RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 WNK2Q9Y3S1 2297 aa1.89□□□□□ -2.11
ATRX-204ENST00000460639 TENM1Q9UKZ4 2725 aa1.88□□□□□ -2.11
ATRX-204ENST00000460639 ATMQ13315 3056 aa1.87□□□□□ -2.11
ATRX-204ENST00000460639 COL6A6A6NMZ7 2263 aa1.87□□□□□ -2.11
ATRX-204ENST00000460639 SPINK1P00995 79 aa1.87□□□□□ -2.11
ATRX-204ENST00000460639 LAMA1P25391 3075 aa1.87□□□□□ -2.11
ATRX-204ENST00000460639 HERC1Q15751 4861 aa1.86□□□□□ -2.11
ATRX-204ENST00000460639 BSNQ9UPA5 3926 aa1.86□□□□□ -2.11
ATRX-204ENST00000460639 CUBNO60494 3623 aa1.86□□□□□ -2.11
ATRX-204ENST00000460639 MEGF8Q7Z7M0 2845 aa1.86□□□□□ -2.11
ATRX-204ENST00000460639 NOP10Q9NPE3 64 aaKnown RBP1.86□□□□□ -2.11
ATRX-204ENST00000460639 APLNQ9ULZ1 77 aa1.86□□□□□ -2.11
ATRX-204ENST00000460639 SPTBN1Q01082 2364 aaKnown RBP1.86□□□□□ -2.11
ATRX-204ENST00000460639 ABCA13Q86UQ4 5058 aa1.85□□□□□ -2.11
ATRX-204ENST00000460639 S4R3F8 94 aa1.85□□□□□ -2.11
ATRX-204ENST00000460639 PRRC2CQ9Y520 2896 aaKnown RBP1.84□□□□□ -2.11
ATRX-204ENST00000460639 CSPG4Q6UVK1 2322 aa1.84□□□□□ -2.11
ATRX-204ENST00000460639 ANK2Q01484 3957 aa1.84□□□□□ -2.11
ATRX-204ENST00000460639 VPS13CQ709C8 3753 aa1.84□□□□□ -2.11
ATRX-204ENST00000460639 KRTAP13-1Q8IUC0 172 aa1.84□□□□□ -2.11
ATRX-204ENST00000460639 DCHS2Q6V1P9 2916 aa1.84□□□□□ -2.11
ATRX-204ENST00000460639 PRO0255Q9UI72 69 aa1.83□□□□□ -2.12
ATRX-204ENST00000460639 MGAM2Q2M2H8 2515 aa1.82□□□□□ -2.12
ATRX-204ENST00000460639 NBASA2RRP1 2371 aa1.82□□□□□ -2.12
ATRX-204ENST00000460639 APCP25054 2843 aa1.82□□□□□ -2.12
ATRX-204ENST00000460639 APC2O95996 2303 aa1.81□□□□□ -2.12
ATRX-204ENST00000460639 ZANQ9Y493 2812 aa1.81□□□□□ -2.12
ATRX-204ENST00000460639 NSD1Q96L73 2696 aaPredicted RBP1.8□□□□□ -2.12
ATRX-204ENST00000460639 Q5VSD8 79 aa1.8□□□□□ -2.12
ATRX-204ENST00000460639 ACACAQ13085 2346 aa1.79□□□□□ -2.12
ATRX-204ENST00000460639 DEFB136Q30KP8 78 aa1.79□□□□□ -2.12
ATRX-204ENST00000460639 AKAP6Q13023 2319 aa1.78□□□□□ -2.12
ATRX-204ENST00000460639 KRTAP12-4P60329 112 aa1.78□□□□□ -2.12
ATRX-204ENST00000460639 DEFB124Q8NES8 71 aa1.78□□□□□ -2.12
ATRX-204ENST00000460639 ACANP16112 2415 aa1.78□□□□□ -2.12
ATRX-204ENST00000460639 A0A0D9SG42 100 aa1.77□□□□□ -2.13
ATRX-204ENST00000460639 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
ATRX-204ENST00000460639 DEFB133Q30KQ1 61 aa1.77□□□□□ -2.13
ATRX-204ENST00000460639 TENM2Q9NT68 2774 aa1.77□□□□□ -2.13
ATRX-204ENST00000460639 TENM3Q9P273 2699 aa1.76□□□□□ -2.13
ATRX-204ENST00000460639 PRKDCP78527 4128 aaKnown RBP1.76□□□□□ -2.13
ATRX-204ENST00000460639 MXRA5Q9NR99 2828 aa1.75□□□□□ -2.13
ATRX-204ENST00000460639 FAT4Q6V0I7 4981 aa1.74□□□□□ -2.13
ATRX-204ENST00000460639 SACSQ9NZJ4 4579 aa1.74□□□□□ -2.13
ATRX-204ENST00000460639 PKDREJQ9NTG1 2253 aa1.74□□□□□ -2.13
ATRX-204ENST00000460639 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
ATRX-204ENST00000460639 RNF213Q63HN8 5207 aa1.73□□□□□ -2.13
ATRX-204ENST00000460639 FSIP2Q5CZC0 6907 aa1.72□□□□□ -2.13
ATRX-204ENST00000460639 TACC2O95359 2948 aa1.71□□□□□ -2.14
ATRX-204ENST00000460639 DYNC2H1Q8NCM8 4307 aaKnown RBP1.71□□□□□ -2.14
ATRX-204ENST00000460639 ZNF469Q96JG9 3925 aaPredicted RBP1.71□□□□□ -2.14
ATRX-204ENST00000460639 A0A096LNI7 61 aa1.71□□□□□ -2.14
ATRX-204ENST00000460639 A0A096LPF7 62 aa1.71□□□□□ -2.14
ATRX-204ENST00000460639 SPINK6Q6UWN8 80 aa1.71□□□□□ -2.14
ATRX-204ENST00000460639 SVEP1Q4LDE5 3571 aa1.71□□□□□ -2.14
ATRX-204ENST00000460639 MAP1AP78559 2803 aaPredicted RBP1.7□□□□□ -2.14
ATRX-204ENST00000460639 M0QZ58 72 aa1.7□□□□□ -2.14
ATRX-204ENST00000460639 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
ATRX-204ENST00000460639 TRRAPQ9Y4A5 3859 aa1.69□□□□□ -2.14
ATRX-204ENST00000460639 ROS1P08922 2347 aa1.68□□□□□ -2.14
ATRX-204ENST00000460639 DNAH1Q9P2D7 4330 aa1.68□□□□□ -2.14
ATRX-204ENST00000460639 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
ATRX-204ENST00000460639 H3BNG1 76 aa1.68□□□□□ -2.14
ATRX-204ENST00000460639 LINC01556Q5JQF7 62 aa1.68□□□□□ -2.14
ATRX-204ENST00000460639 SMR3AQ99954 134 aa1.68□□□□□ -2.14
ATRX-204ENST00000460639 SONP18583 2426 aaKnown RBP1.68□□□□□ -2.14
ATRX-204ENST00000460639 HECTD4Q9Y4D8 3996 aa1.66□□□□□ -2.14
ATRX-204ENST00000460639 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.15
ATRX-204ENST00000460639 ANK3Q12955 4377 aaKnown RBP1.63□□□□□ -2.15
ATRX-204ENST00000460639 SPART-AS1P0CW21 52 aa1.63□□□□□ -2.15
ATRX-204ENST00000460639 HMCN2Q8NDA2 5059 aa1.63□□□□□ -2.15
ATRX-204ENST00000460639 U3KQA8 63 aa1.62□□□□□ -2.15
ATRX-204ENST00000460639 COL7A1Q02388 2944 aa1.62□□□□□ -2.15
ATRX-204ENST00000460639 CMYA5Q8N3K9 4069 aa1.61□□□□□ -2.15
ATRX-204ENST00000460639 NEBP20929 6669 aa1.61□□□□□ -2.15
ATRX-204ENST00000460639 KRTAP10-4P60372 401 aaPredicted RBP1.59□□□□□ -2.15
ATRX-204ENST00000460639 CRCT1Q9UGL9 99 aa1.59□□□□□ -2.15
ATRX-204ENST00000460639 SYNE2Q8WXH0 6885 aaKnown RBP1.58□□□□□ -2.16
ATRX-204ENST00000460639 HTN3P15516 51 aa1.58□□□□□ -2.16
ATRX-204ENST00000460639 STAB2Q8WWQ8 2551 aa1.57□□□□□ -2.16
ATRX-204ENST00000460639 FRAS1Q86XX4 4008 aa1.56□□□□□ -2.16
ATRX-204ENST00000460639 LYSTQ99698 3801 aa1.56□□□□□ -2.16
ATRX-204ENST00000460639 KMT2AQ03164 3969 aa1.55□□□□□ -2.16
ATRX-204ENST00000460639 PLECQ15149 4684 aaKnown RBP1.54□□□□□ -2.16
ATRX-204ENST00000460639 TNP1P09430 55 aa1.54□□□□□ -2.16
ATRX-204ENST00000460639 MYCBP2O75592 4640 aa1.53□□□□□ -2.16
ATRX-204ENST00000460639 DMBT1Q9UGM3 2413 aaPredicted RBP1.52□□□□□ -2.17
ATRX-204ENST00000460639 SSPOA2VEC9 5147 aa1.52□□□□□ -2.17
ATRX-204ENST00000460639 CSMD3Q7Z407 3707 aa1.52□□□□□ -2.17
ATRX-204ENST00000460639 DYNC1H1Q14204 4646 aaKnown RBP1.51□□□□□ -2.17
ATRX-204ENST00000460639 RPS29P62273 56 aaKnown RBP1.51□□□□□ -2.17
ATRX-204ENST00000460639 DEFB135Q30KP9 77 aa1.51□□□□□ -2.17
ATRX-204ENST00000460639 DNAH10Q8IVF4 4471 aa1.51□□□□□ -2.17
ATRX-204ENST00000460639 SRRM2Q9UQ35 2752 aaKnown RBP1.51□□□□□ -2.17
ATRX-204ENST00000460639 PKHD1P08F94 4074 aa1.5□□□□□ -2.17
ATRX-204ENST00000460639 DNAH9Q9NYC9 4486 aa1.5□□□□□ -2.17
ATRX-204ENST00000460639 DEFB4AO15263 64 aa1.48□□□□□ -2.17
ATRX-204ENST00000460639 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
ATRX-204ENST00000460639 HSPG2P98160 4391 aa1.46□□□□□ -2.18
ATRX-204ENST00000460639 C9orf92A6NGG3 77 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms