RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 NAA38Q9BRA0 125 aaKnown RBP7.01□□□□□ -1.29
UBE2D4-209ENST00000454428 PYY3Q5JQD4 70 aa6.98□□□□□ -1.29
UBE2D4-209ENST00000454428 A8MUN3 132 aa6.96□□□□□ -1.3
UBE2D4-209ENST00000454428 UQCR10Q9UDW1 63 aa6.96□□□□□ -1.3
UBE2D4-209ENST00000454428 H0YAA0 97 aa6.95□□□□□ -1.3
UBE2D4-209ENST00000454428 PLAC4Q8WY50 150 aa6.93□□□□□ -1.3
UBE2D4-209ENST00000454428 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
UBE2D4-209ENST00000454428 KRTAP4-9Q9BYQ8 210 aa6.91□□□□□ -1.3
UBE2D4-209ENST00000454428 KRTAP10-12P60413 245 aa6.86□□□□□ -1.31
UBE2D4-209ENST00000454428 ADM2Q7Z4H4 148 aa6.86□□□□□ -1.31
UBE2D4-209ENST00000454428 CYP4F30PQ9H0H9 118 aa6.83□□□□□ -1.32
UBE2D4-209ENST00000454428 NDUFC1O43677 76 aa6.79□□□□□ -1.32
UBE2D4-209ENST00000454428 TP53AIP1Q9HCN2 124 aa6.78□□□□□ -1.32
UBE2D4-209ENST00000454428 H3BT86 120 aa6.76□□□□□ -1.33
UBE2D4-209ENST00000454428 K7EP34 96 aa6.74□□□□□ -1.33
UBE2D4-209ENST00000454428 HMCN1Q96RW7 5635 aa6.72□□□□□ -1.33
UBE2D4-209ENST00000454428 M0R143 59 aa6.71□□□□□ -1.34
UBE2D4-209ENST00000454428 AHNAK2Q8IVF2 5795 aa6.7□□□□□ -1.34
UBE2D4-209ENST00000454428 TSTD3H0UI37 97 aa6.69□□□□□ -1.34
UBE2D4-209ENST00000454428 R4GN34 69 aa6.69□□□□□ -1.34
UBE2D4-209ENST00000454428 P0C880 135 aa6.68□□□□□ -1.34
UBE2D4-209ENST00000454428 LCE1DQ5T752 114 aa6.67□□□□□ -1.34
UBE2D4-209ENST00000454428 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
UBE2D4-209ENST00000454428 M0QZ58 72 aa6.63□□□□□ -1.35
UBE2D4-209ENST00000454428 UBL5Q9BZL1 73 aa6.63□□□□□ -1.35
UBE2D4-209ENST00000454428 LOC101927531A0A1B0GV80 90 aa6.62□□□□□ -1.35
UBE2D4-209ENST00000454428 TRAV22A0A0B4J277 110 aa6.59□□□□□ -1.35
UBE2D4-209ENST00000454428 LINC01554Q52M75 96 aa6.57□□□□□ -1.36
UBE2D4-209ENST00000454428 ACYP1P07311 99 aa6.54□□□□□ -1.36
UBE2D4-209ENST00000454428 A0A1W2PPM0 123 aa6.53□□□□□ -1.36
UBE2D4-209ENST00000454428 KRTAP5-10Q6L8G5 202 aa6.53□□□□□ -1.36
UBE2D4-209ENST00000454428 KRTAP3-2Q9BYR7 98 aa6.53□□□□□ -1.36
UBE2D4-209ENST00000454428 C9orf118A6NHY6 69 aa6.52□□□□□ -1.37
UBE2D4-209ENST00000454428 C20orf197Q8N268 126 aa6.5□□□□□ -1.37
UBE2D4-209ENST00000454428 SPCS1Q9Y6A9 102 aa6.5□□□□□ -1.37
UBE2D4-209ENST00000454428 MT4P47944 62 aa6.49□□□□□ -1.37
UBE2D4-209ENST00000454428 KRTAP19-7Q3SYF9 63 aa6.49□□□□□ -1.37
UBE2D4-209ENST00000454428 KRTAP19-3Q7Z4W3 81 aa6.49□□□□□ -1.37
UBE2D4-209ENST00000454428 BATFQ16520 125 aa6.48□□□□□ -1.37
UBE2D4-209ENST00000454428 TAX1BP3O14907 124 aa6.47□□□□□ -1.37
UBE2D4-209ENST00000454428 MT1EP04732 61 aa6.45□□□□□ -1.38
UBE2D4-209ENST00000454428 LCE4AQ5TA78 99 aa6.44□□□□□ -1.38
UBE2D4-209ENST00000454428 H0Y9P7 68 aa6.4□□□□□ -1.38
UBE2D4-209ENST00000454428 CYSTM1Q9H1C7 97 aa6.38□□□□□ -1.39
UBE2D4-209ENST00000454428 PRO0461Q9UI25 63 aa6.37□□□□□ -1.39
UBE2D4-209ENST00000454428 TMA7Q9Y2S6 64 aaKnown RBP6.37□□□□□ -1.39
UBE2D4-209ENST00000454428 ATOX1O00244 68 aa6.36□□□□□ -1.39
UBE2D4-209ENST00000454428 UQCRQO14949 82 aa6.35□□□□□ -1.39
UBE2D4-209ENST00000454428 KRTAP5-7Q6L8G8 165 aa6.34□□□□□ -1.39
UBE2D4-209ENST00000454428 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
UBE2D4-209ENST00000454428 KRTAP5-4Q6L8H1 288 aa6.28□□□□□ -1.4
UBE2D4-209ENST00000454428 MT-ATP8P03928 68 aa6.25□□□□□ -1.41
UBE2D4-209ENST00000454428 MT1GP13640 62 aa6.25□□□□□ -1.41
UBE2D4-209ENST00000454428 LINC00208Q96KT6 92 aa6.24□□□□□ -1.41
UBE2D4-209ENST00000454428 KRTAP5-3Q6L8H2 238 aa6.21□□□□□ -1.42
UBE2D4-209ENST00000454428 SMIM6P0DI80 62 aa6.18□□□□□ -1.42
UBE2D4-209ENST00000454428 MT1MQ8N339 61 aa6.18□□□□□ -1.42
UBE2D4-209ENST00000454428 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
UBE2D4-209ENST00000454428 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
UBE2D4-209ENST00000454428 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
UBE2D4-209ENST00000454428 HIST1H4AP62805 103 aaKnown RBP6.12□□□□□ -1.43
UBE2D4-209ENST00000454428 KRTAP4-3Q9BYR4 195 aa6.11□□□□□ -1.43
UBE2D4-209ENST00000454428 ETDBQ3ZM63 59 aa6.07□□□□□ -1.44
UBE2D4-209ENST00000454428 MT1LQ93083 61 aa6.06□□□□□ -1.44
UBE2D4-209ENST00000454428 SPRR5A0A1B0GTR4 108 aa6.04□□□□□ -1.44
UBE2D4-209ENST00000454428 MP68P56378 58 aa6.04□□□□□ -1.44
UBE2D4-209ENST00000454428 ATP5EP2Q5VTU8 51 aa6.04□□□□□ -1.44
UBE2D4-209ENST00000454428 OCR1Q9BZK8 76 aa6.04□□□□□ -1.44
UBE2D4-209ENST00000454428 CAMK2N1Q7Z7J9 78 aa6.03□□□□□ -1.44
UBE2D4-209ENST00000454428 KRTAP13-4Q3LI77 160 aa6.01□□□□□ -1.45
UBE2D4-209ENST00000454428 A0A0D9SG42 100 aa6□□□□□ -1.45
UBE2D4-209ENST00000454428 F8W1H4 67 aa5.98□□□□□ -1.45
UBE2D4-209ENST00000454428 TRAV7A0A075B6U4 112 aa5.97□□□□□ -1.45
UBE2D4-209ENST00000454428 KRTAP20-2Q3LI61 65 aa5.95□□□□□ -1.46
UBE2D4-209ENST00000454428 COL5A1-AS1Q5SY13 56 aa5.94□□□□□ -1.46
UBE2D4-209ENST00000454428 FAM240AA0A1B0GVK7 77 aa5.89□□□□□ -1.47
UBE2D4-209ENST00000454428 H3BPC8 53 aa5.89□□□□□ -1.47
UBE2D4-209ENST00000454428 GTF2H5Q6ZYL4 71 aa5.89□□□□□ -1.47
UBE2D4-209ENST00000454428 ACYP2P14621 99 aa5.83□□□□□ -1.48
UBE2D4-209ENST00000454428 SPTSSBQ8NFR3 76 aa5.83□□□□□ -1.48
UBE2D4-209ENST00000454428 LINC00643Q86TS7 51 aa5.78□□□□□ -1.48
UBE2D4-209ENST00000454428 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
UBE2D4-209ENST00000454428 KRTAP5-5Q701N2 237 aaPredicted RBP5.76□□□□□ -1.49
UBE2D4-209ENST00000454428 C10orf95Q9H7T3 257 aa5.73□□□□□ -1.49
UBE2D4-209ENST00000454428 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
UBE2D4-209ENST00000454428 LOC105371267A0A1B0GV96 52 aa5.71□□□□□ -1.5
UBE2D4-209ENST00000454428 CHKB-CPT1BH3BT56 60 aa5.68□□□□□ -1.5
UBE2D4-209ENST00000454428 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
UBE2D4-209ENST00000454428 AHNAKQ09666 5890 aaKnown RBP5.66□□□□□ -1.5
UBE2D4-209ENST00000454428 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
UBE2D4-209ENST00000454428 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
UBE2D4-209ENST00000454428 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
UBE2D4-209ENST00000454428 MUC5BQ9HC84 5762 aaPredicted RBP5.59□□□□□ -1.51
UBE2D4-209ENST00000454428 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
UBE2D4-209ENST00000454428 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
UBE2D4-209ENST00000454428 SCGB1A1P11684 91 aa5.55□□□□□ -1.52
UBE2D4-209ENST00000454428 SPATA8Q6RVD6 105 aa5.55□□□□□ -1.52
UBE2D4-209ENST00000454428 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
UBE2D4-209ENST00000454428 KRTAP5-8O75690 187 aa5.44□□□□□ -1.54
UBE2D4-209ENST00000454428 KRTAP12-3P60328 96 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms