RNA–Protein interactions for RNA: ENST00000458659.2

TSC22D1-203, Transcript of TSC22 domain family member 1, humanhuman

TSL 1 (best) BASIC

Gene TSC22D1, Length 4,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-203ENST00000458659 DNAH17Q9UFH2 4485 aa6.34□□□□□ -1.39
TSC22D1-203ENST00000458659 DNAH7Q8WXX0 4024 aa6.33□□□□□ -1.4
TSC22D1-203ENST00000458659 LRP1BQ9NZR2 4599 aa6.32□□□□□ -1.4
TSC22D1-203ENST00000458659 CMYA5Q8N3K9 4069 aa6.32□□□□□ -1.4
TSC22D1-203ENST00000458659 TNP1P09430 55 aa6.3□□□□□ -1.4
TSC22D1-203ENST00000458659 A0A1B0GVY2 172 aa6.27□□□□□ -1.41
TSC22D1-203ENST00000458659 VPS13DQ5THJ4 4388 aa6.25□□□□□ -1.41
TSC22D1-203ENST00000458659 DNAH2Q9P225 4427 aa6.25□□□□□ -1.41
TSC22D1-203ENST00000458659 DNAH5Q8TE73 4624 aa6.25□□□□□ -1.41
TSC22D1-203ENST00000458659 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
TSC22D1-203ENST00000458659 FAT1Q14517 4588 aa6.21□□□□□ -1.41
TSC22D1-203ENST00000458659 DNAH3Q8TD57 4116 aa6.2□□□□□ -1.42
TSC22D1-203ENST00000458659 DNAH6Q9C0G6 4158 aa6.19□□□□□ -1.42
TSC22D1-203ENST00000458659 PRKDCP78527 4128 aaKnown RBP6.18□□□□□ -1.42
TSC22D1-203ENST00000458659 HECTD4Q9Y4D8 3996 aa6.14□□□□□ -1.43
TSC22D1-203ENST00000458659 VPS13BQ7Z7G8 4022 aa6.13□□□□□ -1.43
TSC22D1-203ENST00000458659 MYCBP2O75592 4640 aa6.12□□□□□ -1.43
TSC22D1-203ENST00000458659 KRTAP10-4P60372 401 aaPredicted RBP6.09□□□□□ -1.43
TSC22D1-203ENST00000458659 DNHD1Q96M86 4753 aa6.09□□□□□ -1.44
TSC22D1-203ENST00000458659 DYNC1H1Q14204 4646 aaKnown RBP5.99□□□□□ -1.45
TSC22D1-203ENST00000458659 LORP23490 312 aaPredicted RBP5.98□□□□□ -1.45
TSC22D1-203ENST00000458659 DYNC2H1Q8NCM8 4307 aaKnown RBP5.97□□□□□ -1.45
TSC22D1-203ENST00000458659 APOBP04114 4563 aaKnown RBP5.93□□□□□ -1.46
TSC22D1-203ENST00000458659 SACSQ9NZJ4 4579 aa5.92□□□□□ -1.46
TSC22D1-203ENST00000458659 KRTAP10-10P60014 251 aa5.92□□□□□ -1.46
TSC22D1-203ENST00000458659 MT1HL1P0DM35 61 aa5.91□□□□□ -1.46
TSC22D1-203ENST00000458659 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
TSC22D1-203ENST00000458659 HYDINQ4G0P3 5121 aa5.87□□□□□ -1.47
TSC22D1-203ENST00000458659 LRP1Q07954 4544 aaKnown RBP5.87□□□□□ -1.47
TSC22D1-203ENST00000458659 FAT3Q8TDW7 4589 aa5.83□□□□□ -1.48
TSC22D1-203ENST00000458659 PKHD1P08F94 4074 aa5.82□□□□□ -1.48
TSC22D1-203ENST00000458659 FAT2Q9NYQ8 4349 aa5.74□□□□□ -1.49
TSC22D1-203ENST00000458659 RYR1P21817 5038 aa5.72□□□□□ -1.49
TSC22D1-203ENST00000458659 KRTAP4-5Q9BYR2 181 aa5.72□□□□□ -1.49
TSC22D1-203ENST00000458659 LRP2P98164 4655 aa5.64□□□□□ -1.51
TSC22D1-203ENST00000458659 KIAA1109Q2LD37 5005 aa5.63□□□□□ -1.51
TSC22D1-203ENST00000458659 KRTAP4-1Q9BYQ7 146 aa5.59□□□□□ -1.51
TSC22D1-203ENST00000458659 HSPG2P98160 4391 aa5.59□□□□□ -1.52
TSC22D1-203ENST00000458659 PKD1P98161 4303 aa5.58□□□□□ -1.52
TSC22D1-203ENST00000458659 KMT2CQ8NEZ4 4911 aaKnown RBP5.53□□□□□ -1.52
TSC22D1-203ENST00000458659 LCE3AQ5TA76 89 aa5.53□□□□□ -1.52
TSC22D1-203ENST00000458659 KRTAP17-1Q9BYP8 105 aa5.51□□□□□ -1.53
TSC22D1-203ENST00000458659 RYR3Q15413 4870 aa5.49□□□□□ -1.53
TSC22D1-203ENST00000458659 LPAP08519 4548 aa5.46□□□□□ -1.54
TSC22D1-203ENST00000458659 PKHD1L1Q86WI1 4243 aa5.37□□□□□ -1.55
TSC22D1-203ENST00000458659 INE1O15225 51 aa5.35□□□□□ -1.55
TSC22D1-203ENST00000458659 RYR2Q92736 4967 aa5.34□□□□□ -1.55
TSC22D1-203ENST00000458659 KRTAP12-3P60328 96 aa5.34□□□□□ -1.56
TSC22D1-203ENST00000458659 KRTAP10-12P60413 245 aa5.34□□□□□ -1.56
TSC22D1-203ENST00000458659 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
TSC22D1-203ENST00000458659 TNXBP22105 4242 aa5.28□□□□□ -1.56
TSC22D1-203ENST00000458659 EPPK1P58107 5090 aaKnown RBP5.15□□□□□ -1.59
TSC22D1-203ENST00000458659 ABCA13Q86UQ4 5058 aa5.11□□□□□ -1.59
TSC22D1-203ENST00000458659 MUC2Q02817 5179 aa5.1□□□□□ -1.59
TSC22D1-203ENST00000458659 BIRC6Q9NR09 4857 aa5.1□□□□□ -1.59
TSC22D1-203ENST00000458659 SPRR2GQ9BYE4 73 aa5.09□□□□□ -1.59
TSC22D1-203ENST00000458659 HERC2O95714 4834 aa5.07□□□□□ -1.6
TSC22D1-203ENST00000458659 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
TSC22D1-203ENST00000458659 MT1FP04733 61 aa5.06□□□□□ -1.6
TSC22D1-203ENST00000458659 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
TSC22D1-203ENST00000458659 MT2AP02795 61 aa5.04□□□□□ -1.6
TSC22D1-203ENST00000458659 KRTAP19-1Q8IUB9 90 aa5.04□□□□□ -1.6
TSC22D1-203ENST00000458659 MT1HP80294 61 aa5.02□□□□□ -1.61
TSC22D1-203ENST00000458659 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
TSC22D1-203ENST00000458659 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
TSC22D1-203ENST00000458659 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
TSC22D1-203ENST00000458659 KRTAP19-2Q3LHN2 52 aa4.91□□□□□ -1.62
TSC22D1-203ENST00000458659 FAT4Q6V0I7 4981 aa4.91□□□□□ -1.62
TSC22D1-203ENST00000458659 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.62
TSC22D1-203ENST00000458659 MT1XP80297 61 aa4.83□□□□□ -1.64
TSC22D1-203ENST00000458659 FLGP20930 4061 aaPredicted RBP4.83□□□□□ -1.64
TSC22D1-203ENST00000458659 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
TSC22D1-203ENST00000458659 KRTAP10-5P60370 271 aa4.81□□□□□ -1.64
TSC22D1-203ENST00000458659 LCE2CQ5TA81 110 aa4.79□□□□□ -1.64
TSC22D1-203ENST00000458659 RNF213Q63HN8 5207 aa4.78□□□□□ -1.64
TSC22D1-203ENST00000458659 MT1BP07438 61 aa4.76□□□□□ -1.65
TSC22D1-203ENST00000458659 UBR4Q5T4S7 5183 aa4.74□□□□□ -1.65
TSC22D1-203ENST00000458659 HERC1Q15751 4861 aa4.72□□□□□ -1.65
TSC22D1-203ENST00000458659 PCLOQ9Y6V0 5065 aa4.72□□□□□ -1.65
TSC22D1-203ENST00000458659 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.65
TSC22D1-203ENST00000458659 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
TSC22D1-203ENST00000458659 KRTAP4-8A0A0G2JLE6 195 aa4.69□□□□□ -1.66
TSC22D1-203ENST00000458659 KRTAP4-8Q9BYQ9 185 aa4.69□□□□□ -1.66
TSC22D1-203ENST00000458659 HMCN2Q8NDA2 5059 aa4.68□□□□□ -1.66
TSC22D1-203ENST00000458659 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
TSC22D1-203ENST00000458659 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
TSC22D1-203ENST00000458659 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
TSC22D1-203ENST00000458659 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
TSC22D1-203ENST00000458659 KRTAP9-2Q9BYQ4 174 aa4.5□□□□□ -1.69
TSC22D1-203ENST00000458659 KMT2DO14686 5537 aa4.47□□□□□ -1.69
TSC22D1-203ENST00000458659 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
TSC22D1-203ENST00000458659 KRTAP9-6A0A140TA67 174 aa4.43□□□□□ -1.7
TSC22D1-203ENST00000458659 MT1GP13640 62 aa4.42□□□□□ -1.7
TSC22D1-203ENST00000458659 USH2AO75445 5202 aa4.4□□□□□ -1.71
TSC22D1-203ENST00000458659 LCE2BO14633 110 aa4.38□□□□□ -1.71
TSC22D1-203ENST00000458659 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
TSC22D1-203ENST00000458659 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
TSC22D1-203ENST00000458659 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
TSC22D1-203ENST00000458659 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
TSC22D1-203ENST00000458659 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms