ENST00000462181 MEIG1Q5JSS6 88 aa-1.48□□□□□ -2.65
CALD1-213ENST00000462181 CCDC167Q9P0B6 97 aa-1.49□□□□□ -2.65
CALD1-213ENST00000462181 S100A8P05109 93 aa-1.5□□□□□ -2.65
CALD1-213ENST00000462181 TMEM170BQ5T4T1 132 aa-1.5□□□□□ -2.65
CALD1-213ENST00000462181 ACBD7Q8N6N7 88 aa-1.51□□□□□ -2.65
CALD1-213ENST00000462181 ANP32BQ92688 251 aaKnown RBP-1.52□□□□□ -2.65
CALD1-213ENST00000462181 SFT2D2O95562 160 aa-1.53□□□□□ -2.65
CALD1-213ENST00000462181 PSENENQ9NZ42 101 aa-1.53□□□□□ -2.65
CALD1-213ENST00000462181 V9GYH0 126 aa-1.53□□□□□ -2.65
CALD1-213ENST00000462181 LINC00587B1AMM8 73 aa-1.56□□□□□ -2.66
CALD1-213ENST00000462181 SPANXDQ9BXN6 97 aa-1.56□□□□□ -2.66
CALD1-213ENST00000462181 HIGD1BQ9P298 99 aa-1.56□□□□□ -2.66
CALD1-213ENST00000462181 IGIPA6NJ69 53 aa-1.58□□□□□ -2.66
CALD1-213ENST00000462181 C12orf73Q69YU5 71 aa-1.58□□□□□ -2.66
CALD1-213ENST00000462181 BAGE2Q86Y30 109 aa-1.58□□□□□ -2.66
CALD1-213ENST00000462181 ARPC5O15511 151 aa-1.59□□□□□ -2.66
CALD1-213ENST00000462181 C20orf78Q9BR46 151 aa-1.59□□□□□ -2.66
CALD1-213ENST00000462181 UQCR11O14957 56 aa-1.6□□□□□ -2.67
CALD1-213ENST00000462181 MRPL54Q6P161 138 aaKnown RBP-1.6□□□□□ -2.67
CALD1-213ENST00000462181 SMIM27A0A1W2PRY6 76 aa-1.61□□□□□ -2.67
CALD1-213ENST00000462181 DR1Q01658 176 aa-1.62□□□□□ -2.67
CALD1-213ENST00000462181 PIGBOS1A0A0B4J2F0 54 aa-1.63□□□□□ -2.67
CALD1-213ENST00000462181 BVES-AS1Q5T3Y7 98 aa-1.63□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms